| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609256
Identifier: 120609256
GI number: 120609256
Start: 598205
End: 599776
Strand: Reverse
Name: 120609256
Synonym: Aave_0555
Alternate gene names: NA
Gene position: 599776-598205 (Counterclockwise)
Preceding gene: 120609257
Following gene: 120609255
Centisome position: 11.2
GC content: 61.51
Gene sequence:
>1572_bases ATGACAACCATTCGACTTCAGACCAATCAGCACCGCCTGATCGCCAACCTGCGGCACGCCTTCAACCAGCGCTCCATGCT GGGGGAACTGTTGCAGAACGCCCGCCGCGCCCAGGCGAGCGATATCCGCATCTACGTCACCGACGACTGCATTGCCGTCC ACGACAATGGCAGCGGCATCGAAGATCTCCAATCGCTCATCCACATCGCCGAATCAGGCTGGAAGGCCGTCATAAGGGAG CGCGAGAACGCCTTCGGCATGGGAGCGCTCGCCACGCTGTACTTCGCCGAACGGCTGATGGTGCGGTCACGCGGCCAAAC CTTTTCCGCACGAACCGCCGACATCCTTGCCGGAAACCCGATCGAGGTCCTGCCGGCAGATGGCACTTGGCAGGGCACGC AGATCCAGCTCGACGGCGTACGCTCACCAGATCGCCACGTCTTCCTGCCGGACTGGGTGCGCTCGGAAATGCGGCGACTG TGCGAGGCATTCCCGGTCAGGGTGTACGTCAATGATGTCGAAGTCCCCAGGCCCCTGGCAAAGCCCGATATTCGATGGCG TGAGACGTCCATGGGCAAGGTACTGATCGACCTGCATGGCGCCACGAACCAGTGGCGATGCTTCCTCCAGGGGCTGCCCA TCCAGGTGGGAAGCTCGTATGCACCGAAACAGATCGTGCTGCTGCCGGACGACATGGTCGCCAAGCTCCCTGATCGCCAG CATCTGCTGAACGAAACCAGCGATATTCCTCGTATCCAGGCCGCCGTGAATCAAGCCTACCGCCAAGCCTTGATGGACGC GAAGTCCGAGCTGGCCGGTCACGAGTTCGCCGAGTGGTATGCCGACGCATGCGTCATTTCCTCCAACGCCGACCTCCTCA ACGATGTTCCCTTCGTGCCGCGCGCCTGGTTTCGCAACTGGAAAGACCGGCCAGCCGGGGTTTGCCGGTATTGGGAACAT TACGGTGACGACGGAGTGACTTCCGCGGACGCAATGTCGGAAGCCGGGGTCTGGCGGATCGAAGACGATGATGGCGATGT GCTGTTGGCTGAGGTGTTTCTGCAGGCGGCGGACGCCTATTTGTTGGAACAAATCAACCTGGATGCAGGCCACTGGCTTC TTCGTCTGGCACGCCCGCTCAGCGCGGAACAGATCGCGGTCAGAGTCGGTGCATCACGGCATCGGATGGAGCATCCAGGC TTGGCCGACTGGGAGGTCGCTCTGGAGCTCGTCAACTCGCTGCAGGTCGGCCTTCTCGAAGGCGGCGAGCTCTACGATGT CCCAGCCATCCGGAAGGACGGCACGCTGTACGTCACCACAGAGGCATGCAACGTCACGAGGCTGGTCAGCGACTACAGCG TGGACGATCGTTACGACGAAGACCTCGAAAACGACGATGAAGAGACCATCCGGACCTTCATCGCCGTCGGCAGTTCCTCG TCACCGGATCATGTGGTCGAAGCCTTGCTTCCGCGCGCACTGCGCTACGAAGCACAGGCCAAACTGGCAGGTGCCAGCGT GAGGCTCGCCTTCGATGCGGAAGGCAAGTTGGCATCAGTCTCCACCTCCTAG
Upstream 100 bases:
>100_bases ACTTCCCTCCCTACCGGCAAACGCCCTGTTCGCCCGCTCATGCGAGCGGAGGGGCGTGCGCCTGCGTGCGCCAAGGCGCA TTCCATCCAAGGAGCCATCC
Downstream 100 bases:
>100_bases CGGTCGATCCATCACCACGCCACGCAGGCCCCGCACTCCGGTGCGGGGCCTTTTTTTTGGCCGGAATGCGGTCCAGGGCG GCATCGGATTGGCGGACCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 523; Mature: 522
Protein sequence:
>523_residues MTTIRLQTNQHRLIANLRHAFNQRSMLGELLQNARRAQASDIRIYVTDDCIAVHDNGSGIEDLQSLIHIAESGWKAVIRE RENAFGMGALATLYFAERLMVRSRGQTFSARTADILAGNPIEVLPADGTWQGTQIQLDGVRSPDRHVFLPDWVRSEMRRL CEAFPVRVYVNDVEVPRPLAKPDIRWRETSMGKVLIDLHGATNQWRCFLQGLPIQVGSSYAPKQIVLLPDDMVAKLPDRQ HLLNETSDIPRIQAAVNQAYRQALMDAKSELAGHEFAEWYADACVISSNADLLNDVPFVPRAWFRNWKDRPAGVCRYWEH YGDDGVTSADAMSEAGVWRIEDDDGDVLLAEVFLQAADAYLLEQINLDAGHWLLRLARPLSAEQIAVRVGASRHRMEHPG LADWEVALELVNSLQVGLLEGGELYDVPAIRKDGTLYVTTEACNVTRLVSDYSVDDRYDEDLENDDEETIRTFIAVGSSS SPDHVVEALLPRALRYEAQAKLAGASVRLAFDAEGKLASVSTS
Sequences:
>Translated_523_residues MTTIRLQTNQHRLIANLRHAFNQRSMLGELLQNARRAQASDIRIYVTDDCIAVHDNGSGIEDLQSLIHIAESGWKAVIRE RENAFGMGALATLYFAERLMVRSRGQTFSARTADILAGNPIEVLPADGTWQGTQIQLDGVRSPDRHVFLPDWVRSEMRRL CEAFPVRVYVNDVEVPRPLAKPDIRWRETSMGKVLIDLHGATNQWRCFLQGLPIQVGSSYAPKQIVLLPDDMVAKLPDRQ HLLNETSDIPRIQAAVNQAYRQALMDAKSELAGHEFAEWYADACVISSNADLLNDVPFVPRAWFRNWKDRPAGVCRYWEH YGDDGVTSADAMSEAGVWRIEDDDGDVLLAEVFLQAADAYLLEQINLDAGHWLLRLARPLSAEQIAVRVGASRHRMEHPG LADWEVALELVNSLQVGLLEGGELYDVPAIRKDGTLYVTTEACNVTRLVSDYSVDDRYDEDLENDDEETIRTFIAVGSSS SPDHVVEALLPRALRYEAQAKLAGASVRLAFDAEGKLASVSTS >Mature_522_residues TTIRLQTNQHRLIANLRHAFNQRSMLGELLQNARRAQASDIRIYVTDDCIAVHDNGSGIEDLQSLIHIAESGWKAVIRER ENAFGMGALATLYFAERLMVRSRGQTFSARTADILAGNPIEVLPADGTWQGTQIQLDGVRSPDRHVFLPDWVRSEMRRLC EAFPVRVYVNDVEVPRPLAKPDIRWRETSMGKVLIDLHGATNQWRCFLQGLPIQVGSSYAPKQIVLLPDDMVAKLPDRQH LLNETSDIPRIQAAVNQAYRQALMDAKSELAGHEFAEWYADACVISSNADLLNDVPFVPRAWFRNWKDRPAGVCRYWEHY GDDGVTSADAMSEAGVWRIEDDDGDVLLAEVFLQAADAYLLEQINLDAGHWLLRLARPLSAEQIAVRVGASRHRMEHPGL ADWEVALELVNSLQVGLLEGGELYDVPAIRKDGTLYVTTEACNVTRLVSDYSVDDRYDEDLENDDEETIRTFIAVGSSSS PDHVVEALLPRALRYEAQAKLAGASVRLAFDAEGKLASVSTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58456; Mature: 58324
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTIRLQTNQHRLIANLRHAFNQRSMLGELLQNARRAQASDIRIYVTDDCIAVHDNGSGI CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEECCCCCH EDLQSLIHIAESGWKAVIRERENAFGMGALATLYFAERLMVRSRGQTFSARTADILAGNP HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCC IEVLPADGTWQGTQIQLDGVRSPDRHVFLPDWVRSEMRRLCEAFPVRVYVNDVEVPRPLA EEEEECCCCCCCCEEEECCCCCCCCEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCC KPDIRWRETSMGKVLIDLHGATNQWRCFLQGLPIQVGSSYAPKQIVLLPDDMVAKLPDRQ CCCCCEECCCCCEEEEEECCCCCHHHHEEECCCEEECCCCCCCEEEECCHHHHHHCCCHH HLLNETSDIPRIQAAVNQAYRQALMDAKSELAGHEFAEWYADACVISSNADLLNDVPFVP HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEECCCHHHHCCCCCC RAWFRNWKDRPAGVCRYWEHYGDDGVTSADAMSEAGVWRIEDDDGDVLLAEVFLQAADAY HHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCEEEECCCCCEEHHHHHHHHHHHH LLEQINLDAGHWLLRLARPLSAEQIAVRVGASRHRMEHPGLADWEVALELVNSLQVGLLE HHHHHCCCHHHHHHHHHCCCCHHHEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHEEEC GGELYDVPAIRKDGTLYVTTEACNVTRLVSDYSVDDRYDEDLENDDEETIRTFIAVGSSS CCCEEECCCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC SPDHVVEALLPRALRYEAQAKLAGASVRLAFDAEGKLASVSTS CHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEECCCC >Mature Secondary Structure TTIRLQTNQHRLIANLRHAFNQRSMLGELLQNARRAQASDIRIYVTDDCIAVHDNGSGI CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEECCCCCH EDLQSLIHIAESGWKAVIRERENAFGMGALATLYFAERLMVRSRGQTFSARTADILAGNP HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCC IEVLPADGTWQGTQIQLDGVRSPDRHVFLPDWVRSEMRRLCEAFPVRVYVNDVEVPRPLA EEEEECCCCCCCCEEEECCCCCCCCEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCC KPDIRWRETSMGKVLIDLHGATNQWRCFLQGLPIQVGSSYAPKQIVLLPDDMVAKLPDRQ CCCCCEECCCCCEEEEEECCCCCHHHHEEECCCEEECCCCCCCEEEECCHHHHHHCCCHH HLLNETSDIPRIQAAVNQAYRQALMDAKSELAGHEFAEWYADACVISSNADLLNDVPFVP HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEECCCHHHHCCCCCC RAWFRNWKDRPAGVCRYWEHYGDDGVTSADAMSEAGVWRIEDDDGDVLLAEVFLQAADAY HHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCEEEECCCCCEEHHHHHHHHHHHH LLEQINLDAGHWLLRLARPLSAEQIAVRVGASRHRMEHPGLADWEVALELVNSLQVGLLE HHHHHCCCHHHHHHHHHCCCCHHHEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHEEEC GGELYDVPAIRKDGTLYVTTEACNVTRLVSDYSVDDRYDEDLENDDEETIRTFIAVGSSS CCCEEECCCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC SPDHVVEALLPRALRYEAQAKLAGASVRLAFDAEGKLASVSTS CHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA