| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120608842
Identifier: 120608842
GI number: 120608842
Start: 144664
End: 145089
Strand: Reverse
Name: 120608842
Synonym: Aave_0134
Alternate gene names: NA
Gene position: 145089-144664 (Counterclockwise)
Preceding gene: 120608843
Following gene: 120608839
Centisome position: 2.71
GC content: 69.25
Gene sequence:
>426_bases ATGAAGATCCTCCTTGCCGTCGATGGCAGCGCCTATACCAAGAAGATGCTGGCCTACCTCGCCACGCACGACGAACTGCT CGCCGGCGGCACGCACGACGTGACCGCGATCACCGTGCAGTCGCCCCTGCCGCCCCGGGCCCGCGCCGCGCTGGGCAAGG ACGTGGTCGAGAAGTACTACGCCGACGAGGCCGAGAAGGTCATCGGTCCGGTGGCCAAGTTCCTGGCCCGCCACGGCATC ACCGCCAAGCGCCTCGTGAAGACCGGCCCCGTGGGCGAAACCATCGCCAAGGCCGCCGATGCGGGCAAGTTCGACCTGCT GGTCATGGGTTCCCACGGCCACGGCGCCCTGGGCCAGCTCGTCATGGGCTCGGTCAGCACCCAGGTGCTGGCCAGCAGCC GGGTGCCGGTGCTGCTGGTGCGCTGA
Upstream 100 bases:
>100_bases GGCCCGCACGCGCACGGCAGCACAAAGATGACCCAGGTCAAGACAACAGGCACAGGCGCGCTTTAGTCTTCCTTCATCCT TTCGTGAAAGCCTTTCCACC
Downstream 100 bases:
>100_bases GGGACGAGGCTACGGACCGGCAGGAGGGGCTCCTGACCATGGCGGTGGGCACGCGCAACGCGGCGGACTTCCAACCCACG GGGTGACCATCGATCCGTGG
Product: UspA domain-containing protein
Products: NA
Alternate protein names: UspA Domain Protein; Universal Stress Protein UspA; Uspa Domain Protein; Universal Stress Protein
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MKILLAVDGSAYTKKMLAYLATHDELLAGGTHDVTAITVQSPLPPRARAALGKDVVEKYYADEAEKVIGPVAKFLARHGI TAKRLVKTGPVGETIAKAADAGKFDLLVMGSHGHGALGQLVMGSVSTQVLASSRVPVLLVR
Sequences:
>Translated_141_residues MKILLAVDGSAYTKKMLAYLATHDELLAGGTHDVTAITVQSPLPPRARAALGKDVVEKYYADEAEKVIGPVAKFLARHGI TAKRLVKTGPVGETIAKAADAGKFDLLVMGSHGHGALGQLVMGSVSTQVLASSRVPVLLVR >Mature_141_residues MKILLAVDGSAYTKKMLAYLATHDELLAGGTHDVTAITVQSPLPPRARAALGKDVVEKYYADEAEKVIGPVAKFLARHGI TAKRLVKTGPVGETIAKAADAGKFDLLVMGSHGHGALGQLVMGSVSTQVLASSRVPVLLVR
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14757; Mature: 14757
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILLAVDGSAYTKKMLAYLATHDELLAGGTHDVTAITVQSPLPPRARAALGKDVVEKYY CEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHH ADEAEKVIGPVAKFLARHGITAKRLVKTGPVGETIAKAADAGKFDLLVMGSHGHGALGQL HHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHCCCCCEEEEEECCCCCCHHHHH VMGSVSTQVLASSRVPVLLVR HHHHHHHHHHHCCCCCEEEEC >Mature Secondary Structure MKILLAVDGSAYTKKMLAYLATHDELLAGGTHDVTAITVQSPLPPRARAALGKDVVEKYY CEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHH ADEAEKVIGPVAKFLARHGITAKRLVKTGPVGETIAKAADAGKFDLLVMGSHGHGALGQL HHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHCCCCCEEEEEECCCCCCHHHHH VMGSVSTQVLASSRVPVLLVR HHHHHHHHHHHCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA