| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609251
Identifier: 120609251
GI number: 120609251
Start: 594962
End: 595627
Strand: Reverse
Name: 120609251
Synonym: Aave_0550
Alternate gene names: NA
Gene position: 595627-594962 (Counterclockwise)
Preceding gene: 120609252
Following gene: 120609250
Centisome position: 11.13
GC content: 62.91
Gene sequence:
>666_bases ATGCATTTTTCCACTCAACCCAGCGCGGGGCTTTGCACCTTTCCCCGCTCGACGGGCCGGTGTGCCCCGATTCCAGTCCA CCTCGCGGATAGCCATGTCCGCAGGGGCTGGCTCCGCGATCTTTCCAGGAGCCACGCTATGGCAGACAACTACTACGAGG CCACCGGTGTCCTCGTTCTCGACCACGTTACGCCGGTCATTCGTGCACTGTTCAGCGAATTCCGGCTGGATGCCGACTAT CCCGGCAACGGCGAGGCGTACATCGCCCTCCGGTCCGACAGTACACCCAGCTGGGACGATCTGCGCGAGACGCTGACCGA CCTGGCAACGTCGCTGGCCCTCACCCCATCGCCGGACACCCTCACACCGTTCGGTGAGGTGTTGAAGGTGCTCAGCGACC ACTTCTGCGCCGGCGGCAACGCGGCATTGGCATCGATGATCCAGCGGGACGACTTCGGAGACGCCGCCGATCTCAATGAC CTGTTCCTGCTCGCCACATGCTTCGATGACGGGCATCACCTTCGTGAGATCCGGTTCGAGGGTAGCTGGCGGTGCGACAA GCTTCTTCTGTTCGAGTTCGGTGGCGCGGGCCACTACATGAGCCGCGAGTTCGCATTGGACAGCGCGTCCAGCGACGCGC CGCAGCTAGGTGTGATGTCTCAATAG
Upstream 100 bases:
>100_bases CAACCACCGGTCTTCGAGGTTGCGCGCAGCGCCCCGCTGCGTGGCCGGACCAGTTCGCTTCGCATCACTTCGCGAACGGC CTCCGGTTCCACGGGGGCGC
Downstream 100 bases:
>100_bases GTTGTTCATCCAGGCCCGACCTGGGAAGCTGTGGTTACCAGGCCCCAGCAACTCAGGACAGGACACCGGATGAACAGTCA TAAGCATGCGCGATTGACCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MHFSTQPSAGLCTFPRSTGRCAPIPVHLADSHVRRGWLRDLSRSHAMADNYYEATGVLVLDHVTPVIRALFSEFRLDADY PGNGEAYIALRSDSTPSWDDLRETLTDLATSLALTPSPDTLTPFGEVLKVLSDHFCAGGNAALASMIQRDDFGDAADLND LFLLATCFDDGHHLREIRFEGSWRCDKLLLFEFGGAGHYMSREFALDSASSDAPQLGVMSQ
Sequences:
>Translated_221_residues MHFSTQPSAGLCTFPRSTGRCAPIPVHLADSHVRRGWLRDLSRSHAMADNYYEATGVLVLDHVTPVIRALFSEFRLDADY PGNGEAYIALRSDSTPSWDDLRETLTDLATSLALTPSPDTLTPFGEVLKVLSDHFCAGGNAALASMIQRDDFGDAADLND LFLLATCFDDGHHLREIRFEGSWRCDKLLLFEFGGAGHYMSREFALDSASSDAPQLGVMSQ >Mature_221_residues MHFSTQPSAGLCTFPRSTGRCAPIPVHLADSHVRRGWLRDLSRSHAMADNYYEATGVLVLDHVTPVIRALFSEFRLDADY PGNGEAYIALRSDSTPSWDDLRETLTDLATSLALTPSPDTLTPFGEVLKVLSDHFCAGGNAALASMIQRDDFGDAADLND LFLLATCFDDGHHLREIRFEGSWRCDKLLLFEFGGAGHYMSREFALDSASSDAPQLGVMSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24272; Mature: 24272
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFSTQPSAGLCTFPRSTGRCAPIPVHLADSHVRRGWLRDLSRSHAMADNYYEATGVLVL CCCCCCCCCCEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHCCEEEE DHVTPVIRALFSEFRLDADYPGNGEAYIALRSDSTPSWDDLRETLTDLATSLALTPSPDT HHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCC LTPFGEVLKVLSDHFCAGGNAALASMIQRDDFGDAADLNDLFLLATCFDDGHHLREIRFE CCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEEEEC GSWRCDKLLLFEFGGAGHYMSREFALDSASSDAPQLGVMSQ CCCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MHFSTQPSAGLCTFPRSTGRCAPIPVHLADSHVRRGWLRDLSRSHAMADNYYEATGVLVL CCCCCCCCCCEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHCCEEEE DHVTPVIRALFSEFRLDADYPGNGEAYIALRSDSTPSWDDLRETLTDLATSLALTPSPDT HHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCC LTPFGEVLKVLSDHFCAGGNAALASMIQRDDFGDAADLNDLFLLATCFDDGHHLREIRFE CCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEEEEC GSWRCDKLLLFEFGGAGHYMSREFALDSASSDAPQLGVMSQ CCCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA