| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120608743
Identifier: 120608743
GI number: 120608743
Start: 33751
End: 34143
Strand: Reverse
Name: 120608743
Synonym: Aave_0030
Alternate gene names: NA
Gene position: 34143-33751 (Counterclockwise)
Preceding gene: 120608744
Following gene: 120608742
Centisome position: 0.64
GC content: 62.6
Gene sequence:
>393_bases ATGCCATACCTCTACCAGAATGCCGCAGCGCTCGAGGGAACCGACAAGGTCGGCAGCAAGCACTGCGTGGCGCTCCTCCA GCACTATGCCCACCTGCCGCACACCAGCAACTGGAAGCCGGGCGAAACCGTGTTCGGCAATGCCAACATCAAGAAGGGCA CGGCCATCGCCACGTTCAACAGCGCCGGCAAGTACGGCAGCCTGCCCACGGGCAACCATGCGGCGTTCTTCATCTCGCAG GATCCCGGCGGCATCTGGATCATGGACCAGTGGCTGAGCGATACGCAAAAGCCCAAGGTGTCCATGCGCTACGTGCGCCC CAAGCCCCAGCGCAAGAACGGCGACTTCGCCGACCCGAGCAACAACGCCGCAGCGTATTCCGTCATCGAATGA
Upstream 100 bases:
>100_bases GCAGCCATTTTCGAGCGCGTTTGAAACGATTGGAAACATCCACGGCAAACCGGGCGAGGCCAACTAGGATCGCCTCCTTT GCGCGACCACCACACAACCG
Downstream 100 bases:
>100_bases TGAAAGTGCACACGAAGAACGACACCGGGATCTCCATGATGCCTCCAGCTTCTGCCCTCCCCTTCACGGCCAGCCGGTCC GCGACCCTGGCCTGCCTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MPYLYQNAAALEGTDKVGSKHCVALLQHYAHLPHTSNWKPGETVFGNANIKKGTAIATFNSAGKYGSLPTGNHAAFFISQ DPGGIWIMDQWLSDTQKPKVSMRYVRPKPQRKNGDFADPSNNAAAYSVIE
Sequences:
>Translated_130_residues MPYLYQNAAALEGTDKVGSKHCVALLQHYAHLPHTSNWKPGETVFGNANIKKGTAIATFNSAGKYGSLPTGNHAAFFISQ DPGGIWIMDQWLSDTQKPKVSMRYVRPKPQRKNGDFADPSNNAAAYSVIE >Mature_129_residues PYLYQNAAALEGTDKVGSKHCVALLQHYAHLPHTSNWKPGETVFGNANIKKGTAIATFNSAGKYGSLPTGNHAAFFISQD PGGIWIMDQWLSDTQKPKVSMRYVRPKPQRKNGDFADPSNNAAAYSVIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14223; Mature: 14092
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYLYQNAAALEGTDKVGSKHCVALLQHYAHLPHTSNWKPGETVFGNANIKKGTAIATFN CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCEEEEEEC SAGKYGSLPTGNHAAFFISQDPGGIWIMDQWLSDTQKPKVSMRYVRPKPQRKNGDFADPS CCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCC NNAAAYSVIE CCCEEEEECC >Mature Secondary Structure PYLYQNAAALEGTDKVGSKHCVALLQHYAHLPHTSNWKPGETVFGNANIKKGTAIATFN CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCEEEEEEC SAGKYGSLPTGNHAAFFISQDPGGIWIMDQWLSDTQKPKVSMRYVRPKPQRKNGDFADPS CCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCC NNAAAYSVIE CCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA