| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120608940
Identifier: 120608940
GI number: 120608940
Start: 265625
End: 266227
Strand: Reverse
Name: 120608940
Synonym: Aave_0237
Alternate gene names: NA
Gene position: 266227-265625 (Counterclockwise)
Preceding gene: 120608941
Following gene: 120608939
Centisome position: 4.97
GC content: 69.98
Gene sequence:
>603_bases ATGGCCTCTCTCAGCCTCCCCCGCTTCATCGCCCACCTGCGCAGCGACGCTGCCAACCTTTACGCCCTGATCGACTCCGC CCGCGACCATTCCCTGGTAACGCAGATGCGGCAGGCGAACATCGAACACCACTGCCTGTTTTCCGGCGTGAAGGCGCTCA CGCTCGCGCGCGTGGCTCCTTACCTGGTGCCTATGGCCGCGTTGGCGCCGCACCTGGAGCGGCTCGTGCCCTATGCCTGG GGCGGGGCCTGGAGCATGGTCGTGCGTGGCACGGCCGGCGTGGAGGCCACGCGCATCCAGCTCAAGAAAAGCAGCCTGGT GCGGCTGCCGGACGGTCGGTCGGCGTATTTCCGCTTCTATGACGCGCGGGTGTTCGACCGCTTCATGCGCATCGGCACCG AGGGGCAGCTGCGCTGGATGCTGGGCGACCGGCTGGACGGGCTGACCTGGGTGAGCGGCGGGGACGCGACACGCACGCGC ACCGTCCGCCATGGCCCCGCGCGCAAGGGGCTGTGGGGCCTGGTGCCGGCCACGGTCCCTTTGCGGGTGACGGAGCACCA TTGGGCCGACATGGCCGGCACGCGGGAAGGAGCCCGCCCATGA
Upstream 100 bases:
>100_bases GACACGAAAGACGGCGATGAATGCGAAATCTTCTGCCGCAGCGTCCGTCCGGCAGAGCCCCGGCAGCGCACTGCTGCCCG CTGACCGAAACACCCCAGCC
Downstream 100 bases:
>100_bases CGGTGATGGCATTCACCCCGGAGCAGATGGAGCATGCCGCCCTGGAAGAGGCGCAGCGCTGGATCGTGCAGGTGGCGCGG CGCTGGTTCCGGCTGGAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MASLSLPRFIAHLRSDAANLYALIDSARDHSLVTQMRQANIEHHCLFSGVKALTLARVAPYLVPMAALAPHLERLVPYAW GGAWSMVVRGTAGVEATRIQLKKSSLVRLPDGRSAYFRFYDARVFDRFMRIGTEGQLRWMLGDRLDGLTWVSGGDATRTR TVRHGPARKGLWGLVPATVPLRVTEHHWADMAGTREGARP
Sequences:
>Translated_200_residues MASLSLPRFIAHLRSDAANLYALIDSARDHSLVTQMRQANIEHHCLFSGVKALTLARVAPYLVPMAALAPHLERLVPYAW GGAWSMVVRGTAGVEATRIQLKKSSLVRLPDGRSAYFRFYDARVFDRFMRIGTEGQLRWMLGDRLDGLTWVSGGDATRTR TVRHGPARKGLWGLVPATVPLRVTEHHWADMAGTREGARP >Mature_199_residues ASLSLPRFIAHLRSDAANLYALIDSARDHSLVTQMRQANIEHHCLFSGVKALTLARVAPYLVPMAALAPHLERLVPYAWG GAWSMVVRGTAGVEATRIQLKKSSLVRLPDGRSAYFRFYDARVFDRFMRIGTEGQLRWMLGDRLDGLTWVSGGDATRTRT VRHGPARKGLWGLVPATVPLRVTEHHWADMAGTREGARP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22269; Mature: 22138
Theoretical pI: Translated: 11.28; Mature: 11.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASLSLPRFIAHLRSDAANLYALIDSARDHSLVTQMRQANIEHHCLFSGVKALTLARVAP CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH YLVPMAALAPHLERLVPYAWGGAWSMVVRGTAGVEATRIQLKKSSLVRLPDGRSAYFRFY HHHHHHHHHHHHHHHCCHHCCCCEEEEEECCCCCCHHHEEEECCCEEECCCCCCHHHHHH DARVFDRFMRIGTEGQLRWMLGDRLDGLTWVSGGDATRTRTVRHGPARKGLWGLVPATVP HHHHHHHHHHCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCEECCCCCEE LRVTEHHWADMAGTREGARP EEECCHHHHHHCCCCCCCCC >Mature Secondary Structure ASLSLPRFIAHLRSDAANLYALIDSARDHSLVTQMRQANIEHHCLFSGVKALTLARVAP CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH YLVPMAALAPHLERLVPYAWGGAWSMVVRGTAGVEATRIQLKKSSLVRLPDGRSAYFRFY HHHHHHHHHHHHHHHCCHHCCCCEEEEEECCCCCCHHHEEEECCCEEECCCCCCHHHHHH DARVFDRFMRIGTEGQLRWMLGDRLDGLTWVSGGDATRTRTVRHGPARKGLWGLVPATVP HHHHHHHHHHCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCEECCCCCEE LRVTEHHWADMAGTREGARP EEECCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA