| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is ppk [H]
Identifier: 120599096
GI number: 120599096
Start: 2641551
End: 2643713
Strand: Direct
Name: ppk [H]
Synonym: Sputw3181_2292
Alternate gene names: 120599096
Gene position: 2641551-2643713 (Clockwise)
Preceding gene: 120599093
Following gene: 120599097
Centisome position: 56.1
GC content: 42.53
Gene sequence:
>2163_bases GTGTCCCCGAATACCGATAAATTATCGATTGATAAAGAACTCTCCTGGTTATCATTTAATGAGCGGGTATTGCAAGAGGC TTGCGATCCTAACGTCCCCCTTGTTGAACGGGTACGTTTTTTGGGGATATTTTCCAATAATATGGATGAATTTTTCCGCG TGCGCGTTGCTGCTGTTAGGCGATCTATTTTACTTTCAGCCTTACAGGAAGGCCGCAGTAATAGTCGCCATTTAATGGCC AAAATCCAATCTAAGGTGATGGCATTACAGGAACGATTCGATAGTATTTATACGGATTTAATGCGAGAACTCGTTCGTCG TAATATTTTGTTAATCAATGAGAAACAACTCAGTGAGTTTCACAGTAATTGGCTTAAAAAACATTTTAGAGACCATTTTA AACGCCATATTGCCCCGCTGATCGTCAGTAATAACCGCGATCTGGTGAAACATATCAATGATGATTCAACCTATCTGTGT GTGTGCTTATACACCAAAGCCCGCCGTCAGTATGCCCTAGTAGAAGTGCCGACAAAAAATGTACCACGGTTTCTCGAGCT TCCCGCGGAAAAAAGTAAAGCGAAAAAGTATCTTATTTTACTCGATAACATTATCCGTCACTGCGTAGATGAACTTTTTG GCCCCTTCTTCGAATACGATGCGATTGAAGTCTATTCAATGAAACTTACCCGTGATGCTGATTTTGATATCACAGACGAG TTAGAGCAAACTCAGCTTGAAAAAATGACTAAGGGTTTAAAAAAACGTCTTACGGCTGAACCCGTGCGCTTGGTATATGA CAAAGAAATGCCCGAACATATGTTAGTCATGCTCAAAGAGAATCTAAATATCAGTTCAACCGAATGCCTAATTCCCGGTG GGCGTTACCACAGTTTTAAAGACTTTATCGGTTTTCCGAATCCTAGCCGTGATTACCTCGAAAACGAAAAACTCCCCGCG CTCAACAGCGCAGGATTTGGCCGCTGCGCCAACAGTTTTGATGCGATAAAAATGGGCGATATTATGCTCAACTACCCGTA CCATAAGTTTTCCCACTTTACCGAAATGGTGCGCCAAGCCGCTTACGATCCTGCAGTGCGTTTTATCCGCATTAATTTAT ATCGAGTGGCAAAAAAATCCCACGTGATGCAGTCACTAATCGATGCGGTTAAAAATGGCAAACAAGTTACCGCCGTGATT GAACTTAGGGCAAGGTTCGATGAGCAATCCAATATCGAGTGGACTCGTATTTTGGCCGAAGCAGGCGTAAAAGTGCACCA CGGGATCACCAGTTTAAAAGTGCATTCCAAGCTCTGTTTAATTGGTCGCGAAGAACAAGGAGAAATCAAACTCTACTGTC ACGTGGGATCTGGCAACTTTAACGAAGGCACAGCGCGGGTCTACACTGACTTATCATTGTTTACTGCAAACCAAGAAATT GCCCGTGAAGTTGAACAGGTATTTGACTTGATTGAACACCCATATCGCCGAGATAACTTCCAACATTTGATCGTGTCGCC CTACGATGCACGACAAAAGCTCACCTACTTAATCGATAAAGAAATCGTCAACGCACAGAGTCACATTAAGGCGGCTATTA CCTTAAAATTAAATAACTTACTCGATGATGCGTTAGTGCAAAAACTCTATGAAGCCTCTGCTGCAGGCGTAAAAATTAAG TTGTTAATCCGCGGAATGTGCTCGCTGATCCCGCAAATACCAGGCATCAGCGACAATATCGAGGTTTACAGTATTGTGGA TAGATTCCTCGAGCATTCCCGCGTAATGTTGTTCCATGCGGGGGGCGAAAATAAGCTCTTTATCTGCTCGGCCGACTGGA TGAGCCGTAATATTGATAACCGTGTTGAAGTCAGTGTACCTATTTATGATCTGCGCCTAAAACAAATGGTGATGGATATT TTATCTTTACAGTTTAATGACAACACTAAGGCCCGAATAATCAATAAGGAACAAAGTAATCCTTATCGAAACCGTGGCAA TAAACGTAAAGTGCGTTCTCAAATTGCCATTTATCAATATCTGATTAATTATGAGAAGCGACAACAACAGGAATTTAACG CCCAGATGGAAGCATCACAAGCGACTTCCTCCGGGGAGTTTACCCTAGAGAAAAAACCAGAATTACAGGCCAAAGCCAGT TAA
Upstream 100 bases:
>100_bases ATTGAAATTCCTTCACTTGTCAGCCGTAAATCTGATTGCACAACGGTGGATGAATGCTATTGTATAGTGCGCCATGACGC TTGCTTAAAGGAGCTGTGCA
Downstream 100 bases:
>100_bases TCACTGGCTTTATTATCATCTCGATTGCCTAAGGATAATCCGATTGGTTGCCACACATTCACAACCGCGACACTTTGTCG CCATCGACATGGGATCAAAT
Product: polyphosphate kinase
Products: NA
Alternate protein names: ATP-polyphosphate phosphotransferase; Polyphosphoric acid kinase [H]
Number of amino acids: Translated: 720; Mature: 719
Protein sequence:
>720_residues MSPNTDKLSIDKELSWLSFNERVLQEACDPNVPLVERVRFLGIFSNNMDEFFRVRVAAVRRSILLSALQEGRSNSRHLMA KIQSKVMALQERFDSIYTDLMRELVRRNILLINEKQLSEFHSNWLKKHFRDHFKRHIAPLIVSNNRDLVKHINDDSTYLC VCLYTKARRQYALVEVPTKNVPRFLELPAEKSKAKKYLILLDNIIRHCVDELFGPFFEYDAIEVYSMKLTRDADFDITDE LEQTQLEKMTKGLKKRLTAEPVRLVYDKEMPEHMLVMLKENLNISSTECLIPGGRYHSFKDFIGFPNPSRDYLENEKLPA LNSAGFGRCANSFDAIKMGDIMLNYPYHKFSHFTEMVRQAAYDPAVRFIRINLYRVAKKSHVMQSLIDAVKNGKQVTAVI ELRARFDEQSNIEWTRILAEAGVKVHHGITSLKVHSKLCLIGREEQGEIKLYCHVGSGNFNEGTARVYTDLSLFTANQEI AREVEQVFDLIEHPYRRDNFQHLIVSPYDARQKLTYLIDKEIVNAQSHIKAAITLKLNNLLDDALVQKLYEASAAGVKIK LLIRGMCSLIPQIPGISDNIEVYSIVDRFLEHSRVMLFHAGGENKLFICSADWMSRNIDNRVEVSVPIYDLRLKQMVMDI LSLQFNDNTKARIINKEQSNPYRNRGNKRKVRSQIAIYQYLINYEKRQQQEFNAQMEASQATSSGEFTLEKKPELQAKAS
Sequences:
>Translated_720_residues MSPNTDKLSIDKELSWLSFNERVLQEACDPNVPLVERVRFLGIFSNNMDEFFRVRVAAVRRSILLSALQEGRSNSRHLMA KIQSKVMALQERFDSIYTDLMRELVRRNILLINEKQLSEFHSNWLKKHFRDHFKRHIAPLIVSNNRDLVKHINDDSTYLC VCLYTKARRQYALVEVPTKNVPRFLELPAEKSKAKKYLILLDNIIRHCVDELFGPFFEYDAIEVYSMKLTRDADFDITDE LEQTQLEKMTKGLKKRLTAEPVRLVYDKEMPEHMLVMLKENLNISSTECLIPGGRYHSFKDFIGFPNPSRDYLENEKLPA LNSAGFGRCANSFDAIKMGDIMLNYPYHKFSHFTEMVRQAAYDPAVRFIRINLYRVAKKSHVMQSLIDAVKNGKQVTAVI ELRARFDEQSNIEWTRILAEAGVKVHHGITSLKVHSKLCLIGREEQGEIKLYCHVGSGNFNEGTARVYTDLSLFTANQEI AREVEQVFDLIEHPYRRDNFQHLIVSPYDARQKLTYLIDKEIVNAQSHIKAAITLKLNNLLDDALVQKLYEASAAGVKIK LLIRGMCSLIPQIPGISDNIEVYSIVDRFLEHSRVMLFHAGGENKLFICSADWMSRNIDNRVEVSVPIYDLRLKQMVMDI LSLQFNDNTKARIINKEQSNPYRNRGNKRKVRSQIAIYQYLINYEKRQQQEFNAQMEASQATSSGEFTLEKKPELQAKAS >Mature_719_residues SPNTDKLSIDKELSWLSFNERVLQEACDPNVPLVERVRFLGIFSNNMDEFFRVRVAAVRRSILLSALQEGRSNSRHLMAK IQSKVMALQERFDSIYTDLMRELVRRNILLINEKQLSEFHSNWLKKHFRDHFKRHIAPLIVSNNRDLVKHINDDSTYLCV CLYTKARRQYALVEVPTKNVPRFLELPAEKSKAKKYLILLDNIIRHCVDELFGPFFEYDAIEVYSMKLTRDADFDITDEL EQTQLEKMTKGLKKRLTAEPVRLVYDKEMPEHMLVMLKENLNISSTECLIPGGRYHSFKDFIGFPNPSRDYLENEKLPAL NSAGFGRCANSFDAIKMGDIMLNYPYHKFSHFTEMVRQAAYDPAVRFIRINLYRVAKKSHVMQSLIDAVKNGKQVTAVIE LRARFDEQSNIEWTRILAEAGVKVHHGITSLKVHSKLCLIGREEQGEIKLYCHVGSGNFNEGTARVYTDLSLFTANQEIA REVEQVFDLIEHPYRRDNFQHLIVSPYDARQKLTYLIDKEIVNAQSHIKAAITLKLNNLLDDALVQKLYEASAAGVKIKL LIRGMCSLIPQIPGISDNIEVYSIVDRFLEHSRVMLFHAGGENKLFICSADWMSRNIDNRVEVSVPIYDLRLKQMVMDIL SLQFNDNTKARIINKEQSNPYRNRGNKRKVRSQIAIYQYLINYEKRQQQEFNAQMEASQATSSGEFTLEKKPELQAKAS
Specific function: Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) [H]
COG id: COG0855
COG function: function code P; Polyphosphate kinase
Gene ontology:
Cell location: Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PLD phosphodiesterase domain [H]
Homologues:
Organism=Escherichia coli, GI1788847, Length=683, Percent_Identity=52.7086383601757, Blast_Score=769, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001736 - InterPro: IPR003414 [H]
Pfam domain/function: PF02503 PP_kinase [H]
EC number: =2.7.4.1 [H]
Molecular weight: Translated: 83419; Mature: 83288
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPNTDKLSIDKELSWLSFNERVLQEACDPNVPLVERVRFLGIFSNNMDEFFRVRVAAVR CCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH RSILLSALQEGRSNSRHLMAKIQSKVMALQERFDSIYTDLMRELVRRNILLINEKQLSEF HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHH HSNWLKKHFRDHFKRHIAPLIVSNNRDLVKHINDDSTYLCVCLYTKARRQYALVEVPTKN HHHHHHHHHHHHHHHHCCCEEECCCCHHHHHCCCCCCEEEEEEEHHHCCCEEEEECCCCC VPRFLELPAEKSKAKKYLILLDNIIRHCVDELFGPFFEYDAIEVYSMKLTRDADFDITDE CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCEEEEEEEEECCCCCCCHHH LEQTQLEKMTKGLKKRLTAEPVRLVYDKEMPEHMLVMLKENLNISSTECLIPGGRYHSFK HHHHHHHHHHHHHHHHCCCCCHHHEECCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCHH DFIGFPNPSRDYLENEKLPALNSAGFGRCANSFDAIKMGDIMLNYPYHKFSHFTEMVRQA HHCCCCCCCHHHHCCCCCCCCCCCCCCHHCCCCCCEEECCEEEECCHHHHHHHHHHHHHH AYDPAVRFIRINLYRVAKKSHVMQSLIDAVKNGKQVTAVIELRARFDEQSNIEWTRILAE CCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEHEEHHHHCCCCCCCHHHHHHHH AGVKVHHGITSLKVHSKLCLIGREEQGEIKLYCHVGSGNFNEGTARVYTDLSLFTANQEI CCCEEECCCHHEEECCEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEEHHHEECCHHH AREVEQVFDLIEHPYRRDNFQHLIVSPYDARQKLTYLIDKEIVNAQSHIKAAITLKLNNL HHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCHHHHCEEEEEEEHHHH LDDALVQKLYEASAAGVKIKLLIRGMCSLIPQIPGISDNIEVYSIVDRFLEHSRVMLFHA HHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEEEE GGENKLFICSADWMSRNIDNRVEVSVPIYDLRLKQMVMDILSLQFNDNTKARIINKEQSN CCCCEEEEEECHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC PYRNRGNKRKVRSQIAIYQYLINYEKRQQQEFNAQMEASQATSSGEFTLEKKPELQAKAS CHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCC >Mature Secondary Structure SPNTDKLSIDKELSWLSFNERVLQEACDPNVPLVERVRFLGIFSNNMDEFFRVRVAAVR CCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH RSILLSALQEGRSNSRHLMAKIQSKVMALQERFDSIYTDLMRELVRRNILLINEKQLSEF HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHH HSNWLKKHFRDHFKRHIAPLIVSNNRDLVKHINDDSTYLCVCLYTKARRQYALVEVPTKN HHHHHHHHHHHHHHHHCCCEEECCCCHHHHHCCCCCCEEEEEEEHHHCCCEEEEECCCCC VPRFLELPAEKSKAKKYLILLDNIIRHCVDELFGPFFEYDAIEVYSMKLTRDADFDITDE CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCEEEEEEEEECCCCCCCHHH LEQTQLEKMTKGLKKRLTAEPVRLVYDKEMPEHMLVMLKENLNISSTECLIPGGRYHSFK HHHHHHHHHHHHHHHHCCCCCHHHEECCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCHH DFIGFPNPSRDYLENEKLPALNSAGFGRCANSFDAIKMGDIMLNYPYHKFSHFTEMVRQA HHCCCCCCCHHHHCCCCCCCCCCCCCCHHCCCCCCEEECCEEEECCHHHHHHHHHHHHHH AYDPAVRFIRINLYRVAKKSHVMQSLIDAVKNGKQVTAVIELRARFDEQSNIEWTRILAE CCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEHEEHHHHCCCCCCCHHHHHHHH AGVKVHHGITSLKVHSKLCLIGREEQGEIKLYCHVGSGNFNEGTARVYTDLSLFTANQEI CCCEEECCCHHEEECCEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEEHHHEECCHHH AREVEQVFDLIEHPYRRDNFQHLIVSPYDARQKLTYLIDKEIVNAQSHIKAAITLKLNNL HHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCHHHHCEEEEEEEHHHH LDDALVQKLYEASAAGVKIKLLIRGMCSLIPQIPGISDNIEVYSIVDRFLEHSRVMLFHA HHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEEEE GGENKLFICSADWMSRNIDNRVEVSVPIYDLRLKQMVMDILSLQFNDNTKARIINKEQSN CCCCEEEEEECHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC PYRNRGNKRKVRSQIAIYQYLINYEKRQQQEFNAQMEASQATSSGEFTLEKKPELQAKAS CHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12620739 [H]