| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609181
Identifier: 120609181
GI number: 120609181
Start: 514182
End: 514670
Strand: Reverse
Name: 120609181
Synonym: Aave_0478
Alternate gene names: NA
Gene position: 514670-514182 (Counterclockwise)
Preceding gene: 120609182
Following gene: 120609180
Centisome position: 9.62
GC content: 70.96
Gene sequence:
>489_bases ATGCTGAAACTGACAGACCGCGCCGATCTCGGCGTGTTCTACGACGCCGACGCCGCACGCTACGGCGACCAGGGCTACAC GGAGACCGTGACGCGCGAGCGCTTCGCGGCGTTCTACGCGGACTGCCCGTCGATCGGCTTCGAGGCCGACGGCCAGCCCA TCGGCGGCATCCTGTTCGACGGCGAGGAGGCGCACATCGCCGTGCTGCCCTCGCACCACGGGCGCTGGGCGCTGCTGCTC AAGCCGGCCCTGGCGTGGCTTTTCGCGCTGCAGCCGGGCATCACGGTGGCGGTGGAGCGGAACAACAGCCGCTGCCTGCG CTTTCTCGACCGGCACGGCTGGCAGCGCGCCGGCGAGCGCGACGGCGACCTGCTCTACCGGCTCGAACCCCAGGGCGGTA CGCGCAAGACCGCCTACCCCTTCCGCCGCCGCGCGCGCGGCACCGTTTCTCCATCCACCGAGGTGGCACCATGCACACAT CCCAGCTGA
Upstream 100 bases:
>100_bases GCACGTGCGCAAGGCAATGCGCCAGCTGCTGCAGATGGAACCCGAGGACGAGCCCGCTGCCCTGGCAGCCTGACCGGCGG GCCGCACCAGGGAGCACCCC
Downstream 100 bases:
>100_bases CCCCGTCCCTCCAGCCATCCACCATCCCTGCGGCCTGGCGCTCCGGCGCGAACCGGCTCGTGTCCTGCGGGGGCCGGCCG GGTGTCCAGCTGCGCCTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MLKLTDRADLGVFYDADAARYGDQGYTETVTRERFAAFYADCPSIGFEADGQPIGGILFDGEEAHIAVLPSHHGRWALLL KPALAWLFALQPGITVAVERNNSRCLRFLDRHGWQRAGERDGDLLYRLEPQGGTRKTAYPFRRRARGTVSPSTEVAPCTH PS
Sequences:
>Translated_162_residues MLKLTDRADLGVFYDADAARYGDQGYTETVTRERFAAFYADCPSIGFEADGQPIGGILFDGEEAHIAVLPSHHGRWALLL KPALAWLFALQPGITVAVERNNSRCLRFLDRHGWQRAGERDGDLLYRLEPQGGTRKTAYPFRRRARGTVSPSTEVAPCTH PS >Mature_162_residues MLKLTDRADLGVFYDADAARYGDQGYTETVTRERFAAFYADCPSIGFEADGQPIGGILFDGEEAHIAVLPSHHGRWALLL KPALAWLFALQPGITVAVERNNSRCLRFLDRHGWQRAGERDGDLLYRLEPQGGTRKTAYPFRRRARGTVSPSTEVAPCTH PS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18034; Mature: 18034
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKLTDRADLGVFYDADAARYGDQGYTETVTRERFAAFYADCPSIGFEADGQPIGGILFD CCEECCCCCCCEEECCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEC GEEAHIAVLPSHHGRWALLLKPALAWLFALQPGITVAVERNNSRCLRFLDRHGWQRAGER CCCCEEEEEECCCCCEEEEHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCHHCCCCC DGDLLYRLEPQGGTRKTAYPFRRRARGTVSPSTEVAPCTHPS CCCEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLKLTDRADLGVFYDADAARYGDQGYTETVTRERFAAFYADCPSIGFEADGQPIGGILFD CCEECCCCCCCEEECCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEC GEEAHIAVLPSHHGRWALLLKPALAWLFALQPGITVAVERNNSRCLRFLDRHGWQRAGER CCCCEEEEEECCCCCEEEEHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCHHCCCCC DGDLLYRLEPQGGTRKTAYPFRRRARGTVSPSTEVAPCTHPS CCCEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA