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The map label for this gene is 120609088

Identifier: 120609088

GI number: 120609088

Start: 411611

End: 412510

Strand: Reverse

Name: 120609088

Synonym: Aave_0385

Alternate gene names: NA

Gene position: 412510-411611 (Counterclockwise)

Preceding gene: 120609089

Following gene: 120609084

Centisome position: 7.71

GC content: 72.78

Gene sequence:

>900_bases
ATGAGCGACACCCCCCACGAAGAAGCGCATACCGGCCCGATCAAGACCCCCCGCCAGCTGCTCTGGACGGTATTCGTCTG
CTTCGTGGTGCCGGTCTTCGCCATCATCGGCCTCGTGATCTACGTCACCTCGGGCAACAAGCCGGCCCAGGGCTCGGGCA
ACCCGGAGCGTGCCCTGGCCGAGCGCATCCAGAAGGTGGGCATGGTGGAGGTACGCGACGCCAACCGGCCGCTGCGCAGC
GGCGAGGAAGTCTTCAAGGGCCAGTGCGCCGCATGCCACGCCACCGGGGCCGCCGGAGCTCCCAAGTTCGGCGACGCCGC
CGCCTGGGGCCCGCGCATCCAGACAGGATTCGAGGCGCTGGTGCACTCCGCTCTGGCCGGCAAGGGCGCCATGGCACCCC
AGGGTGGAGGCGACTTCAACGACACCGAGATCGCCCGGGGCGTGGCCTACATGGCGAACGCAGCCGGCGCCAAGTTCACC
GAGCCGGCAGCCCCCGCCGCCGGTGGTGCGTCCGCGCCCGCCGAGGTCCAGGCCGGGGCCACGGGCGCATCCGGCACCCC
GGCCCCGGCTGCCCCCGCGGCACCTGCCATGGCCGCAGCGCAGCAGGCTCCGGCGGCCCCCACGGCCGCAGCAGCCACGG
CACCTGCCGCCGCGGTCGCGGCCGGTGCGGGCGAAGCGCTCTACAAGCAGGCCTGCCAGGTGTGCCATGCGGCCGGCGTG
GCCGGTGCACCCAAGTTCGGCGACAAGGCCGCCTGGGCCGAGCGCCTGAAGGACGGGATCGACGGCATGACGCGCATCGC
CATCGCCGGCAAGGGCGCCATGCCTCCGCGCGGCGGCACCCAGGCATCGGATGCGGAAATCCGTGCCACCGTGGAATACA
TGGCCAACGCCGCCAAGTAG

Upstream 100 bases:

>100_bases
AGGGTGTTGCGGCTGGCCGTTTTCCCTAACGGCCGGCCCGGGAGGCGCTTCCTATAATCGTCCGCTGGTTCCGCCAGACA
TACCCACAGAGGTCCCCCTC

Downstream 100 bases:

>100_bases
CTGGCGCCAGGGTTTCCGTCTGCCCTGAAAGCCGGTCCGCACGACCGGCTTTTTTTATTGGGCCTCTGCCGCGGCCGGGA
TCAGTCCCGCAGTTCCGAAG

Product: class I cytochrome c

Products: NA

Alternate protein names: Cytochrome c555 [H]

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MSDTPHEEAHTGPIKTPRQLLWTVFVCFVVPVFAIIGLVIYVTSGNKPAQGSGNPERALAERIQKVGMVEVRDANRPLRS
GEEVFKGQCAACHATGAAGAPKFGDAAAWGPRIQTGFEALVHSALAGKGAMAPQGGGDFNDTEIARGVAYMANAAGAKFT
EPAAPAAGGASAPAEVQAGATGASGTPAPAAPAAPAMAAAQQAPAAPTAAAATAPAAAVAAGAGEALYKQACQVCHAAGV
AGAPKFGDKAAWAERLKDGIDGMTRIAIAGKGAMPPRGGTQASDAEIRATVEYMANAAK

Sequences:

>Translated_299_residues
MSDTPHEEAHTGPIKTPRQLLWTVFVCFVVPVFAIIGLVIYVTSGNKPAQGSGNPERALAERIQKVGMVEVRDANRPLRS
GEEVFKGQCAACHATGAAGAPKFGDAAAWGPRIQTGFEALVHSALAGKGAMAPQGGGDFNDTEIARGVAYMANAAGAKFT
EPAAPAAGGASAPAEVQAGATGASGTPAPAAPAAPAMAAAQQAPAAPTAAAATAPAAAVAAGAGEALYKQACQVCHAAGV
AGAPKFGDKAAWAERLKDGIDGMTRIAIAGKGAMPPRGGTQASDAEIRATVEYMANAAK
>Mature_298_residues
SDTPHEEAHTGPIKTPRQLLWTVFVCFVVPVFAIIGLVIYVTSGNKPAQGSGNPERALAERIQKVGMVEVRDANRPLRSG
EEVFKGQCAACHATGAAGAPKFGDAAAWGPRIQTGFEALVHSALAGKGAMAPQGGGDFNDTEIARGVAYMANAAGAKFTE
PAAPAAGGASAPAEVQAGATGASGTPAPAAPAAPAMAAAQQAPAAPTAAAATAPAAAVAAGAGEALYKQACQVCHAAGVA
GAPKFGDKAAWAERLKDGIDGMTRIAIAGKGAMPPRGGTQASDAEIRATVEYMANAAK

Specific function: This basic c-type monoheme cytochrome has been found exclusively in the green photosynthetic bacteria, although its role in bacterial photosynthesis is not established. It has an unusually low redox potential compared with mitochondrial cytochrome c. It i

COG id: COG3245

COG function: function code C; Cytochrome c5

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR002323 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 29663; Mature: 29532

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTPHEEAHTGPIKTPRQLLWTVFVCFVVPVFAIIGLVIYVTSGNKPAQGSGNPERALA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHH
ERIQKVGMVEVRDANRPLRSGEEVFKGQCAACHATGAAGAPKFGDAAAWGPRIQTGFEAL
HHHHHCCCEEEECCCCCCCCHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH
VHSALAGKGAMAPQGGGDFNDTEIARGVAYMANAAGAKFTEPAAPAAGGASAPAEVQAGA
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCC
TGASGTPAPAAPAAPAMAAAQQAPAAPTAAAATAPAAAVAAGAGEALYKQACQVCHAAGV
CCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHCC
AGAPKFGDKAAWAERLKDGIDGMTRIAIAGKGAMPPRGGTQASDAEIRATVEYMANAAK
CCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDTPHEEAHTGPIKTPRQLLWTVFVCFVVPVFAIIGLVIYVTSGNKPAQGSGNPERALA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHH
ERIQKVGMVEVRDANRPLRSGEEVFKGQCAACHATGAAGAPKFGDAAAWGPRIQTGFEAL
HHHHHCCCEEEECCCCCCCCHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH
VHSALAGKGAMAPQGGGDFNDTEIARGVAYMANAAGAKFTEPAAPAAGGASAPAEVQAGA
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCC
TGASGTPAPAAPAAPAMAAAQQAPAAPTAAAATAPAAAVAAGAGEALYKQACQVCHAAGV
CCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHCC
AGAPKFGDKAAWAERLKDGIDGMTRIAIAGKGAMPPRGGTQASDAEIRATVEYMANAAK
CCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12093901 [H]