| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609244
Identifier: 120609244
GI number: 120609244
Start: 589837
End: 590508
Strand: Reverse
Name: 120609244
Synonym: Aave_0543
Alternate gene names: NA
Gene position: 590508-589837 (Counterclockwise)
Preceding gene: 120609245
Following gene: 120609243
Centisome position: 11.03
GC content: 68.01
Gene sequence:
>672_bases ATGCCCACCACCGATTTCCGATCTTCCCCGCTCTACCTCATGGACGAATGCCCCGATGTCATGGCCGACGCGTGCGTCGC CGATGACCAGGGCGGCCTCGTCTTCCTCTCGATCTGGGCCCGCGACACGGCGGTCCAGCAGTTCCTCGCCCGCTTGACGT TGGGCCGCGACGAACAGGGGCTGCAGCACTTCCACCTCATCACGCCCGAAGGTGGCAGCGTTCCGGTGTTCGTCGGCAAC GTCGATCGCCTGGAAAAGCGCATGACCCGCGCCTACCGGCGAACGCTCTTCGGCGCGCTGTCCAACGTGTGGCTGTTCGA CCGGCGCTGCGTCAAGCCTGACAAGGCCAACGCGAGCGCGTTGGCCTTAGTGCCCAAGGGCAACGGCTGCACGCTGGACC ATCTCTGGTCGCTGGTGCGCGACACCTGTCCGCTGCCGCTGCTCGGTCACTGGCGCGAGCCGGTGCTCGATCTGCTGCAG GGCCGCGACATGCTGACGCGCCTCCCCTTCTCCCTCGGGCCGCTCGAAGGCCACCGGCTCGCGATCGACGTGCCGGTACT CACGCAGGCCCTCGGCGGGCTCATCCGCAGCGGAGACCTCCGCATCGAACCGCGGCAGCCGCCGCGTTCCAACGCTCTCA CGCCCACGCAATCGCTTGAAGCGGTGGCCTGA
Upstream 100 bases:
>100_bases GCCGGCAGTTCGAGCCGGTCTGAACGCCATCACTTCACCCCAGGGGGCTGCACACGCCCCGATGGGCCGGTGCTGTCCCC GCCACTCCGAGGACATTGCC
Downstream 100 bases:
>100_bases GATTCCGCAACGGTCGTGCCGGCGGCGACACCGCCGACACGTCCGCATTCCCTCGTCCATCCCAAGGAGAATTCCATGGC GCTCATGTTCGCGCGGCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MPTTDFRSSPLYLMDECPDVMADACVADDQGGLVFLSIWARDTAVQQFLARLTLGRDEQGLQHFHLITPEGGSVPVFVGN VDRLEKRMTRAYRRTLFGALSNVWLFDRRCVKPDKANASALALVPKGNGCTLDHLWSLVRDTCPLPLLGHWREPVLDLLQ GRDMLTRLPFSLGPLEGHRLAIDVPVLTQALGGLIRSGDLRIEPRQPPRSNALTPTQSLEAVA
Sequences:
>Translated_223_residues MPTTDFRSSPLYLMDECPDVMADACVADDQGGLVFLSIWARDTAVQQFLARLTLGRDEQGLQHFHLITPEGGSVPVFVGN VDRLEKRMTRAYRRTLFGALSNVWLFDRRCVKPDKANASALALVPKGNGCTLDHLWSLVRDTCPLPLLGHWREPVLDLLQ GRDMLTRLPFSLGPLEGHRLAIDVPVLTQALGGLIRSGDLRIEPRQPPRSNALTPTQSLEAVA >Mature_222_residues PTTDFRSSPLYLMDECPDVMADACVADDQGGLVFLSIWARDTAVQQFLARLTLGRDEQGLQHFHLITPEGGSVPVFVGNV DRLEKRMTRAYRRTLFGALSNVWLFDRRCVKPDKANASALALVPKGNGCTLDHLWSLVRDTCPLPLLGHWREPVLDLLQG RDMLTRLPFSLGPLEGHRLAIDVPVLTQALGGLIRSGDLRIEPRQPPRSNALTPTQSLEAVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24688; Mature: 24557
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTTDFRSSPLYLMDECPDVMADACVADDQGGLVFLSIWARDTAVQQFLARLTLGRDEQG CCCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCC LQHFHLITPEGGSVPVFVGNVDRLEKRMTRAYRRTLFGALSNVWLFDRRCVKPDKANASA CCEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE LALVPKGNGCTLDHLWSLVRDTCPLPLLGHWREPVLDLLQGRDMLTRLPFSLGPLEGHRL EEEEECCCCCCHHHHHHHHHHCCCCCCHHCHHHHHHHHHCCCHHHHHCCCCCCCCCCCEE AIDVPVLTQALGGLIRSGDLRIEPRQPPRSNALTPTQSLEAVA EEEHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHCC >Mature Secondary Structure PTTDFRSSPLYLMDECPDVMADACVADDQGGLVFLSIWARDTAVQQFLARLTLGRDEQG CCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCC LQHFHLITPEGGSVPVFVGNVDRLEKRMTRAYRRTLFGALSNVWLFDRRCVKPDKANASA CCEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE LALVPKGNGCTLDHLWSLVRDTCPLPLLGHWREPVLDLLQGRDMLTRLPFSLGPLEGHRL EEEEECCCCCCHHHHHHHHHHCCCCCCHHCHHHHHHHHHCCCHHHHHCCCCCCCCCCCEE AIDVPVLTQALGGLIRSGDLRIEPRQPPRSNALTPTQSLEAVA EEEHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA