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The map label for this gene is lemA [H]

Identifier: 120609084

GI number: 120609084

Start: 408591

End: 409325

Strand: Reverse

Name: lemA [H]

Synonym: Aave_0381

Alternate gene names: 120609084

Gene position: 409325-408591 (Counterclockwise)

Preceding gene: 120609088

Following gene: 120609083

Centisome position: 7.65

GC content: 69.12

Gene sequence:

>735_bases
ATGCGCCGCCCGCTGACGGGTCAGGCCCGGCGCCTGCGGCAGAATGACACGTCGCCGGAGCGGCCAGGGCACGTCGCCCC
AACGTTCGCAATCCCCGCCCGGCGCCTGCACACCATGAAACGCCTCATCGCCACCCTCGCCGCCGCGCTGGCCCTCTCGG
GCTGCGGCTACAACGACTTCCAGCGCCTGGACGAGCAGAGCAAGGCCGCCTGGAGCGAAGTGCTCAACCAGTACCAGCGC
CGCGCCGACCTCGTGCCCAACATCGTCGCCACCGTCAAGGGCGAGGCCGCGTTCGAGCAGGACACGCTCACCAAGGTGGT
GGAGGCACGCGCCAAGGCGACCTCGATCCAGGTGACGCCCGAGACGCTGAACAACCCCGAGGCGTTCAACAAGTTCCAGC
AGGCGCAGGGCGAGCTCTCGTCCGCGCTCTCGCGCCTGATGGTGGTGGCCGAGCGCTATCCCCAGCTGCAGGCCAACCAG
GCGTTCCGCGACCTGCGCGTGACGCTCGAAGGCACCGAGAACCGCATCACCGTGGCGCGCAACCGCTACATCCAGACCGT
GCAGGAATACAACGTGCTCGCGCGCAGTTTTCCGACCAACCTGACGGCCAAGGTATTCAGCTACGAGCCCAAGCCGAGCT
TCACGGTGCAGAACGAGGCGCAGATCAGCACGCCGCCGGCGGTGGACTTCTCCCGTCCCGCACCGGCCGCTCCCGGCGCG
CCCGCGTCCCGCTGA

Upstream 100 bases:

>100_bases
CCTGGCATCGGGGCCCCGGCGGGGCCGGATCGGGAAGTGCGCCATTGTCGGAAATTCGGCCGCACCGCGCATCCTGCCCG
TCGAGCGGCCGCTCTGCCAC

Downstream 100 bases:

>100_bases
AGCCCCTCGCGCATGCCCGCCATCACCGCGCCGCTCCGCACCCTGCTGGCCCTGCTGTGCATCGTGCTCGGGCTGGCGTT
CGCGCTGCCGGCGCGGGCAC

Product: LemA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MRRPLTGQARRLRQNDTSPERPGHVAPTFAIPARRLHTMKRLIATLAAALALSGCGYNDFQRLDEQSKAAWSEVLNQYQR
RADLVPNIVATVKGEAAFEQDTLTKVVEARAKATSIQVTPETLNNPEAFNKFQQAQGELSSALSRLMVVAERYPQLQANQ
AFRDLRVTLEGTENRITVARNRYIQTVQEYNVLARSFPTNLTAKVFSYEPKPSFTVQNEAQISTPPAVDFSRPAPAAPGA
PASR

Sequences:

>Translated_244_residues
MRRPLTGQARRLRQNDTSPERPGHVAPTFAIPARRLHTMKRLIATLAAALALSGCGYNDFQRLDEQSKAAWSEVLNQYQR
RADLVPNIVATVKGEAAFEQDTLTKVVEARAKATSIQVTPETLNNPEAFNKFQQAQGELSSALSRLMVVAERYPQLQANQ
AFRDLRVTLEGTENRITVARNRYIQTVQEYNVLARSFPTNLTAKVFSYEPKPSFTVQNEAQISTPPAVDFSRPAPAAPGA
PASR
>Mature_244_residues
MRRPLTGQARRLRQNDTSPERPGHVAPTFAIPARRLHTMKRLIATLAAALALSGCGYNDFQRLDEQSKAAWSEVLNQYQR
RADLVPNIVATVKGEAAFEQDTLTKVVEARAKATSIQVTPETLNNPEAFNKFQQAQGELSSALSRLMVVAERYPQLQANQ
AFRDLRVTLEGTENRITVARNRYIQTVQEYNVLARSFPTNLTAKVFSYEPKPSFTVQNEAQISTPPAVDFSRPAPAAPGA
PASR

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 27078; Mature: 27078

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRPLTGQARRLRQNDTSPERPGHVAPTFAIPARRLHTMKRLIATLAAALALSGCGYNDF
CCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
QRLDEQSKAAWSEVLNQYQRRADLVPNIVATVKGEAAFEQDTLTKVVEARAKATSIQVTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCEEEECH
ETLNNPEAFNKFQQAQGELSSALSRLMVVAERYPQLQANQAFRDLRVTLEGTENRITVAR
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEECCCCEEEHHH
NRYIQTVQEYNVLARSFPTNLTAKVFSYEPKPSFTVQNEAQISTPPAVDFSRPAPAAPGA
HHHHHHHHHHHHHHHHCCCCCEEHEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC
PASR
CCCC
>Mature Secondary Structure
MRRPLTGQARRLRQNDTSPERPGHVAPTFAIPARRLHTMKRLIATLAAALALSGCGYNDF
CCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
QRLDEQSKAAWSEVLNQYQRRADLVPNIVATVKGEAAFEQDTLTKVVEARAKATSIQVTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCEEEECH
ETLNNPEAFNKFQQAQGELSSALSRLMVVAERYPQLQANQAFRDLRVTLEGTENRITVAR
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEECCCCEEEHHH
NRYIQTVQEYNVLARSFPTNLTAKVFSYEPKPSFTVQNEAQISTPPAVDFSRPAPAAPGA
HHHHHHHHHHHHHHHHCCCCCEEHEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC
PASR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]