| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609240
Identifier: 120609240
GI number: 120609240
Start: 584909
End: 585544
Strand: Reverse
Name: 120609240
Synonym: Aave_0539
Alternate gene names: NA
Gene position: 585544-584909 (Counterclockwise)
Preceding gene: 120609241
Following gene: 120609239
Centisome position: 10.94
GC content: 61.79
Gene sequence:
>636_bases ATGACAACTCCACGTGCGCCACAGAAGGGCGAGTTCTACACACTGCGGCCGGACCTGCGGGGCGGCGGCCCGGGCCATGG CGTCGTGTTCGAGAACGAAAAAGCTCTGCGCCCTCCAGGCCGGGGAATGATTCGGCCGCCACACGGCGGCTTTCCGCCCC TGCGTGAAATTCCAAAGCTGCGCTACGACAGCAGGGAGGGCCTGATGCCGAGCGATATGGAGAGCGGATTCAGCGGCTAT TGGCTGGTCTCTGCGGCATTGAAGGAGGTGTTCGAGTCCGTGGATGCAGGCGGATTTGCGTTCCAGCCCTGCGAGTTCAC GCTGGAGGATGGATCGCAAGGTCCGGACTATTTCTTGTGCGATGTGGTGCGGACACTGGACGCGCTCGATGAGGCCGCAT CCACTCTCAAGATCCTTACCGAGGGCTATCCGGCCGGGAAGTACTACAGCCTCGCTGGCGGTGCCCGCCTCGCATTCATC AAAGAGGTCGTGGGATCCGCGCACATCTTCCGGACGCCATACAACAGTCAGTTGGTCATTTGCGATCGCATGCTACGCGA CGCCTTGATCGCGGGCGGTTTCGGCAAGCCCCCGAACTCTCGTGGCGTTTGGCTTGAAGACGCCGCGGACTATTGA
Upstream 100 bases:
>100_bases CAGCCACACCAAGTGGCATCCTATGCCCCTCGCCGGGAGTACCCAGCGGCTACCGCATGGCTTGACTTGCCTGCCGTTTT TTGAACCCACACACGCCGAC
Downstream 100 bases:
>100_bases TCCATAGGGAATTTCGGACCTCCGGAGTCGAGGCACATGGCGGACAACGATCCCATCCTGCAAAGTCACCATGTCATCGA GCAGAGTTTCTTTCGTAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MTTPRAPQKGEFYTLRPDLRGGGPGHGVVFENEKALRPPGRGMIRPPHGGFPPLREIPKLRYDSREGLMPSDMESGFSGY WLVSAALKEVFESVDAGGFAFQPCEFTLEDGSQGPDYFLCDVVRTLDALDEAASTLKILTEGYPAGKYYSLAGGARLAFI KEVVGSAHIFRTPYNSQLVICDRMLRDALIAGGFGKPPNSRGVWLEDAADY
Sequences:
>Translated_211_residues MTTPRAPQKGEFYTLRPDLRGGGPGHGVVFENEKALRPPGRGMIRPPHGGFPPLREIPKLRYDSREGLMPSDMESGFSGY WLVSAALKEVFESVDAGGFAFQPCEFTLEDGSQGPDYFLCDVVRTLDALDEAASTLKILTEGYPAGKYYSLAGGARLAFI KEVVGSAHIFRTPYNSQLVICDRMLRDALIAGGFGKPPNSRGVWLEDAADY >Mature_210_residues TTPRAPQKGEFYTLRPDLRGGGPGHGVVFENEKALRPPGRGMIRPPHGGFPPLREIPKLRYDSREGLMPSDMESGFSGYW LVSAALKEVFESVDAGGFAFQPCEFTLEDGSQGPDYFLCDVVRTLDALDEAASTLKILTEGYPAGKYYSLAGGARLAFIK EVVGSAHIFRTPYNSQLVICDRMLRDALIAGGFGKPPNSRGVWLEDAADY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23039; Mature: 22908
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPRAPQKGEFYTLRPDLRGGGPGHGVVFENEKALRPPGRGMIRPPHGGFPPLREIPKL CCCCCCCCCCCEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHC RYDSREGLMPSDMESGFSGYWLVSAALKEVFESVDAGGFAFQPCEFTLEDGSQGPDYFLC CCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHCCCCEEECCCEEEECCCCCCCCHHHH DVVRTLDALDEAASTLKILTEGYPAGKYYSLAGGARLAFIKEVVGSAHIFRTPYNSQLVI HHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHCCCEEEECCCCCEEHH CDRMLRDALIAGGFGKPPNSRGVWLEDAADY HHHHHHHHHHHCCCCCCCCCCCEEECCCCCC >Mature Secondary Structure TTPRAPQKGEFYTLRPDLRGGGPGHGVVFENEKALRPPGRGMIRPPHGGFPPLREIPKL CCCCCCCCCCEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHC RYDSREGLMPSDMESGFSGYWLVSAALKEVFESVDAGGFAFQPCEFTLEDGSQGPDYFLC CCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHCCCCEEECCCEEEECCCCCCCCHHHH DVVRTLDALDEAASTLKILTEGYPAGKYYSLAGGARLAFIKEVVGSAHIFRTPYNSQLVI HHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHCCCEEEECCCCCEEHH CDRMLRDALIAGGFGKPPNSRGVWLEDAADY HHHHHHHHHHHCCCCCCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA