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The map label for this gene is tse [H]

Identifier: 120608813

GI number: 120608813

Start: 109823

End: 111691

Strand: Reverse

Name: tse [H]

Synonym: Aave_0104

Alternate gene names: 120608813

Gene position: 111691-109823 (Counterclockwise)

Preceding gene: 120608814

Following gene: 120608811

Centisome position: 2.09

GC content: 70.63

Gene sequence:

>1869_bases
ATGCAATTCCTACGCCGTCTCTCCCTGGGGTCGCGGCTGGCGCTGGGCTTCGGCCTGCTCCTGCTGCTGCTGGCCATCAT
CACCGGATTGGGCATCGCCCGCATGTCCACGCTCGACCATACGTCGCAGCAGATCACCACCGAGCTCTACGCCAAGGCGA
ATGCCAGCCAGCGCATGGGCTACCTGGTGCTGGACATCGCGCGGGCCGCGCGCAACATCATCATCCTGGAAGACCAAGCG
CAGATGGCGTCCAACAAGACCGTCATCGACAAGAACACGGCCGAGTTCGCCACCACGATCGCCCAGCTGCGCCAGCTCGA
GATGGCGCCGGAGATCCGCAGCCTCATCGACGCCGTGGACGCCAAGTCCAAGGAATACCTCGCCTTCACCACCGACGTGA
CGGCGCTCGGACTCTCCAACCAGAACCTCGAAGGGCAGAAGCTGCTCTTCGGCCCGCGCTACAAGTCGCAAGGCGAACTG
TTGGCGCTGCTGGCCCAGCTCGTGAAGCAGTACGAGGGCGAGATGCGGCAGGCCACCGCCAGCGCCCACGACACCTTCGT
GCAGTCGGCCACGGTGCTCGGCGTGGTGGCCCTGGTGGCCGTTCTGGCGGGCATCGCCGGCGCCGTCATGATCACCCGCT
CGATCACCGTCCCGATGGCCCGCGCGGTGGACGTGGCCCACGCCGTGGCCGAAGGCGACCTCACCCGCACGGTGGACGAC
AGCGGCCGCGACGAGGCGGCCCTGCTGCTGCAGTCGCTGCAGACCATGAACGGCAACCTCACCCGCGTGGTGCACCAGAT
CCGCCAGGCGAGCGACTCCATCGCCACCGGCTCCTCGCAGATCGCCAGCGGCAACGCCGACCTCTCCCAGCGCACGGAGT
CGCAGGCGTCCAGCCTGCAGCAGACCGCTGCCTCCATGGAGGAAATGAGCGCGACCATCCGCCAGAACGCCGACACGGCG
CGCACGGCCAGCCAGCTCGCCTCCACCGCCAGCCAAGCCGCGAGCCGCGGCGGCGACGTGATGGGCCAGGTGGTCGCGAC
GATGCAGGACATCTCGGGCAGCTCCAGCAAGATCGCCGACATCATCGGCGTGATCGACGGCATCGCTTTCCAGACCAACA
TCCTGGCGCTGAACGCGGCCGTGGAGGCTGCCCGCGCGGGCGAGCAGGGCCGCGGATTCGCCGTGGTGGCCGGAGAAGTG
CGCGCGCTGGCAGGGCGCAGCGCCGAGGCCGCCAAGGAAATCAAGAACCTCATCGGCCAGAGCGTGGAGAAGGTCGGCGC
GGGCACGCGCCTGGTGGACGAAGCTGGCGCCACCATGTCCGACATCGTGCAGCAGGTACAGCGCGTGAGCGATCTGATCG
CCGAGATCGACGCCGCCACGCGCGAGCAGAGCGAGGGCATCGGCCAGGTGAACGCGGCCGTGTCCCAGCTCGACCAGGCC
ACGCAGCAGAACGCCGCGCTGGTGGAGGAGTCCGCTGCCGCGGCCGGCAGCCTGCAACAGCAGGCCGTTCGCCTGACCGA
GGCCGTCGGTGTTTTCCGCCTGTCGGGCATGGCCGAGCGCGCGGCACCTGCGCCGGCCCCTGTCCACGTCCCTGCCGCCA
CGCCCCAGGCCAGTGCGGCACGCCCGGCAGCACGTCCCTCCCCTGCAGCCTCCCCGGCCCTGGGTGGCGGCAAGGCACCG
GCCGCGCAACTGGGCAGCACGCCCTCGGCCCCGTCCAGGCCCGCGCAACAGCCAGCGCCGCGCGCGGCCAAGGCTCCCGC
GGGTCCGGTTGCGGCCCCCAAGGCACCGGCCCTGCCGGCGGCCGCGACCAGGCCCGCCGCGAAGCCGGCCGCGCACAGCA
ACGCCGACGACGACTGGACCACGTTCTGA

Upstream 100 bases:

>100_bases
CCCCGTTCACCGTTGTTGCGTCTTGTCACATACTCGGGGCAGGTCGTCGTGCCTCGGGCGCCCGCGCGCCTGTCGCGGCT
GCCACGTTCAGAAAGTCGTT

Downstream 100 bases:

>100_bases
GCTCCTCCGGAGCCAGCCAGCGATGACGAGGCGCCTTCGGGCGCCTTTCTTTTTCTAGTCGGGATCCCGCCGCACCGGCG
GCAGGCGGCGTGGTGCCGGC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 622; Mature: 622

Protein sequence:

>622_residues
MQFLRRLSLGSRLALGFGLLLLLLAIITGLGIARMSTLDHTSQQITTELYAKANASQRMGYLVLDIARAARNIIILEDQA
QMASNKTVIDKNTAEFATTIAQLRQLEMAPEIRSLIDAVDAKSKEYLAFTTDVTALGLSNQNLEGQKLLFGPRYKSQGEL
LALLAQLVKQYEGEMRQATASAHDTFVQSATVLGVVALVAVLAGIAGAVMITRSITVPMARAVDVAHAVAEGDLTRTVDD
SGRDEAALLLQSLQTMNGNLTRVVHQIRQASDSIATGSSQIASGNADLSQRTESQASSLQQTAASMEEMSATIRQNADTA
RTASQLASTASQAASRGGDVMGQVVATMQDISGSSSKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEV
RALAGRSAEAAKEIKNLIGQSVEKVGAGTRLVDEAGATMSDIVQQVQRVSDLIAEIDAATREQSEGIGQVNAAVSQLDQA
TQQNAALVEESAAAAGSLQQQAVRLTEAVGVFRLSGMAERAAPAPAPVHVPAATPQASAARPAARPSPAASPALGGGKAP
AAQLGSTPSAPSRPAQQPAPRAAKAPAGPVAAPKAPALPAAATRPAAKPAAHSNADDDWTTF

Sequences:

>Translated_622_residues
MQFLRRLSLGSRLALGFGLLLLLLAIITGLGIARMSTLDHTSQQITTELYAKANASQRMGYLVLDIARAARNIIILEDQA
QMASNKTVIDKNTAEFATTIAQLRQLEMAPEIRSLIDAVDAKSKEYLAFTTDVTALGLSNQNLEGQKLLFGPRYKSQGEL
LALLAQLVKQYEGEMRQATASAHDTFVQSATVLGVVALVAVLAGIAGAVMITRSITVPMARAVDVAHAVAEGDLTRTVDD
SGRDEAALLLQSLQTMNGNLTRVVHQIRQASDSIATGSSQIASGNADLSQRTESQASSLQQTAASMEEMSATIRQNADTA
RTASQLASTASQAASRGGDVMGQVVATMQDISGSSSKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEV
RALAGRSAEAAKEIKNLIGQSVEKVGAGTRLVDEAGATMSDIVQQVQRVSDLIAEIDAATREQSEGIGQVNAAVSQLDQA
TQQNAALVEESAAAAGSLQQQAVRLTEAVGVFRLSGMAERAAPAPAPVHVPAATPQASAARPAARPSPAASPALGGGKAP
AAQLGSTPSAPSRPAQQPAPRAAKAPAGPVAAPKAPALPAAATRPAAKPAAHSNADDDWTTF
>Mature_622_residues
MQFLRRLSLGSRLALGFGLLLLLLAIITGLGIARMSTLDHTSQQITTELYAKANASQRMGYLVLDIARAARNIIILEDQA
QMASNKTVIDKNTAEFATTIAQLRQLEMAPEIRSLIDAVDAKSKEYLAFTTDVTALGLSNQNLEGQKLLFGPRYKSQGEL
LALLAQLVKQYEGEMRQATASAHDTFVQSATVLGVVALVAVLAGIAGAVMITRSITVPMARAVDVAHAVAEGDLTRTVDD
SGRDEAALLLQSLQTMNGNLTRVVHQIRQASDSIATGSSQIASGNADLSQRTESQASSLQQTAASMEEMSATIRQNADTA
RTASQLASTASQAASRGGDVMGQVVATMQDISGSSSKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEV
RALAGRSAEAAKEIKNLIGQSVEKVGAGTRLVDEAGATMSDIVQQVQRVSDLIAEIDAATREQSEGIGQVNAAVSQLDQA
TQQNAALVEESAAAAGSLQQQAVRLTEAVGVFRLSGMAERAAPAPAPVHVPAATPQASAARPAARPSPAASPALGGGKAP
AAQLGSTPSAPSRPAQQPAPRAAKAPAGPVAAPKAPALPAAATRPAAKPAAHSNADDDWTTF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=373, Percent_Identity=54.1554959785523, Blast_Score=320, Evalue=2e-88,
Organism=Escherichia coli, GI1788195, Length=339, Percent_Identity=55.7522123893805, Blast_Score=314, Evalue=1e-86,
Organism=Escherichia coli, GI1787690, Length=550, Percent_Identity=40.5454545454545, Blast_Score=302, Evalue=4e-83,
Organism=Escherichia coli, GI1788194, Length=338, Percent_Identity=52.9585798816568, Blast_Score=298, Evalue=7e-82,
Organism=Escherichia coli, GI1789453, Length=322, Percent_Identity=43.4782608695652, Blast_Score=233, Evalue=3e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 64142; Mature: 64142

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFLRRLSLGSRLALGFGLLLLLLAIITGLGIARMSTLDHTSQQITTELYAKANASQRMG
CCHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
YLVLDIARAARNIIILEDQAQMASNKTVIDKNTAEFATTIAQLRQLEMAPEIRSLIDAVD
HHHHHHHHHHCCEEEEECHHHHHCCCEEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHC
AKSKEYLAFTTDVTALGLSNQNLEGQKLLFGPRYKSQGELLALLAQLVKQYEGEMRQATA
CCCCCEEEEECCHHEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SAHDTFVQSATVLGVVALVAVLAGIAGAVMITRSITVPMARAVDVAHAVAEGDLTRTVDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
SGRDEAALLLQSLQTMNGNLTRVVHQIRQASDSIATGSSQIASGNADLSQRTESQASSLQ
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHH
QTAASMEEMSATIRQNADTARTASQLASTASQAASRGGDVMGQVVATMQDISGSSSKIAD
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHH
IIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRALAGRSAEAAKEIKNLIGQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHCCCHHHHHHHHHHHHH
SVEKVGAGTRLVDEAGATMSDIVQQVQRVSDLIAEIDAATREQSEGIGQVNAAVSQLDQA
HHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
TQQNAALVEESAAAAGSLQQQAVRLTEAVGVFRLSGMAERAAPAPAPVHVPAATPQASAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCEECCCCCCCCCCC
RPAARPSPAASPALGGGKAPAAQLGSTPSAPSRPAQQPAPRAAKAPAGPVAAPKAPALPA
CCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AATRPAAKPAAHSNADDDWTTF
CCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQFLRRLSLGSRLALGFGLLLLLLAIITGLGIARMSTLDHTSQQITTELYAKANASQRMG
CCHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
YLVLDIARAARNIIILEDQAQMASNKTVIDKNTAEFATTIAQLRQLEMAPEIRSLIDAVD
HHHHHHHHHHCCEEEEECHHHHHCCCEEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHC
AKSKEYLAFTTDVTALGLSNQNLEGQKLLFGPRYKSQGELLALLAQLVKQYEGEMRQATA
CCCCCEEEEECCHHEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SAHDTFVQSATVLGVVALVAVLAGIAGAVMITRSITVPMARAVDVAHAVAEGDLTRTVDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
SGRDEAALLLQSLQTMNGNLTRVVHQIRQASDSIATGSSQIASGNADLSQRTESQASSLQ
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHH
QTAASMEEMSATIRQNADTARTASQLASTASQAASRGGDVMGQVVATMQDISGSSSKIAD
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHH
IIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRALAGRSAEAAKEIKNLIGQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHCCCHHHHHHHHHHHHH
SVEKVGAGTRLVDEAGATMSDIVQQVQRVSDLIAEIDAATREQSEGIGQVNAAVSQLDQA
HHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
TQQNAALVEESAAAAGSLQQQAVRLTEAVGVFRLSGMAERAAPAPAPVHVPAATPQASAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCEECCCCCCCCCCC
RPAARPSPAASPALGGGKAPAAQLGSTPSAPSRPAQQPAPRAAKAPAGPVAAPKAPALPA
CCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AATRPAAKPAAHSNADDDWTTF
CCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]