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The map label for this gene is dadA [H]

Identifier: 120608839

GI number: 120608839

Start: 141536

End: 142870

Strand: Reverse

Name: dadA [H]

Synonym: Aave_0131

Alternate gene names: 120608839

Gene position: 142870-141536 (Counterclockwise)

Preceding gene: 120608842

Following gene: 120608838

Centisome position: 2.67

GC content: 69.89

Gene sequence:

>1335_bases
ATGAAAACCATCGTCCTCGGAGCCGGCATCATCGGCATCAGCACCGCGTGGCACCTGCTCGAGCGCGGCCATGACGTCAT
CGTCGTCGATCGCCAGCCCGATGCGTCGCTGGAGACCAGCTACGCCAATGCGGCGCAGATCTCGGTGAGCTATTGCGAGC
CCTGGGCGAACCGCGAAGCGCCCTGGAAGGCGCTCAAGTGGATGTTCGACAAGGAGGCCCCGCTGCTGTTCCGTCCCCAG
CTGGACTGGGACCAGTGGCGCTGGAGCCTGAAGTTCCTCGCGCAGTGCAACGACGCCGCCTTCGCCCGCAACGTGCAGCA
GATCGTGGCCCTGGGCGCCTACAGCCACGCCGCGCTGAAAGACATGGTGCGCTCCACCGGCATCGAATACCACCGGCTCG
AGCGCGGCATCGCGCATTTCTACACCGACCAGAAATCCTTCGACGCGGCCGGCAAGGCCGTGGACCTGATGCGCCAGTAC
GGCGTGCAGCGCCGGCTCGTGAGCCGCGACGAGCTGCTGCAGATCGAGCCGGCGTTCCGCGCCTATGGCGACCGCATCAC
CGGCGGCACCTACACCAGCACCGACGAAAGCGGCGACGCCCGGGTGTTCACCCAGGCGCTGGCACGCCGCTGCGCCGAGC
GGGGTGCGCAGTTCCTCTTCGGGCACGACGTGCTGCGGCTGCAGCGCACGGGCGATGCCATCGACACCGTGACGGTGCGC
TCCCGCGAGCCCGGCTCGGCCGCGCAGGAACTGCGAGCCGACGCGTTCGTGGTGGCCTGCGGCTCCTACACGGCGCCGCT
GCTGCGCACGGTGGGCGTGGATCTGCCCATCTACCCCGGCAAGGGCTACAGCGCCACGTTCCCGCTGCTCAAGCCCGAGG
GCGCGCCGATGGTCTCCACCATCGACGACGGCAAGAAGATCGCGATGAGCCGCCTGGGCAATTTCCTGCGCGTGGCCGGC
ACGATCGAGCTGGGAGGCTTCGACCTCTCCCTGGACAGCCCGGTGGCCCGCGCGCGCTGCCACATGCTCTCGCGCCGCAT
CGCCGAGATCCTGCCCGGCGTGTGCGACACGCGCACGCCCGAGGAAGGCGGCGATCCGCAGTACTGGACCGGGCTGCGCC
CCGCCACGCCGACCAACATCCCCTTCATCGGCCGCACCCGCGTGGGCAAGCTCTGGGTGAACGCGGGGCATGGCACGCTG
GGCTGGACGCACGGCGCAGGTTCGGGCAAGGCGATGGCCGAGCTGTTGAGCGGCGAACGGCCCGCGATGGACTTCGGCTT
CCTGGGTTTCGGCACGCAGGGCCGCCAGGCGAGCGGCACGCCCGTCACCGCCTGA

Upstream 100 bases:

>100_bases
AAGGTGCTCATGGCGGCCGGCTCATTAGATGAACTGATGAATTTGGAGGAAGTTTAATTCCTCTTCAAAAAAAACGGACA
CCGCAGCACACTGCGGAGCC

Downstream 100 bases:

>100_bases
CCCGGGCGACACGGCCGGCGGCGCGCGAGGCTACCATCGCGCGCATGCCGTCCTCCTCCCCCCACCTTCTTTTCCTGAAC
GCCTCCACCCGCGAGCCGGG

Product: D-amino-acid dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MKTIVLGAGIIGISTAWHLLERGHDVIVVDRQPDASLETSYANAAQISVSYCEPWANREAPWKALKWMFDKEAPLLFRPQ
LDWDQWRWSLKFLAQCNDAAFARNVQQIVALGAYSHAALKDMVRSTGIEYHRLERGIAHFYTDQKSFDAAGKAVDLMRQY
GVQRRLVSRDELLQIEPAFRAYGDRITGGTYTSTDESGDARVFTQALARRCAERGAQFLFGHDVLRLQRTGDAIDTVTVR
SREPGSAAQELRADAFVVACGSYTAPLLRTVGVDLPIYPGKGYSATFPLLKPEGAPMVSTIDDGKKIAMSRLGNFLRVAG
TIELGGFDLSLDSPVARARCHMLSRRIAEILPGVCDTRTPEEGGDPQYWTGLRPATPTNIPFIGRTRVGKLWVNAGHGTL
GWTHGAGSGKAMAELLSGERPAMDFGFLGFGTQGRQASGTPVTA

Sequences:

>Translated_444_residues
MKTIVLGAGIIGISTAWHLLERGHDVIVVDRQPDASLETSYANAAQISVSYCEPWANREAPWKALKWMFDKEAPLLFRPQ
LDWDQWRWSLKFLAQCNDAAFARNVQQIVALGAYSHAALKDMVRSTGIEYHRLERGIAHFYTDQKSFDAAGKAVDLMRQY
GVQRRLVSRDELLQIEPAFRAYGDRITGGTYTSTDESGDARVFTQALARRCAERGAQFLFGHDVLRLQRTGDAIDTVTVR
SREPGSAAQELRADAFVVACGSYTAPLLRTVGVDLPIYPGKGYSATFPLLKPEGAPMVSTIDDGKKIAMSRLGNFLRVAG
TIELGGFDLSLDSPVARARCHMLSRRIAEILPGVCDTRTPEEGGDPQYWTGLRPATPTNIPFIGRTRVGKLWVNAGHGTL
GWTHGAGSGKAMAELLSGERPAMDFGFLGFGTQGRQASGTPVTA
>Mature_444_residues
MKTIVLGAGIIGISTAWHLLERGHDVIVVDRQPDASLETSYANAAQISVSYCEPWANREAPWKALKWMFDKEAPLLFRPQ
LDWDQWRWSLKFLAQCNDAAFARNVQQIVALGAYSHAALKDMVRSTGIEYHRLERGIAHFYTDQKSFDAAGKAVDLMRQY
GVQRRLVSRDELLQIEPAFRAYGDRITGGTYTSTDESGDARVFTQALARRCAERGAQFLFGHDVLRLQRTGDAIDTVTVR
SREPGSAAQELRADAFVVACGSYTAPLLRTVGVDLPIYPGKGYSATFPLLKPEGAPMVSTIDDGKKIAMSRLGNFLRVAG
TIELGGFDLSLDSPVARARCHMLSRRIAEILPGVCDTRTPEEGGDPQYWTGLRPATPTNIPFIGRTRVGKLWVNAGHGTL
GWTHGAGSGKAMAELLSGERPAMDFGFLGFGTQGRQASGTPVTA

Specific function: Oxidative deamination of D-amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=427, Percent_Identity=38.1733021077283, Blast_Score=306, Evalue=2e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 48608; Mature: 48608

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIVLGAGIIGISTAWHLLERGHDVIVVDRQPDASLETSYANAAQISVSYCEPWANREA
CCEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCC
PWKALKWMFDKEAPLLFRPQLDWDQWRWSLKFLAQCNDAAFARNVQQIVALGAYSHAALK
CHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHH
DMVRSTGIEYHRLERGIAHFYTDQKSFDAAGKAVDLMRQYGVQRRLVSRDELLQIEPAFR
HHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHCCCCCEEEECHHHH
AYGDRITGGTYTSTDESGDARVFTQALARRCAERGAQFLFGHDVLRLQRTGDAIDTVTVR
HCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCEEECCHHEEEECCCCCEEEEEEE
SREPGSAAQELRADAFVVACGSYTAPLLRTVGVDLPIYPGKGYSATFPLLKPEGAPMVST
CCCCCHHHHHHCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCEEEE
IDDGKKIAMSRLGNFLRVAGTIELGGFDLSLDSPVARARCHMLSRRIAEILPGVCDTRTP
CCCHHHHHHHHCCCCEEEEEEEEECCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
EEGGDPQYWTGLRPATPTNIPFIGRTRVGKLWVNAGHGTLGWTHGAGSGKAMAELLSGER
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCC
PAMDFGFLGFGTQGRQASGTPVTA
CCCCCCEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKTIVLGAGIIGISTAWHLLERGHDVIVVDRQPDASLETSYANAAQISVSYCEPWANREA
CCEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCC
PWKALKWMFDKEAPLLFRPQLDWDQWRWSLKFLAQCNDAAFARNVQQIVALGAYSHAALK
CHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHH
DMVRSTGIEYHRLERGIAHFYTDQKSFDAAGKAVDLMRQYGVQRRLVSRDELLQIEPAFR
HHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHCCCCCEEEECHHHH
AYGDRITGGTYTSTDESGDARVFTQALARRCAERGAQFLFGHDVLRLQRTGDAIDTVTVR
HCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCEEECCHHEEEECCCCCEEEEEEE
SREPGSAAQELRADAFVVACGSYTAPLLRTVGVDLPIYPGKGYSATFPLLKPEGAPMVST
CCCCCHHHHHHCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCEEEE
IDDGKKIAMSRLGNFLRVAGTIELGGFDLSLDSPVARARCHMLSRRIAEILPGVCDTRTP
CCCHHHHHHHHCCCCEEEEEEEEECCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
EEGGDPQYWTGLRPATPTNIPFIGRTRVGKLWVNAGHGTLGWTHGAGSGKAMAELLSGER
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCC
PAMDFGFLGFGTQGRQASGTPVTA
CCCCCCEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA