| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is aroA [H]
Identifier: 120598783
GI number: 120598783
Start: 2283324
End: 2284604
Strand: Direct
Name: aroA [H]
Synonym: Sputw3181_1969
Alternate gene names: 120598783
Gene position: 2283324-2284604 (Clockwise)
Preceding gene: 120598781
Following gene: 120598784
Centisome position: 48.49
GC content: 48.56
Gene sequence:
>1281_bases ATGAAGCAATTACGTCTTGAACCTGTTGTGCAAGTCCGCGGTGAAATCAATATTCCGGGCTCAAAAAGTATTTCAAATCG AGCCTTATTATTGGCCACCTTAGCCCAAGGTACGACCACGCTCACCAATCTGCTCGACTCAGATGATATCCGCCACATGT TGGCCTCCCTCAAGCAGTTAGGGGTGAACTACCGTTTATCGCAAAACAATACTGTGTGTGAACTCGATGGTTTAGGTGGT GTGATTTCCTCTGCATCCGCACAGGAATTGTTTTTAGGCAATGCGGGTACCGCAATGCGCCCCTTATGCGCCGCCTTAAC CTTAGGCCAAGGTGAATTTACCCTCACGGGCGAACCACGTATGGAAGAGCGTCCGATTGGCGATTTAGTCGATGCCTTAA GGAAACTCGGTGCCAATGTCGTTTACCTTAAAAATGACGGTTTCCCGCCACTGACGATTAATGCCACTGGCCTTAATGGC GGCGATGTCGAAATCGCAGGCGATTTATCGAGCCAGTTTTTAACGGCCTTATTGATGGTGGCACCGCTTGCTAAGGGCAG CGTCAATATCCATGTCAAAGGCGAGTTAGTCTCTAAGCCTTATATCGATATCACTATTGCCTTGATGGCGCAGTTTGGCG TTAACGTCATTAACCATGATTATGCCCGTTTTGAGATTGTTGCAGGCCAGCGTTATATATCACCGTGTAAAGTACTGGTA GAAGGTGATGCGTCATCGGCATCGTATTTTCTCGCGGCAGGGGCGATTAAAGGCGGCGAAGTCAAAGTCACTGGTGTGGG CCGTTTGAGTATCCAAGGCGATGTGAAATTTGCCGATGTGCTCGAAAAAATGGGCGCAGATATCGAGTGGGGCGATGACT ATATTATCGCCCGCGGCTCACCTTTAACGGCCGTCGACTTAGACATGAACCATATTCCCGATGCGGCCATGACCATTGCA ACTGCTGCGTTATTTGCCAAAGGCACAACGGTTATTCGCAATATCTACAACTGGCGCATTAAAGAAACCGACCGGTTAGC GGCCATGGCGACCGAATTACGCAAAGTGGGCGCCGAAGTTGAAGAGGGCAATGATTACATTAAAATCACTCCACCGGCGG TGATTAACACCGCTGAAATCGATACCTACAACGATCATCGCATGGCCATGTGCTTTTCTATGTTGGCATTTGCCGATTGC GGTATCACCATCAATGATCCTGACTGTACTTCCAAAACATTCCCTGACTACTTTAAGCAGTTTGCGAGCTTGCAAGGTTA A
Upstream 100 bases:
>100_bases GTAATCTTAACTTGACGCGCTGTAGCGTGAAGTTGCCATTTTGCGTATTCAGTCCGCGTGATCGTGATGATGACGCCCTA TAGAGAAAGAAGATTTATTC
Downstream 100 bases:
>100_bases GTTTTTGGGTTTCGCCATGGTTACAATAATCGATGTCAAGAATAGCAAGCCGTGTTTGCGCGGCTTCTAATCTTCACAAA AAATCAACGGATTTTGTTTG
Product: 3-phosphoshikimate 1-carboxyvinyltransferase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS [H]
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MKQLRLEPVVQVRGEINIPGSKSISNRALLLATLAQGTTTLTNLLDSDDIRHMLASLKQLGVNYRLSQNNTVCELDGLGG VISSASAQELFLGNAGTAMRPLCAALTLGQGEFTLTGEPRMEERPIGDLVDALRKLGANVVYLKNDGFPPLTINATGLNG GDVEIAGDLSSQFLTALLMVAPLAKGSVNIHVKGELVSKPYIDITIALMAQFGVNVINHDYARFEIVAGQRYISPCKVLV EGDASSASYFLAAGAIKGGEVKVTGVGRLSIQGDVKFADVLEKMGADIEWGDDYIIARGSPLTAVDLDMNHIPDAAMTIA TAALFAKGTTVIRNIYNWRIKETDRLAAMATELRKVGAEVEEGNDYIKITPPAVINTAEIDTYNDHRMAMCFSMLAFADC GITINDPDCTSKTFPDYFKQFASLQG
Sequences:
>Translated_426_residues MKQLRLEPVVQVRGEINIPGSKSISNRALLLATLAQGTTTLTNLLDSDDIRHMLASLKQLGVNYRLSQNNTVCELDGLGG VISSASAQELFLGNAGTAMRPLCAALTLGQGEFTLTGEPRMEERPIGDLVDALRKLGANVVYLKNDGFPPLTINATGLNG GDVEIAGDLSSQFLTALLMVAPLAKGSVNIHVKGELVSKPYIDITIALMAQFGVNVINHDYARFEIVAGQRYISPCKVLV EGDASSASYFLAAGAIKGGEVKVTGVGRLSIQGDVKFADVLEKMGADIEWGDDYIIARGSPLTAVDLDMNHIPDAAMTIA TAALFAKGTTVIRNIYNWRIKETDRLAAMATELRKVGAEVEEGNDYIKITPPAVINTAEIDTYNDHRMAMCFSMLAFADC GITINDPDCTSKTFPDYFKQFASLQG >Mature_426_residues MKQLRLEPVVQVRGEINIPGSKSISNRALLLATLAQGTTTLTNLLDSDDIRHMLASLKQLGVNYRLSQNNTVCELDGLGG VISSASAQELFLGNAGTAMRPLCAALTLGQGEFTLTGEPRMEERPIGDLVDALRKLGANVVYLKNDGFPPLTINATGLNG GDVEIAGDLSSQFLTALLMVAPLAKGSVNIHVKGELVSKPYIDITIALMAQFGVNVINHDYARFEIVAGQRYISPCKVLV EGDASSASYFLAAGAIKGGEVKVTGVGRLSIQGDVKFADVLEKMGADIEWGDDYIIARGSPLTAVDLDMNHIPDAAMTIA TAALFAKGTTVIRNIYNWRIKETDRLAAMATELRKVGAEVEEGNDYIKITPPAVINTAEIDTYNDHRMAMCFSMLAFADC GITINDPDCTSKTFPDYFKQFASLQG
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; sixth step. [C]
COG id: COG0128
COG function: function code E; 5-enolpyruvylshikimate-3-phosphate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the EPSP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1787137, Length=424, Percent_Identity=66.9811320754717, Blast_Score=568, Evalue=1e-163, Organism=Saccharomyces cerevisiae, GI6320332, Length=451, Percent_Identity=37.9157427937916, Blast_Score=251, Evalue=1e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001986 - InterPro: IPR006264 - InterPro: IPR023193 - InterPro: IPR013792 [H]
Pfam domain/function: PF00275 EPSP_synthase [H]
EC number: =2.5.1.19 [H]
Molecular weight: Translated: 45712; Mature: 45712
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS00104 EPSP_SYNTHASE_1 ; PS00885 EPSP_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQLRLEPVVQVRGEINIPGSKSISNRALLLATLAQGTTTLTNLLDSDDIRHMLASLKQL CCCCCCCCCEEECCEEECCCCCCCCCCEEEEEEHHCCHHHHHHHHCCHHHHHHHHHHHHC GVNYRLSQNNTVCELDGLGGVISSASAQELFLGNAGTAMRPLCAALTLGQGEFTLTGEPR CCEEEECCCCCEEEECCCCCHHCCCCCCCEEECCCCCHHHHHHHHHEECCCCEEECCCCC MEERPIGDLVDALRKLGANVVYLKNDGFPPLTINATGLNGGDVEIAGDLSSQFLTALLMV CCCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCCCCEEEECCHHHHHHHHHHHH APLAKGSVNIHVKGELVSKPYIDITIALMAQFGVNVINHDYARFEIVAGQRYISPCKVLV HHCCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCHHHCCCCEEEEEEECCCCCCCEEEEE EGDASSASYFLAAGAIKGGEVKVTGVGRLSIQGDVKFADVLEKMGADIEWGDDYIIARGS ECCCCCCEEEEEECCCCCCEEEEEEEEEEEEECCCHHHHHHHHHCCCCCCCCCEEEECCC PLTAVDLDMNHIPDAAMTIATAALFAKGTTVIRNIYNWRIKETDRLAAMATELRKVGAEV CCEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCEECCHHHHHHHHHHHHHHCCCH EEGNDYIKITPPAVINTAEIDTYNDHRMAMCFSMLAFADCGITINDPDCTSKTFPDYFKQ HCCCCEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHH FASLQG HHCCCC >Mature Secondary Structure MKQLRLEPVVQVRGEINIPGSKSISNRALLLATLAQGTTTLTNLLDSDDIRHMLASLKQL CCCCCCCCCEEECCEEECCCCCCCCCCEEEEEEHHCCHHHHHHHHCCHHHHHHHHHHHHC GVNYRLSQNNTVCELDGLGGVISSASAQELFLGNAGTAMRPLCAALTLGQGEFTLTGEPR CCEEEECCCCCEEEECCCCCHHCCCCCCCEEECCCCCHHHHHHHHHEECCCCEEECCCCC MEERPIGDLVDALRKLGANVVYLKNDGFPPLTINATGLNGGDVEIAGDLSSQFLTALLMV CCCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCCCCEEEECCHHHHHHHHHHHH APLAKGSVNIHVKGELVSKPYIDITIALMAQFGVNVINHDYARFEIVAGQRYISPCKVLV HHCCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCHHHCCCCEEEEEEECCCCCCCEEEEE EGDASSASYFLAAGAIKGGEVKVTGVGRLSIQGDVKFADVLEKMGADIEWGDDYIIARGS ECCCCCCEEEEEECCCCCCEEEEEEEEEEEEECCCHHHHHHHHHCCCCCCCCCEEEECCC PLTAVDLDMNHIPDAAMTIATAALFAKGTTVIRNIYNWRIKETDRLAAMATELRKVGAEV CCEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCEECCHHHHHHHHHHHHHHCCCH EEGNDYIKITPPAVINTAEIDTYNDHRMAMCFSMLAFADCGITINDPDCTSKTFPDYFKQ HCCCCEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHH FASLQG HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA