| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609407
Identifier: 120609407
GI number: 120609407
Start: 767563
End: 767895
Strand: Reverse
Name: 120609407
Synonym: Aave_0711
Alternate gene names: NA
Gene position: 767895-767563 (Counterclockwise)
Preceding gene: 120609408
Following gene: 120609406
Centisome position: 14.35
GC content: 66.67
Gene sequence:
>333_bases GTGATCCGCGTCGACGCTGTGTGGCTGGCGGTCGATCCGCTGGACATGCGAGCGGGCACCGAGGCCGCACTCACCCGTGT GGTCAATGTGTTCGGCGCGGCCAGACCACATCACGCCTACCTCTTCGCTAACCGTCGCGCCAACCGCATGAAGGTCCTGG TGCACGACGGAATCGGCGTGTGGCTTGCAGCTCGCCGCCTCAATAGTGGCCGGTTTGCCTGGCCCCGTGATGTCGGCGGG ACGCTGACGCTCACGACCGAGCAACTCAGCGCACTCGTCCTCGGTCTGCCTTGGCAGCGCTTGGGCGACGCCGGCGTCAT CACCCTGCTGTAG
Upstream 100 bases:
>100_bases CAGTTGAGCTCGAACTGCGCCGCGGCGCGGTCGCCATCAAGATGCTTTGGCCAATGGATGCCACGGCTGAGCTGAGCGCC TTCACCCGAGAGTTGCTGCG
Downstream 100 bases:
>100_bases TCAGCAATTGCGGCATCCACCGATGGCGTGTGAGCGCCGTCGTCGGCACGATCAGTCCCCGTGATCGCTGACGACGCCAT CGACAGTCTTGATGCCAACC
Product: IS66 Orf2 family protein
Products: NA
Alternate protein names: Transposase; IS66 Orf2 Like; LOW QUALITY PROTEIN Transposase; Transposase Number 2 For Insertion Sequence; Transposition Helper Protein; IS66 Family Transposase; Transposase Component; IS66 Orf2 Like Protein; Is66 Orf2 Family Protein; Transposase TnpB Protein
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MIRVDAVWLAVDPLDMRAGTEAALTRVVNVFGAARPHHAYLFANRRANRMKVLVHDGIGVWLAARRLNSGRFAWPRDVGG TLTLTTEQLSALVLGLPWQRLGDAGVITLL
Sequences:
>Translated_110_residues MIRVDAVWLAVDPLDMRAGTEAALTRVVNVFGAARPHHAYLFANRRANRMKVLVHDGIGVWLAARRLNSGRFAWPRDVGG TLTLTTEQLSALVLGLPWQRLGDAGVITLL >Mature_110_residues MIRVDAVWLAVDPLDMRAGTEAALTRVVNVFGAARPHHAYLFANRRANRMKVLVHDGIGVWLAARRLNSGRFAWPRDVGG TLTLTTEQLSALVLGLPWQRLGDAGVITLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12083; Mature: 12083
Theoretical pI: Translated: 11.83; Mature: 11.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRVDAVWLAVDPLDMRAGTEAALTRVVNVFGAARPHHAYLFANRRANRMKVLVHDGIGV CEEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEECCCCE WLAARRLNSGRFAWPRDVGGTLTLTTEQLSALVLGLPWQRLGDAGVITLL EEEEEECCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCHHHCCCCEEEEEC >Mature Secondary Structure MIRVDAVWLAVDPLDMRAGTEAALTRVVNVFGAARPHHAYLFANRRANRMKVLVHDGIGV CEEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEECCCCE WLAARRLNSGRFAWPRDVGGTLTLTTEQLSALVLGLPWQRLGDAGVITLL EEEEEECCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCHHHCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA