Click here to switch to the map view.

The map label for this gene is 120608750

Identifier: 120608750

GI number: 120608750

Start: 40951

End: 41694

Strand: Reverse

Name: 120608750

Synonym: Aave_0037

Alternate gene names: NA

Gene position: 41694-40951 (Counterclockwise)

Preceding gene: 120608751

Following gene: 120608749

Centisome position: 0.78

GC content: 48.12

Gene sequence:

>744_bases
TTGATGATAACGCAAGACTCTATGAAGACAGGATTTGAGAGGTGGCAGGAGGGCATAGACAAAGCAGCGCAGGATGAGCG
TTGGAATTACTGGGATTGCGAGATCCAGGCGGCCGTCAATGAATACAACCAACACCTTGCCGGTATAGCAGGCTATATAC
CCCTGGATTGGTATTTCATCAAATCGATGGTTTGGGTGGAGACCGGTGCGAACAGTTCCGAATGGAAAATCAAACCGATG
CAAATCGGCGTTCCCGGAGACCCTGGAATGGCATCGCTTCTCAGTGGCAACGAAGGCGGTGATTTAATATTACCACCCCA
CTGGAAGTCCAAATTAACGCCGAATTCGATCAGAACCATACCCCAGCATAACCTTCGCGCAGGTATAGGTTATTTGCTGA
TGAGGATGGGCAACTACGAATATCGTAGCCTGCCGAGTGCAGACGGAAAACTCTATGAGGTCGTGGTCAGCCCGGGCGAC
AGTTTTGACAAGATCGCAAGAAAAAATGGCAGTACGGTGGAGACGATACGAAGGTTGAATCCACACATTTTGCTCTTGAG
ACCTGGACAGATGCTGAAATACCAGAAATCATCAGTCCAGCGAATTATCAGAAACTGGCGGATTCTGTCAACCCAAATGG
CAGCACAGAGATACAATGGCGGCGGTGATCCTAATTATGCAAGGAAACTTGACTATGTATTACCCTTGCTGCGTAAAGGA
AAGGTAGCAGTATGCGAAAAATAG

Upstream 100 bases:

>100_bases
CGTGATTTCAAGCTACTCCACGTTATCTTCGATTGCTCATACCGTGTGCCATGAATAAAAGCAAACGGCAATAGCTCACG
GCATAAGGCAAAGAGAGGTT

Downstream 100 bases:

>100_bases
TTTTCGGGACATTATTTCCAGTGAGCTTGCTTTTCGCATCATTTATTGCAACTGCATCCGCTCATGCCACCGAAGAACGT
GCTCTGCGAGAGGCGTGCAG

Product: peptidoglycan-binding LysM

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MMITQDSMKTGFERWQEGIDKAAQDERWNYWDCEIQAAVNEYNQHLAGIAGYIPLDWYFIKSMVWVETGANSSEWKIKPM
QIGVPGDPGMASLLSGNEGGDLILPPHWKSKLTPNSIRTIPQHNLRAGIGYLLMRMGNYEYRSLPSADGKLYEVVVSPGD
SFDKIARKNGSTVETIRRLNPHILLLRPGQMLKYQKSSVQRIIRNWRILSTQMAAQRYNGGGDPNYARKLDYVLPLLRKG
KVAVCEK

Sequences:

>Translated_247_residues
MMITQDSMKTGFERWQEGIDKAAQDERWNYWDCEIQAAVNEYNQHLAGIAGYIPLDWYFIKSMVWVETGANSSEWKIKPM
QIGVPGDPGMASLLSGNEGGDLILPPHWKSKLTPNSIRTIPQHNLRAGIGYLLMRMGNYEYRSLPSADGKLYEVVVSPGD
SFDKIARKNGSTVETIRRLNPHILLLRPGQMLKYQKSSVQRIIRNWRILSTQMAAQRYNGGGDPNYARKLDYVLPLLRKG
KVAVCEK
>Mature_247_residues
MMITQDSMKTGFERWQEGIDKAAQDERWNYWDCEIQAAVNEYNQHLAGIAGYIPLDWYFIKSMVWVETGANSSEWKIKPM
QIGVPGDPGMASLLSGNEGGDLILPPHWKSKLTPNSIRTIPQHNLRAGIGYLLMRMGNYEYRSLPSADGKLYEVVVSPGD
SFDKIARKNGSTVETIRRLNPHILLLRPGQMLKYQKSSVQRIIRNWRILSTQMAAQRYNGGGDPNYARKLDYVLPLLRKG
KVAVCEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28075; Mature: 28075

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMITQDSMKTGFERWQEGIDKAAQDERWNYWDCEIQAAVNEYNQHLAGIAGYIPLDWYFI
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHCCCCHHHHHH
KSMVWVETGANSSEWKIKPMQIGVPGDPGMASLLSGNEGGDLILPPHWKSKLTPNSIRTI
HHHHEEECCCCCCCEEEEEEEECCCCCCCHHHHHCCCCCCCEEECCCCCCCCCCCHHHCC
PQHNLRAGIGYLLMRMGNYEYRSLPSADGKLYEVVVSPGDSFDKIARKNGSTVETIRRLN
CCHHHHHHHHHHHHHHCCCHHHCCCCCCCCEEEEEECCCCCHHHHHHCCCCHHHHHHHCC
PHILLLRPGQMLKYQKSSVQRIIRNWRILSTQMAAQRYNGGGDPNYARKLDYVLPLLRKG
CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
KVAVCEK
CEEECCC
>Mature Secondary Structure
MMITQDSMKTGFERWQEGIDKAAQDERWNYWDCEIQAAVNEYNQHLAGIAGYIPLDWYFI
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHCCCCHHHHHH
KSMVWVETGANSSEWKIKPMQIGVPGDPGMASLLSGNEGGDLILPPHWKSKLTPNSIRTI
HHHHEEECCCCCCCEEEEEEEECCCCCCCHHHHHCCCCCCCEEECCCCCCCCCCCHHHCC
PQHNLRAGIGYLLMRMGNYEYRSLPSADGKLYEVVVSPGDSFDKIARKNGSTVETIRRLN
CCHHHHHHHHHHHHHHCCCHHHCCCCCCCCEEEEEECCCCCHHHHHHCCCCHHHHHHHCC
PHILLLRPGQMLKYQKSSVQRIIRNWRILSTQMAAQRYNGGGDPNYARKLDYVLPLLRKG
CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
KVAVCEK
CEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA