| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609419
Identifier: 120609419
GI number: 120609419
Start: 777364
End: 777630
Strand: Direct
Name: 120609419
Synonym: Aave_0723
Alternate gene names: NA
Gene position: 777364-777630 (Clockwise)
Preceding gene: 120609418
Following gene: 120609420
Centisome position: 14.52
GC content: 61.05
Gene sequence:
>267_bases ATGAAGCGATCTATCCCTTTGTTACTGGTTGCTGCACTCGCGGCCTGCGGCCCGTCCGAGCCACCGAAGGAGCAAGCCAA TGTGCCTACCGTCGAAGAACTGGCTGCCGCCCCTGAACGATTGAAGGAGCTGCGCCGCCAATGCAAGACCGAGCGTCCGA CGATGGGCGATGTGCTGTGCAACCGCGTGGCCGAAGCAACGAACAAGCGCTTCTTCGGAGACGGCAAGGTGCCTTACACG CTATCGGAGACGCCGCCGAAGTTCTGA
Upstream 100 bases:
>100_bases TGCTGTCTCGATTCATCGAAAGGGTGCACGCCATCGACTTGCCAGAAGGAGCGAGGCTAGCACAACCACCTGAATCCAAT CCTCCTGAGGACACCGAGCC
Downstream 100 bases:
>100_bases CCGTTGGCGGTTTGCCGCATATCCTGATTTTCTTTCTCGACACGCCGCAGCGCGCTCAAGCCTGCGGCGTTTTTACTGGT TTCGTCCCTGCATGAAACCA
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MKRSIPLLLVAALAACGPSEPPKEQANVPTVEELAAAPERLKELRRQCKTERPTMGDVLCNRVAEATNKRFFGDGKVPYT LSETPPKF
Sequences:
>Translated_88_residues MKRSIPLLLVAALAACGPSEPPKEQANVPTVEELAAAPERLKELRRQCKTERPTMGDVLCNRVAEATNKRFFGDGKVPYT LSETPPKF >Mature_88_residues MKRSIPLLLVAALAACGPSEPPKEQANVPTVEELAAAPERLKELRRQCKTERPTMGDVLCNRVAEATNKRFFGDGKVPYT LSETPPKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9680; Mature: 9680
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRSIPLLLVAALAACGPSEPPKEQANVPTVEELAAAPERLKELRRQCKTERPTMGDVLC CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCHHHHHH NRVAEATNKRFFGDGKVPYTLSETPPKF HHHHHHHCCCCCCCCCCCEECCCCCCCC >Mature Secondary Structure MKRSIPLLLVAALAACGPSEPPKEQANVPTVEELAAAPERLKELRRQCKTERPTMGDVLC CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCHHHHHH NRVAEATNKRFFGDGKVPYTLSETPPKF HHHHHHHCCCCCCCCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA