| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120608772
Identifier: 120608772
GI number: 120608772
Start: 66262
End: 68028
Strand: Reverse
Name: 120608772
Synonym: Aave_0061
Alternate gene names: NA
Gene position: 68028-66262 (Counterclockwise)
Preceding gene: 120608773
Following gene: 120608771
Centisome position: 1.27
GC content: 69.84
Gene sequence:
>1767_bases ATGACCAACGACGAGTCCCTTTCCTCCACCCCGCCGGCCCGGCGGACCTGGCGGCAGCGCATACCGTTCGCGCTGCTGAT GGTGTTCACCGCCGTGTACGCGCTTGCCACGGCGGTATCCGCCTGGCGCACTTTCACGCCGGTCCCCATCTGGGACATGT GGGCCGCAGCACTGGAGTTCTATATCGATGTGCACCGTGGCGTCGGCTGGGACGCCTGGTGGCGGCAGGTCAACGAGCAC CGGCTCGTGCTTCCCAAAGCGCTGTTCTGGATGGAATACACCTGGTTCGGCGGCCAGCAGGTCTTCCTGATCATCATGAA CTACGTGCTCGTCGGCTGCGGCCTGGCGGTGTTCGTGGTCTTCCTGCGGGCCCGCCTGCCCGCCATGTCCGGCAGGTCCC GCTTCTTCGGCGCGACGCTATTGGCCCTCTGGCTGTTTTCCTGGGTGCAGAAGGAAAACCTGGCCTGGGCCAACCAGGGC CAGTTCTTCCTGGCGCAGCTGCTGCCCCTGGCGGGCTTCTACTGCCTCTACCGCGCCGCATGCGCCCCCTCGGCGCGCGG ATGGTTTCCCGCGGCCTGCACGATCGGGGTTCTCAGCGTGGGAACCATGGCCAACGGCGTCATGGCACTGCCCATGATGG TGCTCTATGCCGCCGTCACGCGGCTCGGCTGGCGGCGCACGGCCATCCTGGCGGTGCTTGCCGCGGTCTGCGCAGGCGCC TATGCGGTCGGCTACACCTCTCCTTCCGACCATGGCGGCGTGTTTTCCAAGCTGCGGGACCGCCCGCTGGACATGCTCTC CTATATCCTGGTCTACCTCGGATCCCCCTTCCAGCATTTCGTGCTGAAGCAGCATTCGCCGTCGTGGACTCCGCTAAGCC AGGCCTTCGGGGTGCTTTTCGTGCTGCTCTCCCTGGCCCCGCTGCCGCGCGCCCTGCGCGATCCCCGTGCGCACCGGCTG GACCTGGCGCTGCTGACCTTCGTCGCCTACATCGGCGGTCTCGCGTTCGCGACCAGCGGGGGCCGCGTGCATTTCGGCCT CGAAAGCGCGCTGTCGAGCCGCTACACCACGCCGACCGTGATGGCATGGGCCGCCCTGGCGATCCTGTACGCGCCGCGCC TCGTCGCGCTGCGCGGCGCGGCACGCGTGGTCATGCATGTGCTGCTCATCGCCCTGCTGGCGCAAATGCTCGTGGTGCAG ATGAGCGACACGGGGCGCAAGGCCGAACAGCACATGCGCATGACCGGCGCGCTGGCACTGCAGATGGGCGTGCATGACAC GCGGCGCATCGGCATGCTGATCTGGAACGAACAGTACGGCGCACGACTTGTCCGCGGAGCCACGGCCATCGGCGCAGGCG TGTTCGGCCGCCCGGCCCTGGTGGACGCCACCCATGCGCTGGGCGAAAAGGCCGAGGCCGTGCCCGCCCGCTGCCATGCC TTCGTGGACCAGGTGGAAACCCTGCCCGGCGAGCCCCGCTTCGTGCGCGTGCAGGGCGGGCTGCTGCCCGAGCCCGGGCG CACGCCCTTCGAGGCCGTGCGCCTCGTCGGCGCCGACGGCACGGTGGTCGGCTACGGCCTGCCCGACCGCTGGCGCAAGC GCACCCCACCCGCCCATGCGCCCGGCCCGTTCGGGCGCTACCTCATGTTCACGGCCTACCTGCAGGTGCCGGCGTCGGGG CAACTGCCCCCCGCCGTCACGCTGCAGGCGCCCGGCACGCCCTGCTCGGCCGCCCTGGTGCTGGCGCCCCCCGTGCCGGC CTCCTGA
Upstream 100 bases:
>100_bases GGTGGTCTATGCCCCGGCGAAGTGGGCGCTCATCATGCTGGTGATCCGCCACCTGCCCCGCGCCGTGTTCCACCGCATGA AGATCTGACCATCGCCCCAG
Downstream 100 bases:
>100_bases CGCGACGCCGTCCTTCCACGATTTTCGATCCCGATGCATCCCCCCTCTTCCATGCAGCACACCACCAAGATCGTCCTGCC CGGCGGCGCCGGCCTCGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 588; Mature: 587
Protein sequence:
>588_residues MTNDESLSSTPPARRTWRQRIPFALLMVFTAVYALATAVSAWRTFTPVPIWDMWAAALEFYIDVHRGVGWDAWWRQVNEH RLVLPKALFWMEYTWFGGQQVFLIIMNYVLVGCGLAVFVVFLRARLPAMSGRSRFFGATLLALWLFSWVQKENLAWANQG QFFLAQLLPLAGFYCLYRAACAPSARGWFPAACTIGVLSVGTMANGVMALPMMVLYAAVTRLGWRRTAILAVLAAVCAGA YAVGYTSPSDHGGVFSKLRDRPLDMLSYILVYLGSPFQHFVLKQHSPSWTPLSQAFGVLFVLLSLAPLPRALRDPRAHRL DLALLTFVAYIGGLAFATSGGRVHFGLESALSSRYTTPTVMAWAALAILYAPRLVALRGAARVVMHVLLIALLAQMLVVQ MSDTGRKAEQHMRMTGALALQMGVHDTRRIGMLIWNEQYGARLVRGATAIGAGVFGRPALVDATHALGEKAEAVPARCHA FVDQVETLPGEPRFVRVQGGLLPEPGRTPFEAVRLVGADGTVVGYGLPDRWRKRTPPAHAPGPFGRYLMFTAYLQVPASG QLPPAVTLQAPGTPCSAALVLAPPVPAS
Sequences:
>Translated_588_residues MTNDESLSSTPPARRTWRQRIPFALLMVFTAVYALATAVSAWRTFTPVPIWDMWAAALEFYIDVHRGVGWDAWWRQVNEH RLVLPKALFWMEYTWFGGQQVFLIIMNYVLVGCGLAVFVVFLRARLPAMSGRSRFFGATLLALWLFSWVQKENLAWANQG QFFLAQLLPLAGFYCLYRAACAPSARGWFPAACTIGVLSVGTMANGVMALPMMVLYAAVTRLGWRRTAILAVLAAVCAGA YAVGYTSPSDHGGVFSKLRDRPLDMLSYILVYLGSPFQHFVLKQHSPSWTPLSQAFGVLFVLLSLAPLPRALRDPRAHRL DLALLTFVAYIGGLAFATSGGRVHFGLESALSSRYTTPTVMAWAALAILYAPRLVALRGAARVVMHVLLIALLAQMLVVQ MSDTGRKAEQHMRMTGALALQMGVHDTRRIGMLIWNEQYGARLVRGATAIGAGVFGRPALVDATHALGEKAEAVPARCHA FVDQVETLPGEPRFVRVQGGLLPEPGRTPFEAVRLVGADGTVVGYGLPDRWRKRTPPAHAPGPFGRYLMFTAYLQVPASG QLPPAVTLQAPGTPCSAALVLAPPVPAS >Mature_587_residues TNDESLSSTPPARRTWRQRIPFALLMVFTAVYALATAVSAWRTFTPVPIWDMWAAALEFYIDVHRGVGWDAWWRQVNEHR LVLPKALFWMEYTWFGGQQVFLIIMNYVLVGCGLAVFVVFLRARLPAMSGRSRFFGATLLALWLFSWVQKENLAWANQGQ FFLAQLLPLAGFYCLYRAACAPSARGWFPAACTIGVLSVGTMANGVMALPMMVLYAAVTRLGWRRTAILAVLAAVCAGAY AVGYTSPSDHGGVFSKLRDRPLDMLSYILVYLGSPFQHFVLKQHSPSWTPLSQAFGVLFVLLSLAPLPRALRDPRAHRLD LALLTFVAYIGGLAFATSGGRVHFGLESALSSRYTTPTVMAWAALAILYAPRLVALRGAARVVMHVLLIALLAQMLVVQM SDTGRKAEQHMRMTGALALQMGVHDTRRIGMLIWNEQYGARLVRGATAIGAGVFGRPALVDATHALGEKAEAVPARCHAF VDQVETLPGEPRFVRVQGGLLPEPGRTPFEAVRLVGADGTVVGYGLPDRWRKRTPPAHAPGPFGRYLMFTAYLQVPASGQ LPPAVTLQAPGTPCSAALVLAPPVPAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64245; Mature: 64114
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNDESLSSTPPARRTWRQRIPFALLMVFTAVYALATAVSAWRTFTPVPIWDMWAAALEF CCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH YIDVHRGVGWDAWWRQVNEHRLVLPKALFWMEYTWFGGQQVFLIIMNYVLVGCGLAVFVV HHHHHCCCCHHHHHHHHCCCEEHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHH FLRARLPAMSGRSRFFGATLLALWLFSWVQKENLAWANQGQFFLAQLLPLAGFYCLYRAA HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH CAPSARGWFPAACTIGVLSVGTMANGVMALPMMVLYAAVTRLGWRRTAILAVLAAVCAGA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH YAVGYTSPSDHGGVFSKLRDRPLDMLSYILVYLGSPFQHFVLKQHSPSWTPLSQAFGVLF HEECCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHH VLLSLAPLPRALRDPRAHRLDLALLTFVAYIGGLAFATSGGRVHFGLESALSSRYTTPTV HHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHEECCCCEEEECHHHHHHCCCCCHHH MAWAALAILYAPRLVALRGAARVVMHVLLIALLAQMLVVQMSDTGRKAEQHMRMTGALAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH QMGVHDTRRIGMLIWNEQYGARLVRGATAIGAGVFGRPALVDATHALGEKAEAVPARCHA HHCCCCHHHEEEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHH FVDQVETLPGEPRFVRVQGGLLPEPGRTPFEAVRLVGADGTVVGYGLPDRWRKRTPPAHA HHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHEEECCCCCEEECCCCHHHHCCCCCCCC PGPFGRYLMFTAYLQVPASGQLPPAVTLQAPGTPCSAALVLAPPVPAS CCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCEEEECCCCCCC >Mature Secondary Structure TNDESLSSTPPARRTWRQRIPFALLMVFTAVYALATAVSAWRTFTPVPIWDMWAAALEF CCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH YIDVHRGVGWDAWWRQVNEHRLVLPKALFWMEYTWFGGQQVFLIIMNYVLVGCGLAVFVV HHHHHCCCCHHHHHHHHCCCEEHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHH FLRARLPAMSGRSRFFGATLLALWLFSWVQKENLAWANQGQFFLAQLLPLAGFYCLYRAA HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH CAPSARGWFPAACTIGVLSVGTMANGVMALPMMVLYAAVTRLGWRRTAILAVLAAVCAGA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH YAVGYTSPSDHGGVFSKLRDRPLDMLSYILVYLGSPFQHFVLKQHSPSWTPLSQAFGVLF HEECCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHH VLLSLAPLPRALRDPRAHRLDLALLTFVAYIGGLAFATSGGRVHFGLESALSSRYTTPTV HHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHEECCCCEEEECHHHHHHCCCCCHHH MAWAALAILYAPRLVALRGAARVVMHVLLIALLAQMLVVQMSDTGRKAEQHMRMTGALAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH QMGVHDTRRIGMLIWNEQYGARLVRGATAIGAGVFGRPALVDATHALGEKAEAVPARCHA HHCCCCHHHEEEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHH FVDQVETLPGEPRFVRVQGGLLPEPGRTPFEAVRLVGADGTVVGYGLPDRWRKRTPPAHA HHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHEEECCCCCEEECCCCHHHHCCCCCCCC PGPFGRYLMFTAYLQVPASGQLPPAVTLQAPGTPCSAALVLAPPVPAS CCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA