Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is 120608932

Identifier: 120608932

GI number: 120608932

Start: 254773

End: 255759

Strand: Reverse

Name: 120608932

Synonym: Aave_0228

Alternate gene names: NA

Gene position: 255759-254773 (Counterclockwise)

Preceding gene: 120608935

Following gene: 120608931

Centisome position: 4.78

GC content: 68.79

Gene sequence:

>987_bases
ATGAAGCATTCCCCGTCCCCCCTGCGCCGCGCCCTGCTCGGCGCAACGGTCCTGGCCGCCTGCGCCGCGGCCCCCGCGCT
GGCCCAGGACTATCCCGCCAAGACCGTGCGCCTCATCGTGCCGTTCGCTCCCGGCGGCACGACCGACATCGTGGCGCGCG
TGGTTTCGCAATCGCTGGGCACCACGCTCGGCCAGCCGGTCGTCGTGGACAACAGGGCCGGCGCGGGCGGCGTGGTCGGC
GCGACGGAAATCGCCCGCGCAGCGCCGGACGGCTACACGCTGGGCGTGGCCACGGTGTCCTCCGTGGCCTCCGCGCCCGC
GATCAACCCGGCGGTGAAATACAACCCGCTGACGGACTTCACCTCGATCATCAACATGGCGGCCACGCCCAACGTGCTGG
CCGTGCACCCGAGCTTCCCGGCGAAGGACTTCAAGTCGTTCATGACCGAGGTCAAGGCCCACCCCGGCAAGTACGCGTTC
GCCACCTCCGGCACCGGCGGAATCGGCCACCTGCAGATGGAGCTGTTCAAGTCGCTGTCCGGCCTGGGGCTGGAGCACAT
CGGGTACAAGGGCGCCGGCCCGGCCCTCAACGACGCGGTGGCCGGCCAGGTGCCGATGATCTTCGACAACCTGCCGTCCG
CGCTGCCGTTCATCAAGGAGAAGCGGCTCATCGCGATCGCGGTGGCGGCGCCGCAGCGCCTGCCCTCGATGCCCGACGTG
CCCACCTTCAAGGAAGTCGGCTTCGAGCCCGTGAACCGGATGGCGTTCTACGGCATCCACGGTCCGAAGAACCTGCCGCG
CGAAGTGGTGGACAAGATCTCGCAGGCCGTGAAGAAGACCCTGGAAGACCCGGCCGTGCGCCAGCGCATCGAGGATACGG
GCTCGCTCGTCGTGGGGAACACGCCGGAGGAGTTCACGGCGCAGACCAAGGCCGAGTACGAGCTCTACAAAGGCGTGGTG
GCCAAGCAGAAGCTCAAGCTCGACTGA

Upstream 100 bases:

>100_bases
CATGGCATCCGCCCGCGGCATGGCACGCAAGCTGCAAATGGCATTCCCCGTCGCCGCAGCCGGCAGACCGAAAACACCTT
ATCCACAGGAGACATCCGAC

Downstream 100 bases:

>100_bases
GCCGGCGGGCGGAGCGCCGCCCGTCGCCGATTTCCCACTGCCGTGTTCAAGGTGCGGCAGGTGCTGCCGATACTCCTGAA
GGCCTGCACGGGCGCCCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MKHSPSPLRRALLGATVLAACAAAPALAQDYPAKTVRLIVPFAPGGTTDIVARVVSQSLGTTLGQPVVVDNRAGAGGVVG
ATEIARAAPDGYTLGVATVSSVASAPAINPAVKYNPLTDFTSIINMAATPNVLAVHPSFPAKDFKSFMTEVKAHPGKYAF
ATSGTGGIGHLQMELFKSLSGLGLEHIGYKGAGPALNDAVAGQVPMIFDNLPSALPFIKEKRLIAIAVAAPQRLPSMPDV
PTFKEVGFEPVNRMAFYGIHGPKNLPREVVDKISQAVKKTLEDPAVRQRIEDTGSLVVGNTPEEFTAQTKAEYELYKGVV
AKQKLKLD

Sequences:

>Translated_328_residues
MKHSPSPLRRALLGATVLAACAAAPALAQDYPAKTVRLIVPFAPGGTTDIVARVVSQSLGTTLGQPVVVDNRAGAGGVVG
ATEIARAAPDGYTLGVATVSSVASAPAINPAVKYNPLTDFTSIINMAATPNVLAVHPSFPAKDFKSFMTEVKAHPGKYAF
ATSGTGGIGHLQMELFKSLSGLGLEHIGYKGAGPALNDAVAGQVPMIFDNLPSALPFIKEKRLIAIAVAAPQRLPSMPDV
PTFKEVGFEPVNRMAFYGIHGPKNLPREVVDKISQAVKKTLEDPAVRQRIEDTGSLVVGNTPEEFTAQTKAEYELYKGVV
AKQKLKLD
>Mature_328_residues
MKHSPSPLRRALLGATVLAACAAAPALAQDYPAKTVRLIVPFAPGGTTDIVARVVSQSLGTTLGQPVVVDNRAGAGGVVG
ATEIARAAPDGYTLGVATVSSVASAPAINPAVKYNPLTDFTSIINMAATPNVLAVHPSFPAKDFKSFMTEVKAHPGKYAF
ATSGTGGIGHLQMELFKSLSGLGLEHIGYKGAGPALNDAVAGQVPMIFDNLPSALPFIKEKRLIAIAVAAPQRLPSMPDV
PTFKEVGFEPVNRMAFYGIHGPKNLPREVVDKISQAVKKTLEDPAVRQRIEDTGSLVVGNTPEEFTAQTKAEYELYKGVV
AKQKLKLD

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 34417; Mature: 34417

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHSPSPLRRALLGATVLAACAAAPALAQDYPAKTVRLIVPFAPGGTTDIVARVVSQSLG
CCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHH
TTLGQPVVVDNRAGAGGVVGATEIARAAPDGYTLGVATVSSVASAPAINPAVKYNPLTDF
HHCCCCEEEECCCCCCCCCCHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCCCCCCCHHHH
TSIINMAATPNVLAVHPSFPAKDFKSFMTEVKAHPGKYAFATSGTGGIGHLQMELFKSLS
HHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHH
GLGLEHIGYKGAGPALNDAVAGQVPMIFDNLPSALPFIKEKRLIAIAVAAPQRLPSMPDV
CCCHHHCCCCCCCCCCHHHHCCCCCHHHHCCCHHHHHHHCCCEEEEEEECHHHCCCCCCC
PTFKEVGFEPVNRMAFYGIHGPKNLPREVVDKISQAVKKTLEDPAVRQRIEDTGSLVVGN
CCHHHCCCCHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEECC
TPEEFTAQTKAEYELYKGVVAKQKLKLD
CCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKHSPSPLRRALLGATVLAACAAAPALAQDYPAKTVRLIVPFAPGGTTDIVARVVSQSLG
CCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHH
TTLGQPVVVDNRAGAGGVVGATEIARAAPDGYTLGVATVSSVASAPAINPAVKYNPLTDF
HHCCCCEEEECCCCCCCCCCHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCCCCCCCHHHH
TSIINMAATPNVLAVHPSFPAKDFKSFMTEVKAHPGKYAFATSGTGGIGHLQMELFKSLS
HHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHH
GLGLEHIGYKGAGPALNDAVAGQVPMIFDNLPSALPFIKEKRLIAIAVAAPQRLPSMPDV
CCCHHHCCCCCCCCCCHHHHCCCCCHHHHCCCHHHHHHHCCCEEEEEEECHHHCCCCCCC
PTFKEVGFEPVNRMAFYGIHGPKNLPREVVDKISQAVKKTLEDPAVRQRIEDTGSLVVGN
CCHHHCCCCHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEECC
TPEEFTAQTKAEYELYKGVVAKQKLKLD
CCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3299368 [H]