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The map label for this gene is ybiT [H]

Identifier: 120598978

GI number: 120598978

Start: 2501142

End: 2502752

Strand: Direct

Name: ybiT [H]

Synonym: Sputw3181_2170

Alternate gene names: 120598978

Gene position: 2501142-2502752 (Clockwise)

Preceding gene: 120598976

Following gene: 120598980

Centisome position: 53.12

GC content: 45.25

Gene sequence:

>1611_bases
TTGATCTCTACCGCAAATATCACAATGCAATTCGGCCCCGAGCCTTTATTTGAAAATATCTCGGCAAAATTTGGTAACGG
CAACCGCTACGGTCTGATCGGCGCTAACGGCTGCGGCAAATCAACCTTTATGAAAATCTTAAGTGGTGCACTCGCCCCAA
CCTCAGGCAATGTGTCCATCACACCGGGATTAAAGGTCGGTACCTTAAGCCAAGATCAATTTGCCTTTGAGCAATACACT
GTTATCGATGCGGTGATCATGGGTGATGTTCAGCTTTGGAAAGTCAAACAAGAACGTGACGCAATTTATGCCAAAGCCGA
CATGACCGAAGAAGATGGTATGCGCGTTGGCGATCTTGAAAGTGAATTTGCCGAAATGGATGGCTATAGCGCCGAAAGTC
GGGCGGGCGAAATCCTGATCGAAGCGGGTATTGAAGAATCCTTCCATTACGGCCCAATGTCCCAAGTCGCTCCAGGTTGG
AAATTGCGGGTGTTATTAGCCCAAGCCCTATTTGCTAACCCCGATATTTTGCTGCTCGACGAACCGACCAACAACTTGGA
TATTCATACCATTAGTTGGCTTGAAACCGAGCTGAACAAACGCAAATGCACCATGATTATCATCTCCCATGATAGGCATT
TTTTAAATGCCGTTTGTACCCATATGGCGGATATTGATTATGGCGAACTGCGCATTTATCCCGGCAACTATGAATACTTT
TTAGCCCAATCTTCCCTGCTACGTGAACAGCTATTGGCGGGTAACGCTAAAAAGAGTGCTGAGATTGAAGAATTACAGGA
CTTCGTAAACCGTTTTGGTGCTAACGCCTCTAAGGCCAAACAAGCCAGTTCTCGAGCCAAACGCATGGATAAAATTAAAC
TCGATGAAGTGAAATCATCGAGCCGCATTACGCCTTCCATTCGCTTTGCTGCCGGTAAAAAAATGCACCGCCAAGCCTTA
GTGCTGGAAAATCTCGGCCACGGTTTTGACGGTGAACTCCTCTTCCAAGGCGGCGATTTAATTCTCGAAGCGGGCGCTAA
GCTAGCGATAATCGGCGAAAACGGTGTTGGTAAAACCACCCTACTGCGCTGTTTAGTCAATGAGTTAATCCACAATGAAG
GCACGATTAAATGGTCCGAAAATGCCTCTATCGGTTATTGCCCACAGGACAGCACCTCAGATTTTGATAACGATCTCACC
ATCATGGAATGGATGGATCAATGGCGCCAACCTAAGCATAACGATTTGATGGTACGCGCCATGCTTGGACGCCTACTGTT
TACCGAAGATGATGCCAATAAAAAAGCGAAAAACTGCTCAGGCGGTGAGAAAAACCGTTTAATCTTCGGCAAATTAATGA
TGCAAGACATTAACGTCATCATCATGGATGAACCCACCAACCATATGGATATGGAAGCCATTGAAGCCTTAAATAATGCA
CTCAAAGACTTTGAAGGCACCTTAATTTTTGTTAGTCATGATCGTGAGTTTGTCTCATCGCTTGCAACCCGCATTATTGA
TATTAAAGATAAAAAACTGATTAACTTCCAAGGCACCTTCGATGAATATCTTTCAAGCCAAGCTGACATTATGGCAAGAC
AGCGCGCTTAA

Upstream 100 bases:

>100_bases
CCTTATTATGTTGGCTTTGCGCTTAGTCATCTTGTTGCCTTAAGTCTGCTCATTGGTCTACAGCCCTTTACCTTTATTAC
ACAAATTAGGAACGCTCCTT

Downstream 100 bases:

>100_bases
TATGGCGCGACTCACTCATATCGATTAACGCTGGGTTAGCACATTAAAAAGCCGTCATTGGATAACCAATGACGGCTTTC
TTATTAATACAGCCCGTTAT

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 536; Mature: 536

Protein sequence:

>536_residues
MISTANITMQFGPEPLFENISAKFGNGNRYGLIGANGCGKSTFMKILSGALAPTSGNVSITPGLKVGTLSQDQFAFEQYT
VIDAVIMGDVQLWKVKQERDAIYAKADMTEEDGMRVGDLESEFAEMDGYSAESRAGEILIEAGIEESFHYGPMSQVAPGW
KLRVLLAQALFANPDILLLDEPTNNLDIHTISWLETELNKRKCTMIIISHDRHFLNAVCTHMADIDYGELRIYPGNYEYF
LAQSSLLREQLLAGNAKKSAEIEELQDFVNRFGANASKAKQASSRAKRMDKIKLDEVKSSSRITPSIRFAAGKKMHRQAL
VLENLGHGFDGELLFQGGDLILEAGAKLAIIGENGVGKTTLLRCLVNELIHNEGTIKWSENASIGYCPQDSTSDFDNDLT
IMEWMDQWRQPKHNDLMVRAMLGRLLFTEDDANKKAKNCSGGEKNRLIFGKLMMQDINVIIMDEPTNHMDMEAIEALNNA
LKDFEGTLIFVSHDREFVSSLATRIIDIKDKKLINFQGTFDEYLSSQADIMARQRA

Sequences:

>Translated_536_residues
MISTANITMQFGPEPLFENISAKFGNGNRYGLIGANGCGKSTFMKILSGALAPTSGNVSITPGLKVGTLSQDQFAFEQYT
VIDAVIMGDVQLWKVKQERDAIYAKADMTEEDGMRVGDLESEFAEMDGYSAESRAGEILIEAGIEESFHYGPMSQVAPGW
KLRVLLAQALFANPDILLLDEPTNNLDIHTISWLETELNKRKCTMIIISHDRHFLNAVCTHMADIDYGELRIYPGNYEYF
LAQSSLLREQLLAGNAKKSAEIEELQDFVNRFGANASKAKQASSRAKRMDKIKLDEVKSSSRITPSIRFAAGKKMHRQAL
VLENLGHGFDGELLFQGGDLILEAGAKLAIIGENGVGKTTLLRCLVNELIHNEGTIKWSENASIGYCPQDSTSDFDNDLT
IMEWMDQWRQPKHNDLMVRAMLGRLLFTEDDANKKAKNCSGGEKNRLIFGKLMMQDINVIIMDEPTNHMDMEAIEALNNA
LKDFEGTLIFVSHDREFVSSLATRIIDIKDKKLINFQGTFDEYLSSQADIMARQRA
>Mature_536_residues
MISTANITMQFGPEPLFENISAKFGNGNRYGLIGANGCGKSTFMKILSGALAPTSGNVSITPGLKVGTLSQDQFAFEQYT
VIDAVIMGDVQLWKVKQERDAIYAKADMTEEDGMRVGDLESEFAEMDGYSAESRAGEILIEAGIEESFHYGPMSQVAPGW
KLRVLLAQALFANPDILLLDEPTNNLDIHTISWLETELNKRKCTMIIISHDRHFLNAVCTHMADIDYGELRIYPGNYEYF
LAQSSLLREQLLAGNAKKSAEIEELQDFVNRFGANASKAKQASSRAKRMDKIKLDEVKSSSRITPSIRFAAGKKMHRQAL
VLENLGHGFDGELLFQGGDLILEAGAKLAIIGENGVGKTTLLRCLVNELIHNEGTIKWSENASIGYCPQDSTSDFDNDLT
IMEWMDQWRQPKHNDLMVRAMLGRLLFTEDDANKKAKNCSGGEKNRLIFGKLMMQDINVIIMDEPTNHMDMEAIEALNNA
LKDFEGTLIFVSHDREFVSSLATRIIDIKDKKLINFQGTFDEYLSSQADIMARQRA

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=533, Percent_Identity=30.3939962476548, Blast_Score=252, Evalue=6e-67,
Organism=Homo sapiens, GI27881506, Length=534, Percent_Identity=28.8389513108614, Blast_Score=229, Evalue=4e-60,
Organism=Homo sapiens, GI10947137, Length=534, Percent_Identity=28.8389513108614, Blast_Score=229, Evalue=4e-60,
Organism=Homo sapiens, GI69354671, Length=528, Percent_Identity=27.8409090909091, Blast_Score=202, Evalue=8e-52,
Organism=Homo sapiens, GI10947135, Length=528, Percent_Identity=27.8409090909091, Blast_Score=202, Evalue=9e-52,
Organism=Escherichia coli, GI1787041, Length=528, Percent_Identity=64.9621212121212, Blast_Score=729, Evalue=0.0,
Organism=Escherichia coli, GI1789751, Length=537, Percent_Identity=30.3538175046555, Blast_Score=273, Evalue=2e-74,
Organism=Escherichia coli, GI2367384, Length=521, Percent_Identity=30.9021113243762, Blast_Score=227, Evalue=2e-60,
Organism=Escherichia coli, GI1787182, Length=510, Percent_Identity=30.5882352941176, Blast_Score=222, Evalue=5e-59,
Organism=Escherichia coli, GI1787029, Length=247, Percent_Identity=26.7206477732794, Blast_Score=88, Evalue=2e-18,
Organism=Escherichia coli, GI1786398, Length=248, Percent_Identity=28.6290322580645, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI1788165, Length=185, Percent_Identity=27.5675675675676, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI1787105, Length=236, Percent_Identity=27.1186440677966, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1789032, Length=192, Percent_Identity=30.2083333333333, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI1790525, Length=233, Percent_Identity=23.175965665236, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1788450, Length=240, Percent_Identity=24.5833333333333, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1787370, Length=233, Percent_Identity=23.175965665236, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17555318, Length=541, Percent_Identity=30.6839186691312, Blast_Score=247, Evalue=1e-65,
Organism=Caenorhabditis elegans, GI17553372, Length=536, Percent_Identity=30.7835820895522, Blast_Score=236, Evalue=3e-62,
Organism=Caenorhabditis elegans, GI17559834, Length=529, Percent_Identity=26.2759924385633, Blast_Score=222, Evalue=4e-58,
Organism=Saccharomyces cerevisiae, GI6320874, Length=537, Percent_Identity=29.2364990689013, Blast_Score=245, Evalue=1e-65,
Organism=Saccharomyces cerevisiae, GI6321121, Length=531, Percent_Identity=29.1902071563089, Blast_Score=229, Evalue=8e-61,
Organism=Saccharomyces cerevisiae, GI6323278, Length=413, Percent_Identity=25.90799031477, Blast_Score=134, Evalue=3e-32,
Organism=Saccharomyces cerevisiae, GI6324314, Length=413, Percent_Identity=25.6658595641646, Blast_Score=125, Evalue=2e-29,
Organism=Saccharomyces cerevisiae, GI6325030, Length=416, Percent_Identity=24.5192307692308, Blast_Score=108, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24666836, Length=530, Percent_Identity=29.622641509434, Blast_Score=250, Evalue=1e-66,
Organism=Drosophila melanogaster, GI24642252, Length=531, Percent_Identity=29.5668549905838, Blast_Score=245, Evalue=7e-65,
Organism=Drosophila melanogaster, GI18859989, Length=531, Percent_Identity=29.5668549905838, Blast_Score=245, Evalue=7e-65,
Organism=Drosophila melanogaster, GI24641342, Length=537, Percent_Identity=29.9813780260708, Blast_Score=236, Evalue=4e-62,
Organism=Drosophila melanogaster, GI116007184, Length=185, Percent_Identity=27.027027027027, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI221500365, Length=185, Percent_Identity=27.027027027027, Blast_Score=68, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 59769; Mature: 59769

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISTANITMQFGPEPLFENISAKFGNGNRYGLIGANGCGKSTFMKILSGALAPTSGNVSI
CCCEEEEEEEECCCHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCEEE
TPGLKVGTLSQDQFAFEQYTVIDAVIMGDVQLWKVKQERDAIYAKADMTEEDGMRVGDLE
CCCCEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEEHHHCCEEEECCCCHHCCCEECCHH
SEFAEMDGYSAESRAGEILIEAGIEESFHYGPMSQVAPGWKLRVLLAQALFANPDILLLD
HHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCEEEEE
EPTNNLDIHTISWLETELNKRKCTMIIISHDRHFLNAVCTHMADIDYGELRIYPGNYEYF
CCCCCCEEEEEHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHCCCCCCEEEEECCCCEEE
LAQSSLLREQLLAGNAKKSAEIEELQDFVNRFGANASKAKQASSRAKRMDKIKLDEVKSS
EHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHCCC
SRITPSIRFAAGKKMHRQALVLENLGHGFDGELLFQGGDLILEAGAKLAIIGENGVGKTT
CCCCCCEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCEEEECCCEEEEEECCCCCHHH
LLRCLVNELIHNEGTIKWSENASIGYCPQDSTSDFDNDLTIMEWMDQWRQPKHNDLMVRA
HHHHHHHHHHCCCCCEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHH
MLGRLLFTEDDANKKAKNCSGGEKNRLIFGKLMMQDINVIIMDEPTNHMDMEAIEALNNA
HHHHHEECCCCCCCHHCCCCCCCCCCEEEHEEHHCCCCEEEEECCCCCCCHHHHHHHHHH
LKDFEGTLIFVSHDREFVSSLATRIIDIKDKKLINFQGTFDEYLSSQADIMARQRA
HHHCCCEEEEEECCHHHHHHHHHHHEECCCCEEEEECCCHHHHHCCHHHHHHHCCC
>Mature Secondary Structure
MISTANITMQFGPEPLFENISAKFGNGNRYGLIGANGCGKSTFMKILSGALAPTSGNVSI
CCCEEEEEEEECCCHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCEEE
TPGLKVGTLSQDQFAFEQYTVIDAVIMGDVQLWKVKQERDAIYAKADMTEEDGMRVGDLE
CCCCEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEEHHHCCEEEECCCCHHCCCEECCHH
SEFAEMDGYSAESRAGEILIEAGIEESFHYGPMSQVAPGWKLRVLLAQALFANPDILLLD
HHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCEEEEE
EPTNNLDIHTISWLETELNKRKCTMIIISHDRHFLNAVCTHMADIDYGELRIYPGNYEYF
CCCCCCEEEEEHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHCCCCCCEEEEECCCCEEE
LAQSSLLREQLLAGNAKKSAEIEELQDFVNRFGANASKAKQASSRAKRMDKIKLDEVKSS
EHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHCCC
SRITPSIRFAAGKKMHRQALVLENLGHGFDGELLFQGGDLILEAGAKLAIIGENGVGKTT
CCCCCCEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCEEEECCCEEEEEECCCCCHHH
LLRCLVNELIHNEGTIKWSENASIGYCPQDSTSDFDNDLTIMEWMDQWRQPKHNDLMVRA
HHHHHHHHHHCCCCCEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHH
MLGRLLFTEDDANKKAKNCSGGEKNRLIFGKLMMQDINVIIMDEPTNHMDMEAIEALNNA
HHHHHEECCCCCCCHHCCCCCCCCCCEEEHEEHHCCCCEEEEECCCCCCCHHHHHHHHHH
LKDFEGTLIFVSHDREFVSSLATRIIDIKDKKLINFQGTFDEYLSSQADIMARQRA
HHHCCCEEEEEECCHHHHHHHHHHHEECCCCEEEEECCCHHHHHCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]