Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120598862

Identifier: 120598862

GI number: 120598862

Start: 2363281

End: 2363973

Strand: Direct

Name: 120598862

Synonym: Sputw3181_2053

Alternate gene names: NA

Gene position: 2363281-2363973 (Clockwise)

Preceding gene: 120598861

Following gene: 120598863

Centisome position: 50.19

GC content: 46.18

Gene sequence:

>693_bases
GTGATCGAGTACAATGTCACCGGTGCCTTTCTGGTTGGATTAATGGGCGCAGCACATTGCTTTGGTATGTGTGGTGGTCT
TGTGGGGGCTTTCTCAGCCCAAATCCCCCATCCAAAGACGGGGAATTTACTGACGCATCAACTCAAGTATTTACTAAGTT
ACAATGTAGGTCGTATTTTGAGTTATACCTTAGCAGGTTGCTTGGTTGGTGCATCGTCGGCAGGTCTTGGTTATTTATTC
GAACTCGATACTTATCTCATTGTTCTGCGGATCATTGCTGGACTAATGATGATAGCAACAGGGTTGTATATCGCTAAAAT
TTGGGTCGGAATAGTGCAGATTGAGCGTGTCGGGCAATGGTTGTGGCAGTATCTAAAACCCATAGCTCAGCGCCTTGTCC
CCATCAAAAATCCGAGCCAAGCGATAATGGCCGGATTTATTTGGGGCTGGCTCCCCTGCGGTCTTGTCTATAGCACTTTA
ACGTGGTCGGTTGCTTCAGGCTCTGCAAGCCAAGGTGCCTTAATCATGTTAGCCTTTGGCTTAGGCACCTTACCTTCATT
GTTAAGTGCTGGTGTGGCTGCTAAACACCTTGCTGTTTGGGTACAAAAGAAAACGGTTAGACTATTGAGTGGTTTACTAT
TAGTTGCCTTTGGTGGCCAAACTTTATATATCGCACTGTCGCAGCTAAACTAG

Upstream 100 bases:

>100_bases
AACCAAACAATACAGAAACGGCAGTTACTCAATCATCGGCAGAACTTGATGATATCGCAGCACTGCAAGCTATCAAAAAA
CAGCAAAAAGGCATGCCTTT

Downstream 100 bases:

>100_bases
CCCAAGTGAGTGAATTGGTTTAACATGGCTTCAGTGGATAAACTTGAGAACCGACATGACAATAGAACAAAATAAAAATC
GTCGTCCTGCAGCCAGCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MIEYNVTGAFLVGLMGAAHCFGMCGGLVGAFSAQIPHPKTGNLLTHQLKYLLSYNVGRILSYTLAGCLVGASSAGLGYLF
ELDTYLIVLRIIAGLMMIATGLYIAKIWVGIVQIERVGQWLWQYLKPIAQRLVPIKNPSQAIMAGFIWGWLPCGLVYSTL
TWSVASGSASQGALIMLAFGLGTLPSLLSAGVAAKHLAVWVQKKTVRLLSGLLLVAFGGQTLYIALSQLN

Sequences:

>Translated_230_residues
MIEYNVTGAFLVGLMGAAHCFGMCGGLVGAFSAQIPHPKTGNLLTHQLKYLLSYNVGRILSYTLAGCLVGASSAGLGYLF
ELDTYLIVLRIIAGLMMIATGLYIAKIWVGIVQIERVGQWLWQYLKPIAQRLVPIKNPSQAIMAGFIWGWLPCGLVYSTL
TWSVASGSASQGALIMLAFGLGTLPSLLSAGVAAKHLAVWVQKKTVRLLSGLLLVAFGGQTLYIALSQLN
>Mature_230_residues
MIEYNVTGAFLVGLMGAAHCFGMCGGLVGAFSAQIPHPKTGNLLTHQLKYLLSYNVGRILSYTLAGCLVGASSAGLGYLF
ELDTYLIVLRIIAGLMMIATGLYIAKIWVGIVQIERVGQWLWQYLKPIAQRLVPIKNPSQAIMAGFIWGWLPCGLVYSTL
TWSVASGSASQGALIMLAFGLGTLPSLLSAGVAAKHLAVWVQKKTVRLLSGLLLVAFGGQTLYIALSQLN

Specific function: Unknown

COG id: COG2836

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24576; Mature: 24576

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEYNVTGAFLVGLMGAAHCFGMCGGLVGAFSAQIPHPKTGNLLTHQLKYLLSYNVGRIL
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCHHHHH
SYTLAGCLVGASSAGLGYLFELDTYLIVLRIIAGLMMIATGLYIAKIWVGIVQIERVGQW
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LWQYLKPIAQRLVPIKNPSQAIMAGFIWGWLPCGLVYSTLTWSVASGSASQGALIMLAFG
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHH
LGTLPSLLSAGVAAKHLAVWVQKKTVRLLSGLLLVAFGGQTLYIALSQLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC
>Mature Secondary Structure
MIEYNVTGAFLVGLMGAAHCFGMCGGLVGAFSAQIPHPKTGNLLTHQLKYLLSYNVGRIL
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCHHHHH
SYTLAGCLVGASSAGLGYLFELDTYLIVLRIIAGLMMIATGLYIAKIWVGIVQIERVGQW
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LWQYLKPIAQRLVPIKNPSQAIMAGFIWGWLPCGLVYSTLTWSVASGSASQGALIMLAFG
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHH
LGTLPSLLSAGVAAKHLAVWVQKKTVRLLSGLLLVAFGGQTLYIALSQLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA