Click here to switch to the map view.

The map label for this gene is 120608803

Identifier: 120608803

GI number: 120608803

Start: 99984

End: 100307

Strand: Reverse

Name: 120608803

Synonym: Aave_0094

Alternate gene names: NA

Gene position: 100307-99984 (Counterclockwise)

Preceding gene: 120608804

Following gene: 120608801

Centisome position: 1.87

GC content: 58.95

Gene sequence:

>324_bases
GTGACGAGCCAGGAGCGCGTCGCCCCATGCTTTTTCGCCGTCCTCTTCACCGACAGGCCCTACCAGGGTGACGTGCGGGC
CGCACATCTCCAGGCGCACATTGCCTGGCTGGAGCAGCACAAGGAAATCATTCCGGTCGGGGGCTTGCTGCGGCAGGAAA
TGGGGCAGACGCCGAAAGGCGGATTGTGGGTGGCCGAAGCGGATTCGAAAGAACAGATCGAAGAGCTGTTGAAGTCGGAT
CCCTTCTTCATTGCCGGGCTCAGACAAAGCCATGAAATCCTGCATTGGTGCAAAGCCAATGCTGATCGCAAGGCGCTCTT
TTGA

Upstream 100 bases:

>100_bases
TGCTGGACGAGACCGGGCCGGGGGCCGTGGGGATGATGCGGGCGATCAAGCAGGCGCTGGATCCGAAGAACATTTTGAAT
CCGGGGAAGATTTTCGAGAT

Downstream 100 bases:

>100_bases
TGCCGGTCTGCTTCTAAGAGCGGCTAACGCCACCGGTCCACAAGCGCGCACAGATGATCGCTGCAGCCAGTTTCAACAGC
GCTTCGTGGATGTCCAGCCG

Product: YCII-like protein

Products: NA

Alternate protein names: YCII-Related Domain Protein

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MTSQERVAPCFFAVLFTDRPYQGDVRAAHLQAHIAWLEQHKEIIPVGGLLRQEMGQTPKGGLWVAEADSKEQIEELLKSD
PFFIAGLRQSHEILHWCKANADRKALF

Sequences:

>Translated_107_residues
MTSQERVAPCFFAVLFTDRPYQGDVRAAHLQAHIAWLEQHKEIIPVGGLLRQEMGQTPKGGLWVAEADSKEQIEELLKSD
PFFIAGLRQSHEILHWCKANADRKALF
>Mature_106_residues
TSQERVAPCFFAVLFTDRPYQGDVRAAHLQAHIAWLEQHKEIIPVGGLLRQEMGQTPKGGLWVAEADSKEQIEELLKSDP
FFIAGLRQSHEILHWCKANADRKALF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12169; Mature: 12038

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSQERVAPCFFAVLFTDRPYQGDVRAAHLQAHIAWLEQHKEIIPVGGLLRQEMGQTPKG
CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCC
GLWVAEADSKEQIEELLKSDPFFIAGLRQSHEILHWCKANADRKALF
CEEEEECCCHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TSQERVAPCFFAVLFTDRPYQGDVRAAHLQAHIAWLEQHKEIIPVGGLLRQEMGQTPKG
CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCC
GLWVAEADSKEQIEELLKSDPFFIAGLRQSHEILHWCKANADRKALF
CEEEEECCCHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA