| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120608942
Identifier: 120608942
GI number: 120608942
Start: 267918
End: 268718
Strand: Reverse
Name: 120608942
Synonym: Aave_0239
Alternate gene names: NA
Gene position: 268718-267918 (Counterclockwise)
Preceding gene: 120608943
Following gene: 120608941
Centisome position: 5.02
GC content: 47.44
Gene sequence:
>801_bases ATGGCACTCAAGGAAGAAGACCTTCCCGACTACGACAAGGACGCCCTCTCGCGCGAACGCGCGCTGCGCAAGACCGCCGA GGAATGCCGCCAGGAACAGGAGAAGGCCAAGGCGGAACTGCCCGGGTTGAAAAAGGAACGGCAGAAACTGGACCGCAAGG CGGAGGGGTATGCGGAAGAGGCGAGGAGGCTGGATCAGGAGATCAAGCAGAAGGAGGGGAAGCTGAAACGGAAATGTCTC ACAGGGAATATTCCCTGCCTGCCAGCAGATGAAACAAAAAGAGGGGCTCTCAACCTGGAGATTGCAAAAATGATCAACGC ATCTCTAGGAACAAAAATAGACTTGGCGCCAATTGCCAAATGGGAAGGCGTCTATCTTAAATCCTATGTACCGTGGTGGC CGGTCAACGAACCTGATGGCGGACCTTCGATGTCAAAAAGAGACGGAAACACCAGACTGCAAGGCAAAATGAAAAACGGA GACCCAAACAACTCCGGCGTGACAATTGCTAAAGGGATAGATTTCGGAGGTCAAGACTATAATGTATATAAAAAAGAATT GGAGAAATTCAACAAAAGAAATAAAATTATTGCAGAGGAAGATTTTGACAAATTATCCGAGAAAATAAAACCATATTTTG GCAAGATAGGTGGAGAAGCATGCGCGCTTGCCCGAAAAAACCCTTTGGAAATCACACAAAAAGAAGCTGATTTATTGAAT CTACGTGCTGGCGAAGAAGCCACCAGAAGAGCAATAGAACTCTTTGAGAAAAAAATCCAGAGGGCTCCCCAAGATTTATA G
Upstream 100 bases:
>100_bases CGTCGTGCCGGCGCATGGATCGTGACGTGAAGCCACCACACGACCCGGGCCCGCCCGCCCCCCACTCCATCGATACCGAC ACCGAAGGACCCCGACACCC
Downstream 100 bases:
>100_bases ATTTGACAACTGAACAACAGACTGCCTTACTCTCCAATGTCTACCAAACTTGGGGTATCCATCCAAAAATGAAACAGGCA ATTTTGGAAGGCGATCGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MALKEEDLPDYDKDALSRERALRKTAEECRQEQEKAKAELPGLKKERQKLDRKAEGYAEEARRLDQEIKQKEGKLKRKCL TGNIPCLPADETKRGALNLEIAKMINASLGTKIDLAPIAKWEGVYLKSYVPWWPVNEPDGGPSMSKRDGNTRLQGKMKNG DPNNSGVTIAKGIDFGGQDYNVYKKELEKFNKRNKIIAEEDFDKLSEKIKPYFGKIGGEACALARKNPLEITQKEADLLN LRAGEEATRRAIELFEKKIQRAPQDL
Sequences:
>Translated_266_residues MALKEEDLPDYDKDALSRERALRKTAEECRQEQEKAKAELPGLKKERQKLDRKAEGYAEEARRLDQEIKQKEGKLKRKCL TGNIPCLPADETKRGALNLEIAKMINASLGTKIDLAPIAKWEGVYLKSYVPWWPVNEPDGGPSMSKRDGNTRLQGKMKNG DPNNSGVTIAKGIDFGGQDYNVYKKELEKFNKRNKIIAEEDFDKLSEKIKPYFGKIGGEACALARKNPLEITQKEADLLN LRAGEEATRRAIELFEKKIQRAPQDL >Mature_265_residues ALKEEDLPDYDKDALSRERALRKTAEECRQEQEKAKAELPGLKKERQKLDRKAEGYAEEARRLDQEIKQKEGKLKRKCLT GNIPCLPADETKRGALNLEIAKMINASLGTKIDLAPIAKWEGVYLKSYVPWWPVNEPDGGPSMSKRDGNTRLQGKMKNGD PNNSGVTIAKGIDFGGQDYNVYKKELEKFNKRNKIIAEEDFDKLSEKIKPYFGKIGGEACALARKNPLEITQKEADLLNL RAGEEATRRAIELFEKKIQRAPQDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30147; Mature: 30016
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALKEEDLPDYDKDALSRERALRKTAEECRQEQEKAKAELPGLKKERQKLDRKAEGYAEE CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ARRLDQEIKQKEGKLKRKCLTGNIPCLPADETKRGALNLEIAKMINASLGTKIDLAPIAK HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEECCCCCCC WEGVYLKSYVPWWPVNEPDGGPSMSKRDGNTRLQGKMKNGDPNNSGVTIAKGIDFGGQDY CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECEECCCCCCCCCEEEEECCCCCCCCH NVYKKELEKFNKRNKIIAEEDFDKLSEKIKPYFGKIGGEACALARKNPLEITQKEADLLN HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHH LRAGEEATRRAIELFEKKIQRAPQDL CCCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ALKEEDLPDYDKDALSRERALRKTAEECRQEQEKAKAELPGLKKERQKLDRKAEGYAEE CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ARRLDQEIKQKEGKLKRKCLTGNIPCLPADETKRGALNLEIAKMINASLGTKIDLAPIAK HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEECCCCCCC WEGVYLKSYVPWWPVNEPDGGPSMSKRDGNTRLQGKMKNGDPNNSGVTIAKGIDFGGQDY CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECEECCCCCCCCCEEEEECCCCCCCCH NVYKKELEKFNKRNKIIAEEDFDKLSEKIKPYFGKIGGEACALARKNPLEITQKEADLLN HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHH LRAGEEATRRAIELFEKKIQRAPQDL CCCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA