| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is creD [H]
Identifier: 120609019
GI number: 120609019
Start: 348031
End: 349440
Strand: Reverse
Name: creD [H]
Synonym: Aave_0316
Alternate gene names: 120609019
Gene position: 349440-348031 (Counterclockwise)
Preceding gene: 120609020
Following gene: 120609018
Centisome position: 6.53
GC content: 70.28
Gene sequence:
>1410_bases TTGAAACACCCCTTTCTCGCCAAAGCCGCGGCGCTCGTCGCGGTCACCCTGCTGCTGCTGTTCGGGCTCGGCATGATCGA CAACATCGTGCGCGACCGGCAGCACTACCGCAGTGAAGCCACCCGCAGCGTGGCCCAGAGCCTGGCGGGGCCGCAGACGC TGCTGGGACCGGTGCTGCACAGCGCCTGCGTGGAAACCTGGGATGCCGTGACCGGCAAGGGGGAGGAGCGCCGCACGACC GAGCAGCGGCGCGAATTCCTGCTCACGGCCATGCCCGAATCGCTGCAGGTGCGGTCTGGCGCCGCGATGCAGCAGCTTTC GCGCGGCCTGCACCAGGTCAACGCCTATACCCTCCAGGCCCACGTCACCGCGCGCTGGGCCACGCTCGCGGACCTGCGGC CGCACGCCACGGTGGAGGGATCGCGCATGCAGTGCGGCGCGCCCATCCTCATGCTGGCCGTGGGCGATGCACGCGGCATC CGCGCCGCACGGGTGGAGGTCGATGGACAGCCGCTGGCGCTCAAGCCCGGCACCTTCCACCCTACCTACACGCGCGGCCT GCACACGCCGCTGCCGGAATCGCTGCGCGGGCGCGGCGAGCCCCTGAGCGTTTCCGTGGATCTCGAACTGGTGGGCACCG AGCGGCTCTCGATCGTTCCCCTGGGGGGCAACACCGACGTGCAGTTGCAGAGCAGCTGGCCGCACCCGTCGTTCGGGGGC CGCTTCCTGCCGTCGGAGCGCACGATCGGCGACGATGGGTTCACGGCGCGCTGGCACCTCTCCGCGCTGGCCACCACAGC GCAGCAGGACGTGGCCGCCAGCCGGCGGCTCTGCGAAATCGGGGGCGATACGGCGCCCTACGAGCCGCCCGCCGCGGCCG AGGCGGGCTGCGCCGACGCATTCGGCGTGTCCTTCATCGATCCCGTCAATCCGTACTCGCTCTCGGACCGCGCCACGAAA TACGGCGTGCTGTTCATCGCGCTCACCTTCGTGGCCGTGGGCCTGTTCGAGTTGCTGCAGCAGCTGCGCGTGCACCCGGT GCAGTACCTGCTGGCGGGCAGCGCCCTGTGCAGCTTTTTCCTGCTGCTGGTGAGCCTGTCCGAGCACCTGCCTTTCGGCA CGGCCTACGCTGCGGCGGCCGGCGCGTGCGTGCTGCTGCTGACCTACTACGCCTGCCACATGCTGCGCAGCGTGCGGCGC GGCCTGCCGTTCGGCGCGGGCATCGCCCTGCTCTACGGCCTGCTCTATCTGCTGCTGCAACTGGAGCAGACGGCGCTGGT GGTGGGGGCGCTTTTGCTCTTCGCCGTGCTGGCGTTCGTGATGGTGGCCACCCGCAAGCTGGACTGGTATGCGCTGTCTT CCGGTGGCCGGGCGCTGCCTTCCACTGCGCGGACGGAGGCCGGACAATGA
Upstream 100 bases:
>100_bases GCGGCGCACGCCACTTCACGCTCGCCTCACACGCCTCATTTCCCCCTCACACCCGGAGCCGAGACTGCTCCTCCACCACC ACTCTCCGGAGGAGCACTCC
Downstream 100 bases:
>100_bases GCGGGGACACCGCCGCCATCGCGGATGCCGCCCGGCGCAGCGCCGCGGCCTGGTCGGGATACCTGTCGTCGTGGCAGGAG CCCGGGGCGGCCACGGCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 469; Mature: 469
Protein sequence:
>469_residues MKHPFLAKAAALVAVTLLLLFGLGMIDNIVRDRQHYRSEATRSVAQSLAGPQTLLGPVLHSACVETWDAVTGKGEERRTT EQRREFLLTAMPESLQVRSGAAMQQLSRGLHQVNAYTLQAHVTARWATLADLRPHATVEGSRMQCGAPILMLAVGDARGI RAARVEVDGQPLALKPGTFHPTYTRGLHTPLPESLRGRGEPLSVSVDLELVGTERLSIVPLGGNTDVQLQSSWPHPSFGG RFLPSERTIGDDGFTARWHLSALATTAQQDVAASRRLCEIGGDTAPYEPPAAAEAGCADAFGVSFIDPVNPYSLSDRATK YGVLFIALTFVAVGLFELLQQLRVHPVQYLLAGSALCSFFLLLVSLSEHLPFGTAYAAAAGACVLLLTYYACHMLRSVRR GLPFGAGIALLYGLLYLLLQLEQTALVVGALLLFAVLAFVMVATRKLDWYALSSGGRALPSTARTEAGQ
Sequences:
>Translated_469_residues MKHPFLAKAAALVAVTLLLLFGLGMIDNIVRDRQHYRSEATRSVAQSLAGPQTLLGPVLHSACVETWDAVTGKGEERRTT EQRREFLLTAMPESLQVRSGAAMQQLSRGLHQVNAYTLQAHVTARWATLADLRPHATVEGSRMQCGAPILMLAVGDARGI RAARVEVDGQPLALKPGTFHPTYTRGLHTPLPESLRGRGEPLSVSVDLELVGTERLSIVPLGGNTDVQLQSSWPHPSFGG RFLPSERTIGDDGFTARWHLSALATTAQQDVAASRRLCEIGGDTAPYEPPAAAEAGCADAFGVSFIDPVNPYSLSDRATK YGVLFIALTFVAVGLFELLQQLRVHPVQYLLAGSALCSFFLLLVSLSEHLPFGTAYAAAAGACVLLLTYYACHMLRSVRR GLPFGAGIALLYGLLYLLLQLEQTALVVGALLLFAVLAFVMVATRKLDWYALSSGGRALPSTARTEAGQ >Mature_469_residues MKHPFLAKAAALVAVTLLLLFGLGMIDNIVRDRQHYRSEATRSVAQSLAGPQTLLGPVLHSACVETWDAVTGKGEERRTT EQRREFLLTAMPESLQVRSGAAMQQLSRGLHQVNAYTLQAHVTARWATLADLRPHATVEGSRMQCGAPILMLAVGDARGI RAARVEVDGQPLALKPGTFHPTYTRGLHTPLPESLRGRGEPLSVSVDLELVGTERLSIVPLGGNTDVQLQSSWPHPSFGG RFLPSERTIGDDGFTARWHLSALATTAQQDVAASRRLCEIGGDTAPYEPPAAAEAGCADAFGVSFIDPVNPYSLSDRATK YGVLFIALTFVAVGLFELLQQLRVHPVQYLLAGSALCSFFLLLVSLSEHLPFGTAYAAAAGACVLLLTYYACHMLRSVRR GLPFGAGIALLYGLLYLLLQLEQTALVVGALLLFAVLAFVMVATRKLDWYALSSGGRALPSTARTEAGQ
Specific function: Unknown
COG id: COG4452
COG function: function code V; Inner membrane protein involved in colicin E2 resistance
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790862, Length=458, Percent_Identity=34.9344978165939, Blast_Score=246, Evalue=3e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010364 [H]
Pfam domain/function: PF06123 CreD [H]
EC number: NA
Molecular weight: Translated: 50409; Mature: 50409
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHPFLAKAAALVAVTLLLLFGLGMIDNIVRDRQHYRSEATRSVAQSLAGPQTLLGPVLH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH SACVETWDAVTGKGEERRTTEQRREFLLTAMPESLQVRSGAAMQQLSRGLHQVNAYTLQA HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHEEEEE HVTARWATLADLRPHATVEGSRMQCGAPILMLAVGDARGIRAARVEVDGQPLALKPGTFH EHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCEEECCCCCC PTYTRGLHTPLPESLRGRGEPLSVSVDLELVGTERLSIVPLGGNTDVQLQSSWPHPSFGG CCHHCCCCCCCCHHHCCCCCCEEEEEEEEEECCCCEEEEEECCCCCEEEECCCCCCCCCC RFLPSERTIGDDGFTARWHLSALATTAQQDVAASRRLCEIGGDTAPYEPPAAAEAGCADA CCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH FGVSFIDPVNPYSLSDRATKYGVLFIALTFVAVGLFELLQQLRVHPVQYLLAGSALCSFF CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLVSLSEHLPFGTAYAAAAGACVLLLTYYACHMLRSVRRGLPFGAGIALLYGLLYLLLQ HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH LEQTALVVGALLLFAVLAFVMVATRKLDWYALSSGGRALPSTARTEAGQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MKHPFLAKAAALVAVTLLLLFGLGMIDNIVRDRQHYRSEATRSVAQSLAGPQTLLGPVLH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH SACVETWDAVTGKGEERRTTEQRREFLLTAMPESLQVRSGAAMQQLSRGLHQVNAYTLQA HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHEEEEE HVTARWATLADLRPHATVEGSRMQCGAPILMLAVGDARGIRAARVEVDGQPLALKPGTFH EHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCEEECCCCCC PTYTRGLHTPLPESLRGRGEPLSVSVDLELVGTERLSIVPLGGNTDVQLQSSWPHPSFGG CCHHCCCCCCCCHHHCCCCCCEEEEEEEEEECCCCEEEEEECCCCCEEEECCCCCCCCCC RFLPSERTIGDDGFTARWHLSALATTAQQDVAASRRLCEIGGDTAPYEPPAAAEAGCADA CCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH FGVSFIDPVNPYSLSDRATKYGVLFIALTFVAVGLFELLQQLRVHPVQYLLAGSALCSFF CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLVSLSEHLPFGTAYAAAAGACVLLLTYYACHMLRSVRRGLPFGAGIALLYGLLYLLLQ HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH LEQTALVVGALLLFAVLAFVMVATRKLDWYALSSGGRALPSTARTEAGQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2835585; 3531171; 7610040; 9278503; 2984198 [H]