| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609231
Identifier: 120609231
GI number: 120609231
Start: 573957
End: 574715
Strand: Reverse
Name: 120609231
Synonym: Aave_0530
Alternate gene names: NA
Gene position: 574715-573957 (Counterclockwise)
Preceding gene: 120609232
Following gene: 120609230
Centisome position: 10.74
GC content: 71.15
Gene sequence:
>759_bases ATGCGAGCGGAAAGCCCTTCAGCCATCGCGGTATTCATTGCGGTAAGCCTGTGCGCCCTTGGCCTGGGTGCGCCCAACGT GGCGCAGGCGCAGGCGCAAGCAGCGCGCGTCGGCGAGACCCGCACCACGGCAAGCGCAGCACGGCCGTTGGCCGATGCGC ACGACGACGAGGCCCGGGCCCGCGAATGGGGCCTGCGCGCGGAGGACTGGTCGCGCTACCGGACGTTGATGCAGGGGCCT CTCGGCATCTACTCCCCCAACCTCGATCCGCTGACGGCACTCGGCATCGAGGCACGCAGTGACGAGGAGCGGCGACGATA CGCGGAGCTCCAGGTGCAGGCCGAGGCCCGCCGCGTGCAAAAAACCCTGGACTACCAGCGTGCATACGACGCGGCATGGC AGCGGCTGTACCCCGACCAGCAGCGCGTGGCACTGCAGGCCGGCCCGGCGGCCGGCAGCAGCGGTACCGCGGAACCGGGA CGCTTGGCCCTGTTCGTGAAGGAGGATTGCGCCGCGTGCGACCAGCGCGTGCAGCAGCTCCAGTCCGCCGGCACACCGGT GGACGTGTACCTGATCGGAAGCCGCGGCGACGACGAGCGCATCCGCCGGTGGGCGCGGCGAGCGGGCGTCGATCCCGCCA AGGTGCGGGCGCGGACGATCACGCTCAACCACGATGGCGGCCGCTGGCTGTCGCTCGGCGCGTCCGGCGATCTTCCGGCG GTCATGCGCGAGGTGGGTGGCCAATGGCAGCGACAGTGA
Upstream 100 bases:
>100_bases CGTGGGTGGCGGCTGGAAGTGATCGAGCCGCAAGCCGCCATGTTCTCGGTCGGAGACCAGGTGCGCCGGCTGCCGCTGCG TGCGCGCTGAGGCGGCCGAC
Downstream 100 bases:
>100_bases TTCCTCAGCGCTGCACCACGGTCCTTCGATGGGCGATCGCACTGGGCACGGCCGCATGCAGCGCCGTGCCCGCCCTCGCC CAGGAGCTTCCCCCGCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MRAESPSAIAVFIAVSLCALGLGAPNVAQAQAQAARVGETRTTASAARPLADAHDDEARAREWGLRAEDWSRYRTLMQGP LGIYSPNLDPLTALGIEARSDEERRRYAELQVQAEARRVQKTLDYQRAYDAAWQRLYPDQQRVALQAGPAAGSSGTAEPG RLALFVKEDCAACDQRVQQLQSAGTPVDVYLIGSRGDDERIRRWARRAGVDPAKVRARTITLNHDGGRWLSLGASGDLPA VMREVGGQWQRQ
Sequences:
>Translated_252_residues MRAESPSAIAVFIAVSLCALGLGAPNVAQAQAQAARVGETRTTASAARPLADAHDDEARAREWGLRAEDWSRYRTLMQGP LGIYSPNLDPLTALGIEARSDEERRRYAELQVQAEARRVQKTLDYQRAYDAAWQRLYPDQQRVALQAGPAAGSSGTAEPG RLALFVKEDCAACDQRVQQLQSAGTPVDVYLIGSRGDDERIRRWARRAGVDPAKVRARTITLNHDGGRWLSLGASGDLPA VMREVGGQWQRQ >Mature_252_residues MRAESPSAIAVFIAVSLCALGLGAPNVAQAQAQAARVGETRTTASAARPLADAHDDEARAREWGLRAEDWSRYRTLMQGP LGIYSPNLDPLTALGIEARSDEERRRYAELQVQAEARRVQKTLDYQRAYDAAWQRLYPDQQRVALQAGPAAGSSGTAEPG RLALFVKEDCAACDQRVQQLQSAGTPVDVYLIGSRGDDERIRRWARRAGVDPAKVRARTITLNHDGGRWLSLGASGDLPA VMREVGGQWQRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27577; Mature: 27577
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAESPSAIAVFIAVSLCALGLGAPNVAQAQAQAARVGETRTTASAARPLADAHDDEARA CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHH REWGLRAEDWSRYRTLMQGPLGIYSPNLDPLTALGIEARSDEERRRYAELQVQAEARRVQ HHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH KTLDYQRAYDAAWQRLYPDQQRVALQAGPAAGSSGTAEPGRLALFVKEDCAACDQRVQQL HHHHHHHHHHHHHHHHCCCHHHEEEECCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHH QSAGTPVDVYLIGSRGDDERIRRWARRAGVDPAKVRARTITLNHDGGRWLSLGASGDLPA HHCCCCEEEEEECCCCCHHHHHHHHHHCCCCHHHEEEEEEEEECCCCCEEEECCCCCHHH VMREVGGQWQRQ HHHHHCCCCCCC >Mature Secondary Structure MRAESPSAIAVFIAVSLCALGLGAPNVAQAQAQAARVGETRTTASAARPLADAHDDEARA CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHH REWGLRAEDWSRYRTLMQGPLGIYSPNLDPLTALGIEARSDEERRRYAELQVQAEARRVQ HHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH KTLDYQRAYDAAWQRLYPDQQRVALQAGPAAGSSGTAEPGRLALFVKEDCAACDQRVQQL HHHHHHHHHHHHHHHHCCCHHHEEEECCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHH QSAGTPVDVYLIGSRGDDERIRRWARRAGVDPAKVRARTITLNHDGGRWLSLGASGDLPA HHCCCCEEEEEECCCCCHHHHHHHHHHCCCCHHHEEEEEEEEECCCCCEEEECCCCCHHH VMREVGGQWQRQ HHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA