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The map label for this gene is ykfG [C]

Identifier: 120609194

GI number: 120609194

Start: 530671

End: 531174

Strand: Reverse

Name: ykfG [C]

Synonym: Aave_0492

Alternate gene names: 120609194

Gene position: 531174-530671 (Counterclockwise)

Preceding gene: 120609195

Following gene: 120609193

Centisome position: 9.92

GC content: 63.69

Gene sequence:

>504_bases
ATGCCGCAACTTGCCACGTCCGAGGTGCTGCAACCCAGCACTACACCCTGCCCGGCACTCACCGTCCAGGAAAGCCGACT
GGTCCATCGCGCACTCCACGTGCTGGAGCAGCGCATGTTCCATCGCGAGGCAGCGATCTCGACCCCGAGGGAGCTTTACG
ACTACCTGCGGCTCAAGCTCGCCGGCGAACTCCACGAGGTCTTCGGCGTTGTCTTCCTCGACTGCCAAAATCGAGCCATC
GCATTCGAGGCCCTGTTCCGAGGGACGATCAATCAGGCGGTGGTCTACCCGCGCGTCATCGTCAAGCGAGCGATGGATCT
GAACGCCAGTTCGGTCATCCTCGTCCATAACCACCCTTCGGGCACCTCCCAGTGCAGCGATGCGGATCGGGGCCTCACGG
AGCGCATCTGCGCCTCGCTAGGCTTGATCGATGTCCGCGTGGTGGACCACGTGATCGTCGGCTCGGGCACGCCCTACTCC
TTCGCCGAAGCCGGCCTGCTCTGA

Upstream 100 bases:

>100_bases
CAGCGCGAAAGCGCTGGTGGATGCACTTCATCGCCAACCCACGGGGTCTCCACCCCGATGGGCGTGTAGCCCCTCTTTGT
AAGAAAGTCGGAGGCTACAA

Downstream 100 bases:

>100_bases
TCCAAAGACGCCCCGGCCACGGGGCGTCCTCTTTTCGCCGAACAACACGGCAGCGGACGTTACCCATTTCCCCTGGCCGC
GCCCGGGCACCTGCGTTCGA

Product: DNA repair protein RadC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MPQLATSEVLQPSTTPCPALTVQESRLVHRALHVLEQRMFHREAAISTPRELYDYLRLKLAGELHEVFGVVFLDCQNRAI
AFEALFRGTINQAVVYPRVIVKRAMDLNASSVILVHNHPSGTSQCSDADRGLTERICASLGLIDVRVVDHVIVGSGTPYS
FAEAGLL

Sequences:

>Translated_167_residues
MPQLATSEVLQPSTTPCPALTVQESRLVHRALHVLEQRMFHREAAISTPRELYDYLRLKLAGELHEVFGVVFLDCQNRAI
AFEALFRGTINQAVVYPRVIVKRAMDLNASSVILVHNHPSGTSQCSDADRGLTERICASLGLIDVRVVDHVIVGSGTPYS
FAEAGLL
>Mature_166_residues
PQLATSEVLQPSTTPCPALTVQESRLVHRALHVLEQRMFHREAAISTPRELYDYLRLKLAGELHEVFGVVFLDCQNRAIA
FEALFRGTINQAVVYPRVIVKRAMDLNASSVILVHNHPSGTSQCSDADRGLTERICASLGLIDVRVVDHVIVGSGTPYSF
AEAGLL

Specific function: Unknown

COG id: COG2003

COG function: function code L; DNA repair proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0758 family [H]

Homologues:

Organism=Escherichia coli, GI2367100, Length=148, Percent_Identity=47.972972972973, Blast_Score=140, Evalue=5e-35,
Organism=Escherichia coli, GI1788997, Length=153, Percent_Identity=46.4052287581699, Blast_Score=135, Evalue=1e-33,
Organism=Escherichia coli, GI1788312, Length=148, Percent_Identity=46.6216216216216, Blast_Score=134, Evalue=3e-33,
Organism=Escherichia coli, GI87082300, Length=125, Percent_Identity=44.8, Blast_Score=122, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010994
- InterPro:   IPR001405
- InterPro:   IPR020891 [H]

Pfam domain/function: PF04002 DUF2466 [H]

EC number: NA

Molecular weight: Translated: 18392; Mature: 18261

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: PS01302 RADC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQLATSEVLQPSTTPCPALTVQESRLVHRALHVLEQRMFHREAAISTPRELYDYLRLKL
CCCCCCHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
AGELHEVFGVVFLDCQNRAIAFEALFRGTINQAVVYPRVIVKRAMDLNASSVILVHNHPS
HHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
GTSQCSDADRGLTERICASLGLIDVRVVDHVIVGSGTPYSFAEAGLL
CCCCCCCHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHCCCC
>Mature Secondary Structure 
PQLATSEVLQPSTTPCPALTVQESRLVHRALHVLEQRMFHREAAISTPRELYDYLRLKL
CCCCCHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
AGELHEVFGVVFLDCQNRAIAFEALFRGTINQAVVYPRVIVKRAMDLNASSVILVHNHPS
HHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
GTSQCSDADRGLTERICASLGLIDVRVVDHVIVGSGTPYSFAEAGLL
CCCCCCCHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA