| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609266
Identifier: 120609266
GI number: 120609266
Start: 611602
End: 613227
Strand: Reverse
Name: 120609266
Synonym: Aave_0565
Alternate gene names: NA
Gene position: 613227-611602 (Counterclockwise)
Preceding gene: 120609267
Following gene: 120609265
Centisome position: 11.46
GC content: 69.86
Gene sequence:
>1626_bases ATGACACAGGCAGGCCCACACGACATCGCGAGCCAGCTGCTCTCGGAGACGTTCGAGCGCAGCGGTCGCTCCGCGCAAGC TCTGACCGACCCGATCGCGGACACGCCGATGGTGGTCACGCTGGACCAGCTGCGGCCCTACGACCTCAATCCGCGCGTCA CCGTCAACCCGCTATACCCCGAGATCAAGGCGTCGATCCGCGAGCGAGGACTGGACGCCGCCCCCGCCATCACGCGGCGG CCGGGTGCGGCCCACTACATGATCCGCAACGGCGGCAACACGCGGCTGGCTATCCTTCGCGAGCTGTGGGCGGAAACCAA GGACGAGCGGTTCTTCCGCATTCCCTGCCTGTTCCGCCCGTGGCCCGAGCGCGGAGAAATCATCGCGCTCACGGGCCACC TGGCGGAGGGGGAGCTCCATGGGAAGCTGACATTCATCGAACGAGCCCTGGGCGTGGAGAAGGCCCGGGAGCTCTACGAG AGCGAGAACGGCGGCAAACCCATCAGCCAGATGGAGCTGGCCCGTCGGCTGGCAGCGGACGGCTACCCCGTGCCGCAACC CCACATCAGCCGCATGCGCGACGCGGTGCAGTACCTGCTGCCCGCGATTCCCTCGGTGCTGTACGCCGGCATGGGGCGCC ACCAGGTGGAGCGACTGTCGCTGCTGCGGCGCGGTGCCGAGCAGGCCTGGGCGCAGCGCGCCTCCGCCGATGCGATCGCG TTCGCCGATCTCTTTCAGGACGTCCTTTCGGGATTCGACGTCGCACCCGAAGAATTCTCGTTTGACCGGGTACGGGACGA GCTGATCGGCCAGATGGCACAAGTGCTGGGCGCCGACTACGATGTGCTCGCGCTGGACATCGCCGGGCTGGAGGGCCGGC AGCGGGTGCTGCTCAGCGCCCCTTCCCCGTCCGCGCCACCGGTGGCCACGCCGCCCCGGGGCGCAACGCAGGAGCGGGCG CCTCGGCCGACATCGCCTGGGACCGCGCCTGGCGGCGCCGCCGCCCGGCCTGCCGACCCGATCAGCGTTCCACCCGAAAC GACCGAAACGGCCGCGGGCGAATCGACGCGGCCCACATCGAACCCCACGGACGAGCGCACGGCATCGCCCGCTCCCACGA CAGAGCGCCTGCAGTCGATCCAGAAGCTGGTCGCGGACCACCACGGCGAGCCGGCGCACTCGTTCGCTGACAACGTGGTG CATGCCATTCCGGTGCAGGCGGGCGGCCTCTACCCCATCACCGATCTGTGGCACATCGATCCGGGCCTGGATACGCCGGA CCGGCTGCGCGTGCATATCGCCCAATTCGCGCGGGAGATCGCCGCCGAGGGCGGCGCGGCCGACAGTGTGGAGGGTTCAG AGCGTGGCATCGGCTACACGTGCGCAGCGCCAACTACACACACGCCAGCCGACAATCCCTTCGCCAGGGCCATGCTGTCG ATTCTGCAGGCGCTGTCCGGCGTGCCGTCAGCACCCGAGCCGCTGACCGATGCGCTCGGCCCGCTGCTGCGCGGCAACGA AGCCATCGCCCGGCTCAGCGACAGCGGGCTCGTGAAGCTGTTCCGGCTGATCCGCCTCGCGCGACGGCTCTCGGACACCC AACCCGGCGCCGGGGCGATGCCATGA
Upstream 100 bases:
>100_bases TCCACCTGGGTGCGCCCGAAGCGCTCCGCAGTGGGAGCACTGTGCCCGGGCGCGCCGGGGCGGATGATGGGCATCGCACC GATGACGGACAGGTGCGGCG
Downstream 100 bases:
>100_bases CCACGCCCCATCCGCTGAACCAGGCCGTGATCGCGCAGGCGCTGCATGACTTGCGCAACGGACAACTGCGCCGTGCCCGC TCGATGGGCTTCGGCGATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 541; Mature: 540
Protein sequence:
>541_residues MTQAGPHDIASQLLSETFERSGRSAQALTDPIADTPMVVTLDQLRPYDLNPRVTVNPLYPEIKASIRERGLDAAPAITRR PGAAHYMIRNGGNTRLAILRELWAETKDERFFRIPCLFRPWPERGEIIALTGHLAEGELHGKLTFIERALGVEKARELYE SENGGKPISQMELARRLAADGYPVPQPHISRMRDAVQYLLPAIPSVLYAGMGRHQVERLSLLRRGAEQAWAQRASADAIA FADLFQDVLSGFDVAPEEFSFDRVRDELIGQMAQVLGADYDVLALDIAGLEGRQRVLLSAPSPSAPPVATPPRGATQERA PRPTSPGTAPGGAAARPADPISVPPETTETAAGESTRPTSNPTDERTASPAPTTERLQSIQKLVADHHGEPAHSFADNVV HAIPVQAGGLYPITDLWHIDPGLDTPDRLRVHIAQFAREIAAEGGAADSVEGSERGIGYTCAAPTTHTPADNPFARAMLS ILQALSGVPSAPEPLTDALGPLLRGNEAIARLSDSGLVKLFRLIRLARRLSDTQPGAGAMP
Sequences:
>Translated_541_residues MTQAGPHDIASQLLSETFERSGRSAQALTDPIADTPMVVTLDQLRPYDLNPRVTVNPLYPEIKASIRERGLDAAPAITRR PGAAHYMIRNGGNTRLAILRELWAETKDERFFRIPCLFRPWPERGEIIALTGHLAEGELHGKLTFIERALGVEKARELYE SENGGKPISQMELARRLAADGYPVPQPHISRMRDAVQYLLPAIPSVLYAGMGRHQVERLSLLRRGAEQAWAQRASADAIA FADLFQDVLSGFDVAPEEFSFDRVRDELIGQMAQVLGADYDVLALDIAGLEGRQRVLLSAPSPSAPPVATPPRGATQERA PRPTSPGTAPGGAAARPADPISVPPETTETAAGESTRPTSNPTDERTASPAPTTERLQSIQKLVADHHGEPAHSFADNVV HAIPVQAGGLYPITDLWHIDPGLDTPDRLRVHIAQFAREIAAEGGAADSVEGSERGIGYTCAAPTTHTPADNPFARAMLS ILQALSGVPSAPEPLTDALGPLLRGNEAIARLSDSGLVKLFRLIRLARRLSDTQPGAGAMP >Mature_540_residues TQAGPHDIASQLLSETFERSGRSAQALTDPIADTPMVVTLDQLRPYDLNPRVTVNPLYPEIKASIRERGLDAAPAITRRP GAAHYMIRNGGNTRLAILRELWAETKDERFFRIPCLFRPWPERGEIIALTGHLAEGELHGKLTFIERALGVEKARELYES ENGGKPISQMELARRLAADGYPVPQPHISRMRDAVQYLLPAIPSVLYAGMGRHQVERLSLLRRGAEQAWAQRASADAIAF ADLFQDVLSGFDVAPEEFSFDRVRDELIGQMAQVLGADYDVLALDIAGLEGRQRVLLSAPSPSAPPVATPPRGATQERAP RPTSPGTAPGGAAARPADPISVPPETTETAAGESTRPTSNPTDERTASPAPTTERLQSIQKLVADHHGEPAHSFADNVVH AIPVQAGGLYPITDLWHIDPGLDTPDRLRVHIAQFAREIAAEGGAADSVEGSERGIGYTCAAPTTHTPADNPFARAMLSI LQALSGVPSAPEPLTDALGPLLRGNEAIARLSDSGLVKLFRLIRLARRLSDTQPGAGAMP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58254; Mature: 58123
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQAGPHDIASQLLSETFERSGRSAQALTDPIADTPMVVTLDQLRPYDLNPRVTVNPLYP CCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEEHHCCCCCCCCCCEEECCCCH EIKASIRERGLDAAPAITRRPGAAHYMIRNGGNTRLAILRELWAETKDERFFRIPCLFRP HHHHHHHHCCCCCCCCHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEECCCCCCC WPERGEIIALTGHLAEGELHGKLTFIERALGVEKARELYESENGGKPISQMELARRLAAD CCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC GYPVPQPHISRMRDAVQYLLPAIPSVLYAGMGRHQVERLSLLRRGAEQAWAQRASADAIA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH FADLFQDVLSGFDVAPEEFSFDRVRDELIGQMAQVLGADYDVLALDIAGLEGRQRVLLSA HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEC PSPSAPPVATPPRGATQERAPRPTSPGTAPGGAAARPADPISVPPETTETAAGESTRPTS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCC NPTDERTASPAPTTERLQSIQKLVADHHGEPAHSFADNVVHAIPVQAGGLYPITDLWHID CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEEECCCCCCCCCCHHEECC PGLDTPDRLRVHIAQFAREIAAEGGAADSVEGSERGIGYTCAAPTTHTPADNPFARAMLS CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHH ILQALSGVPSAPEPLTDALGPLLRGNEAIARLSDSGLVKLFRLIRLARRLSDTQPGAGAM HHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC P C >Mature Secondary Structure TQAGPHDIASQLLSETFERSGRSAQALTDPIADTPMVVTLDQLRPYDLNPRVTVNPLYP CCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEEHHCCCCCCCCCCEEECCCCH EIKASIRERGLDAAPAITRRPGAAHYMIRNGGNTRLAILRELWAETKDERFFRIPCLFRP HHHHHHHHCCCCCCCCHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEECCCCCCC WPERGEIIALTGHLAEGELHGKLTFIERALGVEKARELYESENGGKPISQMELARRLAAD CCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC GYPVPQPHISRMRDAVQYLLPAIPSVLYAGMGRHQVERLSLLRRGAEQAWAQRASADAIA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH FADLFQDVLSGFDVAPEEFSFDRVRDELIGQMAQVLGADYDVLALDIAGLEGRQRVLLSA HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEC PSPSAPPVATPPRGATQERAPRPTSPGTAPGGAAARPADPISVPPETTETAAGESTRPTS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCC NPTDERTASPAPTTERLQSIQKLVADHHGEPAHSFADNVVHAIPVQAGGLYPITDLWHID CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEEECCCCCCCCCCHHEECC PGLDTPDRLRVHIAQFAREIAAEGGAADSVEGSERGIGYTCAAPTTHTPADNPFARAMLS CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHH ILQALSGVPSAPEPLTDALGPLLRGNEAIARLSDSGLVKLFRLIRLARRLSDTQPGAGAM HHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC P C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA