| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609237
Identifier: 120609237
GI number: 120609237
Start: 579653
End: 580081
Strand: Reverse
Name: 120609237
Synonym: Aave_0536
Alternate gene names: NA
Gene position: 580081-579653 (Counterclockwise)
Preceding gene: 120609238
Following gene: 120609233
Centisome position: 10.84
GC content: 68.53
Gene sequence:
>429_bases ATGATGAAGAAGAGCATGCTGACCCACATCGCGCTGGCGGGTGCCCTGCTGGCTTGTGCCGGCGCGGCACAGGCATGCTG CCCCGACGGCGGCCACGGGGCTCCGGCGGCCTCCGCGGGGTTGGGCGAAAGCCTGCCGAAGGCCCGGAACCTCGCGTTGG ATCCAACGTGGCGGATCTATGAGTTCTCGCGCGACGGCGTGACCTACCTACAGATCAACGATGTGGCGGGCACGGTGCGT GCAGCCGTGGGCCGGGTCAACGACACGCTGTGGGTGTTGCCCATGGGTGCGGACGTCGCACGCGTGACCTTGCCGGCCAA GGGTGCGGGCACCAGCGGGTCCGTGGTGTACCAGACGTCGGGCTTCGTCGTGCGCGTGGTGCCAGGCGGCAGCGGCGGCA ATTCTTGGGAAATCAGCGCCGCAGACTGA
Upstream 100 bases:
>100_bases CTTCGCGCTTGTCAACCGCGCCGGGGCGCGGACCACGTACCTTGGATCGGCCTGAAACGCAGGCGATAGCTCCCCGAAGG GGACGAGGACGACCATGAAG
Downstream 100 bases:
>100_bases GCCCTTCGCCCACCGACTCTGAGACGAGAAAGCTGAGGCAGTACGCATGGCGGCGCCGACAGGTGCCGCCATGCACTTTG AGCCTGGCCGCGAGCTCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MMKKSMLTHIALAGALLACAGAAQACCPDGGHGAPAASAGLGESLPKARNLALDPTWRIYEFSRDGVTYLQINDVAGTVR AAVGRVNDTLWVLPMGADVARVTLPAKGAGTSGSVVYQTSGFVVRVVPGGSGGNSWEISAAD
Sequences:
>Translated_142_residues MMKKSMLTHIALAGALLACAGAAQACCPDGGHGAPAASAGLGESLPKARNLALDPTWRIYEFSRDGVTYLQINDVAGTVR AAVGRVNDTLWVLPMGADVARVTLPAKGAGTSGSVVYQTSGFVVRVVPGGSGGNSWEISAAD >Mature_142_residues MMKKSMLTHIALAGALLACAGAAQACCPDGGHGAPAASAGLGESLPKARNLALDPTWRIYEFSRDGVTYLQINDVAGTVR AAVGRVNDTLWVLPMGADVARVTLPAKGAGTSGSVVYQTSGFVVRVVPGGSGGNSWEISAAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14386; Mature: 14386
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKKSMLTHIALAGALLACAGAAQACCPDGGHGAPAASAGLGESLPKARNLALDPTWRIY CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEE EFSRDGVTYLQINDVAGTVRAAVGRVNDTLWVLPMGADVARVTLPAKGAGTSGSVVYQTS EECCCCEEEEEEECCCHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCCCCCEEEEEC GFVVRVVPGGSGGNSWEISAAD CEEEEEEECCCCCCEEEEEECC >Mature Secondary Structure MMKKSMLTHIALAGALLACAGAAQACCPDGGHGAPAASAGLGESLPKARNLALDPTWRIY CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEE EFSRDGVTYLQINDVAGTVRAAVGRVNDTLWVLPMGADVARVTLPAKGAGTSGSVVYQTS EECCCCEEEEEEECCCHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCCCCCEEEEEC GFVVRVVPGGSGGNSWEISAAD CEEEEEEECCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA