| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is ywqN [H]
Identifier: 120608838
GI number: 120608838
Start: 140922
End: 141491
Strand: Reverse
Name: ywqN [H]
Synonym: Aave_0130
Alternate gene names: 120608838
Gene position: 141491-140922 (Counterclockwise)
Preceding gene: 120608839
Following gene: 120608835
Centisome position: 2.64
GC content: 71.05
Gene sequence:
>570_bases ATGCCGTCCTCCTCCCCCCACCTTCTTTTCCTGAACGCCTCCACCCGCGAGCCGGGCCACATCGGCAACACCGAATGGCT GGCCCGGCAGGCCGCGGCCACGCTGCCCGCAGGCACGGCCCAGACCTGGCTGCACCTCGCCCGCCTCGACCTGCCGCCGT TCGTGGACCTGCGCCACACCACCGGCACCTACCCCGCGCCCGAAGGCGATCTGCGCACGCTGCTGGATGCCACGCTCGCG GCGTCCGAGATCGTGTTCGTGTCGCCCGTTTACTGGTTCAGCATTCCTTCGACGCTCAAGACCTACCTGGACCACTGGAG CGCCTGGATGCGCGTGCCGGGCCTGGAGTTCAAGGAGCGCATGGCCGGCAAGGCGCTCAGCCTGGTCACGACCAGCGGCG ACCGCGCCAAGGCACAGCCGATGATCGATTCGGTGCAGCTGTGCGCCCAGTTCCTGGGCATGCGCTACCGGGGCGCGCTC TGGGGCAAGGGCGGGCCGCCGGGCGCGGTGCAGGCGGAAGCGGCGGCCGTGCGAGAGGCCGCGAGCTTCCTGGCGGCGCC CCTTTCCTGA
Upstream 100 bases:
>100_bases TCCTGGGTTTCGGCACGCAGGGCCGCCAGGCGAGCGGCACGCCCGTCACCGCCTGACCCGGGCGACACGGCCGGCGGCGC GCGAGGCTACCATCGCGCGC
Downstream 100 bases:
>100_bases GAATCTACCGCGCAGGGGTGCCGGCGGCCGGTGTATCGGTGGCGGCCAGGTGGGTATCCATCCACCGCAGCAGGTCCACC CACATCTGGCGCACCTGGCT
Product: NAD(P)H dehydrogenase (quinone)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MPSSSPHLLFLNASTREPGHIGNTEWLARQAAATLPAGTAQTWLHLARLDLPPFVDLRHTTGTYPAPEGDLRTLLDATLA ASEIVFVSPVYWFSIPSTLKTYLDHWSAWMRVPGLEFKERMAGKALSLVTTSGDRAKAQPMIDSVQLCAQFLGMRYRGAL WGKGGPPGAVQAEAAAVREAASFLAAPLS
Sequences:
>Translated_189_residues MPSSSPHLLFLNASTREPGHIGNTEWLARQAAATLPAGTAQTWLHLARLDLPPFVDLRHTTGTYPAPEGDLRTLLDATLA ASEIVFVSPVYWFSIPSTLKTYLDHWSAWMRVPGLEFKERMAGKALSLVTTSGDRAKAQPMIDSVQLCAQFLGMRYRGAL WGKGGPPGAVQAEAAAVREAASFLAAPLS >Mature_188_residues PSSSPHLLFLNASTREPGHIGNTEWLARQAAATLPAGTAQTWLHLARLDLPPFVDLRHTTGTYPAPEGDLRTLLDATLAA SEIVFVSPVYWFSIPSTLKTYLDHWSAWMRVPGLEFKERMAGKALSLVTTSGDRAKAQPMIDSVQLCAQFLGMRYRGALW GKGGPPGAVQAEAAAVREAASFLAAPLS
Specific function: Putative NADPH-dependent oxidoreductase (Potential) [H]
COG id: COG0655
COG function: function code R; Multimeric flavodoxin WrbA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 20399; Mature: 20267
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSSPHLLFLNASTREPGHIGNTEWLARQAAATLPAGTAQTWLHLARLDLPPFVDLRHT CCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEECCC TGTYPAPEGDLRTLLDATLAASEIVFVSPVYWFSIPSTLKTYLDHWSAWMRVPGLEFKER CCCCCCCCHHHHHHHHHHHHHCCEEEECCHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHH MAGKALSLVTTSGDRAKAQPMIDSVQLCAQFLGMRYRGALWGKGGPPGAVQAEAAAVREA HCCCEEEEEECCCCCCHHCHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCHHHHHHHHHH ASFLAAPLS HHHHHCCCC >Mature Secondary Structure PSSSPHLLFLNASTREPGHIGNTEWLARQAAATLPAGTAQTWLHLARLDLPPFVDLRHT CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEECCC TGTYPAPEGDLRTLLDATLAASEIVFVSPVYWFSIPSTLKTYLDHWSAWMRVPGLEFKER CCCCCCCCHHHHHHHHHHHHHCCEEEECCHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHH MAGKALSLVTTSGDRAKAQPMIDSVQLCAQFLGMRYRGALWGKGGPPGAVQAEAAAVREA HCCCEEEEEECCCCCCHHCHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCHHHHHHHHHH ASFLAAPLS HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]