| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609380
Identifier: 120609380
GI number: 120609380
Start: 744541
End: 745023
Strand: Direct
Name: 120609380
Synonym: Aave_0683
Alternate gene names: NA
Gene position: 744541-745023 (Clockwise)
Preceding gene: 120609378
Following gene: 120609381
Centisome position: 13.91
GC content: 65.42
Gene sequence:
>483_bases TTGTGCTTGTACGGATTCGATGGCTTGCGCATCCGTACTTGCTCACGAAAGCACGCATCCGGCTTCGCGGTTCCGTGCTT CGGGGCAAAAGCGTGTTCGTGCAACCTTCTTGGCTTTGCGGAATTTCTGACCGTGACCCAGCCGTTGACCACCGCAGATG AACGCGCGCAACTGCTCGCCAACGGCGCGGCGCGCGCCGCCGGCCAAGGCATCGACCCAATGCCCGTGGTGCGGCTGTTC ACACCGGACGCGCACGCGACCTGGTTGCTGGTATCGCTCGATCCCGCCGATGGCGACACGGCCTACGGCCTGATCGATCT CGGTATCGGGATGCCCGCGCTCGGGACGGTCAAGCTGTCCGACCTTACCGGCATCGTCGGGCCGCGCAAGCTGCCGGTGC GGCGGGATCGGTATTTCCAGGCGGTGCGCCCGCTGTCGGCGTATGTCCGGCTGGCGCAGGAGAACGGCTCGATCACGGAC TGA
Upstream 100 bases:
>100_bases GTATTCGTGCCTTTACGGAAATCCGCATCGGCGGATTTCGACAGAATCAGGGAACCGTATCCGTGCCTTTCCTGACCTTC ACAATTCCGTTTCTGCGTTC
Downstream 100 bases:
>100_bases TGAAAGCCAGCGCAGCCCGGCCAGCCGGGGCGCATTGAGACTATTTCAGTCTTGGTCAAGACCGGACAGGTCTGAATCGG CATTGATGCACCGAAGCGGT
Product: putative lipoprotein
Products: NA
Alternate protein names: Transposon
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MCLYGFDGLRIRTCSRKHASGFAVPCFGAKACSCNLLGFAEFLTVTQPLTTADERAQLLANGAARAAGQGIDPMPVVRLF TPDAHATWLLVSLDPADGDTAYGLIDLGIGMPALGTVKLSDLTGIVGPRKLPVRRDRYFQAVRPLSAYVRLAQENGSITD
Sequences:
>Translated_160_residues MCLYGFDGLRIRTCSRKHASGFAVPCFGAKACSCNLLGFAEFLTVTQPLTTADERAQLLANGAARAAGQGIDPMPVVRLF TPDAHATWLLVSLDPADGDTAYGLIDLGIGMPALGTVKLSDLTGIVGPRKLPVRRDRYFQAVRPLSAYVRLAQENGSITD >Mature_160_residues MCLYGFDGLRIRTCSRKHASGFAVPCFGAKACSCNLLGFAEFLTVTQPLTTADERAQLLANGAARAAGQGIDPMPVVRLF TPDAHATWLLVSLDPADGDTAYGLIDLGIGMPALGTVKLSDLTGIVGPRKLPVRRDRYFQAVRPLSAYVRLAQENGSITD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17055; Mature: 17055
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCLYGFDGLRIRTCSRKHASGFAVPCFGAKACSCNLLGFAEFLTVTQPLTTADERAQLLA CEEECCCCCEEEECCCCCCCCCEEECCCCCCCEECHHHHHHHHHHCCCCCCHHHHHHHHH NGAARAAGQGIDPMPVVRLFTPDAHATWLLVSLDPADGDTAYGLIDLGIGMPALGTVKLS CCCHHHCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCEEEEC DLTGIVGPRKLPVRRDRYFQAVRPLSAYVRLAQENGSITD CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MCLYGFDGLRIRTCSRKHASGFAVPCFGAKACSCNLLGFAEFLTVTQPLTTADERAQLLA CEEECCCCCEEEECCCCCCCCCEEECCCCCCCEECHHHHHHHHHHCCCCCCHHHHHHHHH NGAARAAGQGIDPMPVVRLFTPDAHATWLLVSLDPADGDTAYGLIDLGIGMPALGTVKLS CCCHHHCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCEEEEC DLTGIVGPRKLPVRRDRYFQAVRPLSAYVRLAQENGSITD CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA