| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120609267
Identifier: 120609267
GI number: 120609267
Start: 613447
End: 614331
Strand: Reverse
Name: 120609267
Synonym: Aave_0566
Alternate gene names: NA
Gene position: 614331-613447 (Counterclockwise)
Preceding gene: 120609268
Following gene: 120609266
Centisome position: 11.48
GC content: 68.36
Gene sequence:
>885_bases ATGAGTGCGCCCACAGCCCGCGGCGCAACGGCGGCACCACTGGTGGTCTCCATCGTCTCCACCAAGGGCGGCGTCGGCAA GACGACCACAGCCGCCAACCTCGGGGGCTTTCTGGCGGATGCCGGCATGCGCGTGCTGCTGCTCGACCTGGACATACAGC CCACGCTGTCGAGCTACTTCCCCCTCGACCGCCGCGCGCCGGGCGGCATCTACGAACTGCTCGCCTTCAACGAGCAGGAT CCCGGGCAACTGATTTCCTCCACGGCCATCGGCGGCCTGGATCTGCTGCTGTCCAACGATGGGAAAGGCCAGTTGGGCAC CCTGCTGCTGCACGCCGCGGACGGCAGGCTGCGGCTGCGCAACCTGCTGGGCATGTTCCGGAGCCGGTATGACGTGGTGC TGATCGATACACAGGGAGCGCGCTGCGTCACGTTGGAGATGGCCATCCTGGCGTCGGACTTCTCGCTGTCGCCGGTCACG CCGGAGATCCTGGCAGCGCGCGAATTGCGTCGGGGCACCCTCAGCCTGATGGACGACATCGCGCCGTATCGCCACCTGGG CATCGAGCCACCTCCGCTGCGCCTGCTCATCAATCGAGCCCGCACCGTGTCGGTCAACGGACGGCAGATACAGCATGCCC TGCGCGGGATGTTCCAGCAGGCGTCCGGGATACACGTCCTGGAGACCACGATCCCGGCCATCGAGGCCTATCCCGCGGCG GCGCTGCGCCGGCTTCCCGTGCATCGCGTGGAGCCACGTCGCCCGCGAGGTCGGCTGGCTCCCGCGGCACTGGAGAGCCA GCGCGCGCTCGCGGGAGAACTGTTTCCGATGTGGCGCGACCGATTCGACCATGTGACGGGGCGAAGCCATGCCGGCGCCG CGTGA
Upstream 100 bases:
>100_bases TGAAGGAGAAGAAGTTCCCACAGCGCGTGCGGCTGGGCGTGCGCGCTGTGGGCTGGTACGAGGATGAGATCGATCAGTGG CTCGCCCAGCGGGAGCGTGC
Downstream 100 bases:
>100_bases CCGCCGGCTTGCGAGTGCGGCGTTGCTGCGCCTGATCGCGTTCGCGCGGGCGGACGGCTGGGTGCCGGTCTTCGCGAACG GCCGCCTGAAGCGCCTGTGC
Product: cobyrinic acid a,c-diamide synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MSAPTARGATAAPLVVSIVSTKGGVGKTTTAANLGGFLADAGMRVLLLDLDIQPTLSSYFPLDRRAPGGIYELLAFNEQD PGQLISSTAIGGLDLLLSNDGKGQLGTLLLHAADGRLRLRNLLGMFRSRYDVVLIDTQGARCVTLEMAILASDFSLSPVT PEILAARELRRGTLSLMDDIAPYRHLGIEPPPLRLLINRARTVSVNGRQIQHALRGMFQQASGIHVLETTIPAIEAYPAA ALRRLPVHRVEPRRPRGRLAPAALESQRALAGELFPMWRDRFDHVTGRSHAGAA
Sequences:
>Translated_294_residues MSAPTARGATAAPLVVSIVSTKGGVGKTTTAANLGGFLADAGMRVLLLDLDIQPTLSSYFPLDRRAPGGIYELLAFNEQD PGQLISSTAIGGLDLLLSNDGKGQLGTLLLHAADGRLRLRNLLGMFRSRYDVVLIDTQGARCVTLEMAILASDFSLSPVT PEILAARELRRGTLSLMDDIAPYRHLGIEPPPLRLLINRARTVSVNGRQIQHALRGMFQQASGIHVLETTIPAIEAYPAA ALRRLPVHRVEPRRPRGRLAPAALESQRALAGELFPMWRDRFDHVTGRSHAGAA >Mature_293_residues SAPTARGATAAPLVVSIVSTKGGVGKTTTAANLGGFLADAGMRVLLLDLDIQPTLSSYFPLDRRAPGGIYELLAFNEQDP GQLISSTAIGGLDLLLSNDGKGQLGTLLLHAADGRLRLRNLLGMFRSRYDVVLIDTQGARCVTLEMAILASDFSLSPVTP EILAARELRRGTLSLMDDIAPYRHLGIEPPPLRLLINRARTVSVNGRQIQHALRGMFQQASGIHVLETTIPAIEAYPAAA LRRLPVHRVEPRRPRGRLAPAALESQRALAGELFPMWRDRFDHVTGRSHAGAA
Specific function: Unknown
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis soj [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 31669; Mature: 31538
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPTARGATAAPLVVSIVSTKGGVGKTTTAANLGGFLADAGMRVLLLDLDIQPTLSSYF CCCCCCCCCCCCHHHEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHC PLDRRAPGGIYELLAFNEQDPGQLISSTAIGGLDLLLSNDGKGQLGTLLLHAADGRLRLR CCCCCCCCCCEEHEECCCCCHHHHHHHHCCCCEEEEEECCCCCCEEEEEEEECCCHHHHH NLLGMFRSRYDVVLIDTQGARCVTLEMAILASDFSLSPVTPEILAARELRRGTLSLMDDI HHHHHHHCCCCEEEEECCCCEEEEEEEEEHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH APYRHLGIEPPPLRLLINRARTVSVNGRQIQHALRGMFQQASGIHVLETTIPAIEAYPAA HHHHHCCCCCCHHHHHEECCEEEECCHHHHHHHHHHHHHHCCCCEEEEHHCCHHHHHHHH ALRRLPVHRVEPRRPRGRLAPAALESQRALAGELFPMWRDRFDHVTGRSHAGAA HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SAPTARGATAAPLVVSIVSTKGGVGKTTTAANLGGFLADAGMRVLLLDLDIQPTLSSYF CCCCCCCCCCCHHHEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHC PLDRRAPGGIYELLAFNEQDPGQLISSTAIGGLDLLLSNDGKGQLGTLLLHAADGRLRLR CCCCCCCCCCEEHEECCCCCHHHHHHHHCCCCEEEEEECCCCCCEEEEEEEECCCHHHHH NLLGMFRSRYDVVLIDTQGARCVTLEMAILASDFSLSPVTPEILAARELRRGTLSLMDDI HHHHHHHCCCCEEEEECCCCEEEEEEEEEHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH APYRHLGIEPPPLRLLINRARTVSVNGRQIQHALRGMFQQASGIHVLETTIPAIEAYPAA HHHHHCCCCCCHHHHHEECCEEEECCHHHHHHHHHHHHHHCCCCEEEEHHCCHHHHHHHH ALRRLPVHRVEPRRPRGRLAPAALESQRALAGELFPMWRDRFDHVTGRSHAGAA HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12534463 [H]