| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is gloB [H]
Identifier: 120599053
GI number: 120599053
Start: 2596298
End: 2597101
Strand: Direct
Name: gloB [H]
Synonym: Sputw3181_2249
Alternate gene names: 120599053
Gene position: 2596298-2597101 (Clockwise)
Preceding gene: 120599050
Following gene: 120599054
Centisome position: 55.14
GC content: 42.79
Gene sequence:
>804_bases ATGCTCACTATAACAGCGATTAAAGCCTTTAATGACAATTATATCTGGGTGTTACAACAAACTCCCCACTCGCAGGTTTA TGTTGTCGATCCTGGTGATGCTAAGGTCGTTATTGCCTATCTGGTCTCCCATCAGTTAGCACTCGCTGGTATTTTGCTCA CGCACCATCACCAAGATCATACTGGCGGTGTCGGGGAACTTAAACGTTACGTTGAGCAAACTTCATCACAAACACTGCAG GTTTACGGACCACAAAAAGAAAATATTGCTCATGTCAATGTACCACTTAATCCTGAAATGCGAACTGAACTCACCCTTCC TTTCCTTAACGCTCAAATACAAGTGCTGAACGTGCCAGGCCATACAGCTGGACATATTGCCTATGTCATTGAGGATGCGC TTTTTTGTGGTGATACTTTATTCAGTGCAGGCTGTGGTCGACTATTTGAAGGCACCGCGGAGCAAATGCTTAGCTCTCTT ACACTATTAGCCAAACTTCCTGCGAATACTCGAGTTTTCTGCGCCCATGAATATACCCTCTCCAATCTTAAATTTGCTCT AACAGTCGAGCCTAACAATCTAAATTTACAGGCATATATGCAAAAAGCCACAGAAATGCGTGCTCAAAATAGCGCTACAA TTCCCTCAAGTATTGCCTTGGAGCGAGCTATCAATCCTTTTTTGCGCGTGGGAGAACAAAGCATTATTGATAGTATAAAA CAGCATTTTGATGATCCCGATCCTATCAAACTAGATGAACTCACTTGTTTTACCCGCCTTCGGCAGTGGAAAGATATTTT TTAG
Upstream 100 bases:
>100_bases GTACAGAACACTATGCCATTATGGCAAAAGTCGCCAAGGTGTATCGACTTGTGGATAATAACCTTATCTATAAATTGAAA TACAGCCATAAGGTGGTTCT
Downstream 100 bases:
>100_bases CACCAACCGATCGTTTTTAGATTGAAATTTATACAGTTTTTTCCACTTTTGATGATGTAAGTCAAAAATAGCCTTACAAG ATGTACGATAATTAAGGGAC
Product: hydroxyacylglutathione hydrolase
Products: NA
Alternate protein names: Glyoxalase II; Glx II [H]
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MLTITAIKAFNDNYIWVLQQTPHSQVYVVDPGDAKVVIAYLVSHQLALAGILLTHHHQDHTGGVGELKRYVEQTSSQTLQ VYGPQKENIAHVNVPLNPEMRTELTLPFLNAQIQVLNVPGHTAGHIAYVIEDALFCGDTLFSAGCGRLFEGTAEQMLSSL TLLAKLPANTRVFCAHEYTLSNLKFALTVEPNNLNLQAYMQKATEMRAQNSATIPSSIALERAINPFLRVGEQSIIDSIK QHFDDPDPIKLDELTCFTRLRQWKDIF
Sequences:
>Translated_267_residues MLTITAIKAFNDNYIWVLQQTPHSQVYVVDPGDAKVVIAYLVSHQLALAGILLTHHHQDHTGGVGELKRYVEQTSSQTLQ VYGPQKENIAHVNVPLNPEMRTELTLPFLNAQIQVLNVPGHTAGHIAYVIEDALFCGDTLFSAGCGRLFEGTAEQMLSSL TLLAKLPANTRVFCAHEYTLSNLKFALTVEPNNLNLQAYMQKATEMRAQNSATIPSSIALERAINPFLRVGEQSIIDSIK QHFDDPDPIKLDELTCFTRLRQWKDIF >Mature_267_residues MLTITAIKAFNDNYIWVLQQTPHSQVYVVDPGDAKVVIAYLVSHQLALAGILLTHHHQDHTGGVGELKRYVEQTSSQTLQ VYGPQKENIAHVNVPLNPEMRTELTLPFLNAQIQVLNVPGHTAGHIAYVIEDALFCGDTLFSAGCGRLFEGTAEQMLSSL TLLAKLPANTRVFCAHEYTLSNLKFALTVEPNNLNLQAYMQKATEMRAQNSATIPSSIALERAINPFLRVGEQSIIDSIK QHFDDPDPIKLDELTCFTRLRQWKDIF
Specific function: Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid [H]
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]
Homologues:
Organism=Homo sapiens, GI94538322, Length=274, Percent_Identity=34.6715328467153, Blast_Score=162, Evalue=3e-40, Organism=Homo sapiens, GI94538320, Length=274, Percent_Identity=34.6715328467153, Blast_Score=162, Evalue=3e-40, Organism=Homo sapiens, GI116642887, Length=275, Percent_Identity=33.8181818181818, Blast_Score=149, Evalue=3e-36, Organism=Homo sapiens, GI21703352, Length=236, Percent_Identity=36.4406779661017, Blast_Score=149, Evalue=3e-36, Organism=Homo sapiens, GI14150041, Length=241, Percent_Identity=36.0995850622407, Blast_Score=145, Evalue=3e-35, Organism=Homo sapiens, GI46361987, Length=209, Percent_Identity=35.8851674641148, Blast_Score=119, Evalue=3e-27, Organism=Escherichia coli, GI1786406, Length=242, Percent_Identity=45.0413223140496, Blast_Score=187, Evalue=9e-49, Organism=Escherichia coli, GI1787158, Length=205, Percent_Identity=29.7560975609756, Blast_Score=68, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17536925, Length=282, Percent_Identity=31.9148936170213, Blast_Score=134, Evalue=7e-32, Organism=Saccharomyces cerevisiae, GI6320478, Length=238, Percent_Identity=28.9915966386555, Blast_Score=106, Evalue=5e-24, Organism=Saccharomyces cerevisiae, GI6324614, Length=240, Percent_Identity=27.0833333333333, Blast_Score=89, Evalue=9e-19, Organism=Drosophila melanogaster, GI21356335, Length=274, Percent_Identity=38.3211678832117, Blast_Score=178, Evalue=4e-45, Organism=Drosophila melanogaster, GI24667711, Length=274, Percent_Identity=38.3211678832117, Blast_Score=177, Evalue=5e-45, Organism=Drosophila melanogaster, GI24667703, Length=274, Percent_Identity=38.3211678832117, Blast_Score=177, Evalue=6e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR017782 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.1.2.6 [H]
Molecular weight: Translated: 29794; Mature: 29794
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTITAIKAFNDNYIWVLQQTPHSQVYVVDPGDAKVVIAYLVSHQLALAGILLTHHHQDH CEEEEEEEEECCCEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC TGGVGELKRYVEQTSSQTLQVYGPQKENIAHVNVPLNPEMRTELTLPFLNAQIQVLNVPG CCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCCCCEEEEEEEECCEEEEEECCC HTAGHIAYVIEDALFCGDTLFSAGCGRLFEGTAEQMLSSLTLLAKLPANTRVFCAHEYTL CCCCHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEE SNLKFALTVEPNNLNLQAYMQKATEMRAQNSATIPSSIALERAINPFLRVGEQSIIDSIK CCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH QHFDDPDPIKLDELTCFTRLRQWKDIF HHCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLTITAIKAFNDNYIWVLQQTPHSQVYVVDPGDAKVVIAYLVSHQLALAGILLTHHHQDH CEEEEEEEEECCCEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC TGGVGELKRYVEQTSSQTLQVYGPQKENIAHVNVPLNPEMRTELTLPFLNAQIQVLNVPG CCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCCCCEEEEEEEECCEEEEEECCC HTAGHIAYVIEDALFCGDTLFSAGCGRLFEGTAEQMLSSLTLLAKLPANTRVFCAHEYTL CCCCHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEE SNLKFALTVEPNNLNLQAYMQKATEMRAQNSATIPSSIALERAINPFLRVGEQSIIDSIK CCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH QHFDDPDPIKLDELTCFTRLRQWKDIF HHCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA