| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is yigI [C]
Identifier: 120598839
GI number: 120598839
Start: 2341366
End: 2341851
Strand: Direct
Name: yigI [C]
Synonym: Sputw3181_2027
Alternate gene names: 120598839
Gene position: 2341366-2341851 (Clockwise)
Preceding gene: 120598838
Following gene: 120598840
Centisome position: 49.73
GC content: 52.67
Gene sequence:
>486_bases ATGAACGAGCTAAGCAGACTCCAGCACAGTCATGTTGTTACGGCTGCGTGCCAGTTCACTGAGCAGGTTCCTCACGCTAG AGCTCTCGGCATTCAGGTCGTCTCGGTAGACCGAGACCAGGTCCGTATGCGTCTGACTCCACAGTCATGGATGTTCGCGC AAGAGGATACGAAAGAAATCTGCACCAGCTTACTTTATTCGCTGGCAGACTCCGCCGGAGGCTTGGCCGTAATTGCAGGG GCCATGGAGTTGATGCCCATTGCTACGCTGGATCTGCGCATGGATTATTTGCGGCCTGCCAACGGCGACCGAGCCCTGTT GGCTGTAGCTACCTGTCGTCATTTAACAGACCAGGTCGCGTTCATTGATTGCGACATTTTCTGCGAGGCTGATAGCGAAT TATTGGCTACGGCAAAGGCCACCTTCATGAGAAACACTCATGGACAGCAATTCCACTCAGATGGATTAAAGAAGAACAGC GTATGA
Upstream 100 bases:
>100_bases GTTATCCACAAGAGAACGCTATCTTCATGACCTATAGAATTCAACTGATCTCCAAAACTTCCGCGCCTGCAAGAAATACA TACCTAGCTGGGCAGCTTTG
Downstream 100 bases:
>100_bases GTAAGACAGATGATTTGGCACAACAAAGATCGCGCGCTGCAGAAAGTAGGGAGAAATGTGCTGACTGGAAAGCTCTGTTG GAGCGTATTCCCTACGCACA
Product: hypothetical protein
Products: NA
Alternate protein names: Thioesterase Family Protein; Thioesterase Family Protein Domain Protein; Protein Possibly Involved In Aromatic Compounds Catabolism
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MNELSRLQHSHVVTAACQFTEQVPHARALGIQVVSVDRDQVRMRLTPQSWMFAQEDTKEICTSLLYSLADSAGGLAVIAG AMELMPIATLDLRMDYLRPANGDRALLAVATCRHLTDQVAFIDCDIFCEADSELLATAKATFMRNTHGQQFHSDGLKKNS V
Sequences:
>Translated_161_residues MNELSRLQHSHVVTAACQFTEQVPHARALGIQVVSVDRDQVRMRLTPQSWMFAQEDTKEICTSLLYSLADSAGGLAVIAG AMELMPIATLDLRMDYLRPANGDRALLAVATCRHLTDQVAFIDCDIFCEADSELLATAKATFMRNTHGQQFHSDGLKKNS V >Mature_161_residues MNELSRLQHSHVVTAACQFTEQVPHARALGIQVVSVDRDQVRMRLTPQSWMFAQEDTKEICTSLLYSLADSAGGLAVIAG AMELMPIATLDLRMDYLRPANGDRALLAVATCRHLTDQVAFIDCDIFCEADSELLATAKATFMRNTHGQQFHSDGLKKNS V
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17767; Mature: 17767
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNELSRLQHSHVVTAACQFTEQVPHARALGIQVVSVDRDQVRMRLTPQSWMFAQEDTKEI CCHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEECCCCEEEEECCHHHCCCCCCHHHH CTSLLYSLADSAGGLAVIAGAMELMPIATLDLRMDYLRPANGDRALLAVATCRHLTDQVA HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEE FIDCDIFCEADSELLATAKATFMRNTHGQQFHSDGLKKNSV EEEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCC >Mature Secondary Structure MNELSRLQHSHVVTAACQFTEQVPHARALGIQVVSVDRDQVRMRLTPQSWMFAQEDTKEI CCHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEECCCCEEEEECCHHHCCCCCCHHHH CTSLLYSLADSAGGLAVIAGAMELMPIATLDLRMDYLRPANGDRALLAVATCRHLTDQVA HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEE FIDCDIFCEADSELLATAKATFMRNTHGQQFHSDGLKKNSV EEEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA