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The map label for this gene is 120598772

Identifier: 120598772

GI number: 120598772

Start: 2264010

End: 2265119

Strand: Direct

Name: 120598772

Synonym: Sputw3181_1957

Alternate gene names: NA

Gene position: 2264010-2265119 (Clockwise)

Preceding gene: 120598771

Following gene: 120598773

Centisome position: 48.08

GC content: 45.77

Gene sequence:

>1110_bases
ATGGACGCAAAGCTAACCATGGATAATATAATCTCGAAAACTAACGCAAAATTCGGTCTGTTATCAGCCTTTATTACCTC
AATGCTGTTGCCTGTGTGTGCAGCGAGTTCCTCGCCCGTTCTAGCGCTTCCAGCTTCTCAAACTAGCGTGACGTCAAGTG
CAGTTCAAGATGCCCCTTTTATTGAGCGCCGCGCGGATCCTTGGGTTATAAAAGATGATGATGGGAGCTATTACTTTATT
GCATCTGTACCCGAGTTTGATCGGATAGAGCTTCGTCATGCCGCAAATATTCAAGGATTAAGTCAAGCTATCCCCAAAAT
TATTTGGCGTAAGCATACATCAGGGCCAATGAGTATCGACATTTGGGCGCCAGAACTGCATAAAATTGATGGTCGCTGGT
ATATCTATTATGCTGCCAGTGATAAAGACAGACGCTTTCATAACCGCATGTTTGTATTGGGGCTTGAAGGTGACAACCCC
ATGAAGGGCGATTGGCAAGAGCTTGGCCGTTTAAAAACCGCAAGGGATGGATTTTCCTTAGATGCCACCCACTTTAGTGT
TGGCGGGCAGGGCTATTTTATTTGGGCGCAGCAGGACGATGCCAAAAGCTACAATACGGGACTGGTGATTGCCAAAATGC
TGTCACCTACAGCGGCATCACCACAAGAAGCAATCATCAGTGAGCCTTTGCTGGATTGGGAAAGGCAAGGCTTTAAAGTT
AATGAAGGCGCTGCGGTATTGGTGAAAAATGGGAAGGTATTTGTCACTTATTCTGCCAGTGCAACAGATGATCGTTATGC
GATGGGACTCCTTTGGGCGGAGCAAGATGCAGATCTGCTCGACCCCAAAAATTGGCATAAAGTTTCTGAGCCTGTTTTTA
GCACAGAGCCTACACTTAATCGCTTTGGTCCTGGACATAACAGCTTTGTGCTTGCCGAAGATGGTCAAACCGAGTTGATG
TTTTACCATGCTCGCAATTACCTTGAACTTCAAGGCACGCCATTAACCGATGGTAATCGCCATACTTACTACCGCGCTAT
TTCATGGACAGAGAATGGATTCCCTGTATTTCACAATGAGCTGGCAGATAATGTGGTCGATATAAAATAA

Upstream 100 bases:

>100_bases
CAAACCTACATCACCTTTGACGGTACACTCAGTAGTTGGTGGACCAAGATAGTAATTGGCTTATTGCTATTTTTCTTCAT
CGTGTTACAGAAACTCTTGA

Downstream 100 bases:

>100_bases
CAGAGTAATAGTGTGGCAGTTATCAAAGCAGAAAAGCGATTAACAGGTGCTTACATCATGCTTGTTAATCTTTTGTGATA
AATACCGGCTTTGATGTTTG

Product: Alpha-N-arabinofuranosidase

Products: NA

Alternate protein names: Alpha-N-arabinofuranosidase II; Alpha-N-AFase II; Arabinosidase II [H]

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MDAKLTMDNIISKTNAKFGLLSAFITSMLLPVCAASSSPVLALPASQTSVTSSAVQDAPFIERRADPWVIKDDDGSYYFI
ASVPEFDRIELRHAANIQGLSQAIPKIIWRKHTSGPMSIDIWAPELHKIDGRWYIYYAASDKDRRFHNRMFVLGLEGDNP
MKGDWQELGRLKTARDGFSLDATHFSVGGQGYFIWAQQDDAKSYNTGLVIAKMLSPTAASPQEAIISEPLLDWERQGFKV
NEGAAVLVKNGKVFVTYSASATDDRYAMGLLWAEQDADLLDPKNWHKVSEPVFSTEPTLNRFGPGHNSFVLAEDGQTELM
FYHARNYLELQGTPLTDGNRHTYYRAISWTENGFPVFHNELADNVVDIK

Sequences:

>Translated_369_residues
MDAKLTMDNIISKTNAKFGLLSAFITSMLLPVCAASSSPVLALPASQTSVTSSAVQDAPFIERRADPWVIKDDDGSYYFI
ASVPEFDRIELRHAANIQGLSQAIPKIIWRKHTSGPMSIDIWAPELHKIDGRWYIYYAASDKDRRFHNRMFVLGLEGDNP
MKGDWQELGRLKTARDGFSLDATHFSVGGQGYFIWAQQDDAKSYNTGLVIAKMLSPTAASPQEAIISEPLLDWERQGFKV
NEGAAVLVKNGKVFVTYSASATDDRYAMGLLWAEQDADLLDPKNWHKVSEPVFSTEPTLNRFGPGHNSFVLAEDGQTELM
FYHARNYLELQGTPLTDGNRHTYYRAISWTENGFPVFHNELADNVVDIK
>Mature_369_residues
MDAKLTMDNIISKTNAKFGLLSAFITSMLLPVCAASSSPVLALPASQTSVTSSAVQDAPFIERRADPWVIKDDDGSYYFI
ASVPEFDRIELRHAANIQGLSQAIPKIIWRKHTSGPMSIDIWAPELHKIDGRWYIYYAASDKDRRFHNRMFVLGLEGDNP
MKGDWQELGRLKTARDGFSLDATHFSVGGQGYFIWAQQDDAKSYNTGLVIAKMLSPTAASPQEAIISEPLLDWERQGFKV
NEGAAVLVKNGKVFVTYSASATDDRYAMGLLWAEQDADLLDPKNWHKVSEPVFSTEPTLNRFGPGHNSFVLAEDGQTELM
FYHARNYLELQGTPLTDGNRHTYYRAISWTENGFPVFHNELADNVVDIK

Specific function: Unknown

COG id: COG3940

COG function: function code R; Predicted beta-xylosidase

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 43 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016828
- InterPro:   IPR006710
- InterPro:   IPR006311 [H]

Pfam domain/function: PF04616 Glyco_hydro_43 [H]

EC number: =3.2.1.55 [H]

Molecular weight: Translated: 41306; Mature: 41306

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAKLTMDNIISKTNAKFGLLSAFITSMLLPVCAASSSPVLALPASQTSVTSSAVQDAPF
CCCEECHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHCCCH
IERRADPWVIKDDDGSYYFIASVPEFDRIELRHAANIQGLSQAIPKIIWRKHTSGPMSID
HHHCCCCCEEECCCCCEEEEEECCCCCCEEEHHHCCCCHHHHHHHHHHEECCCCCCEEEE
IWAPELHKIDGRWYIYYAASDKDRRFHNRMFVLGLEGDNPMKGDWQELGRLKTARDGFSL
EECCHHEEECCEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCEE
DATHFSVGGQGYFIWAQQDDAKSYNTGLVIAKMLSPTAASPQEAIISEPLLDWERQGFKV
ECEEEEECCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCHHHHHHCCHHHHHHCCEEE
NEGAAVLVKNGKVFVTYSASATDDRYAMGLLWAEQDADLLDPKNWHKVSEPVFSTEPTLN
CCCCEEEEECCEEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCHH
RFGPGHNSFVLAEDGQTELMFYHARNYLELQGTPLTDGNRHTYYRAISWTENGFPVFHNE
HCCCCCCEEEEEECCCEEEEEEECCCEEEEECCCCCCCCCEEEEEEEEECCCCCCCHHHH
LADNVVDIK
HHCCEECCC
>Mature Secondary Structure
MDAKLTMDNIISKTNAKFGLLSAFITSMLLPVCAASSSPVLALPASQTSVTSSAVQDAPF
CCCEECHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHCCCH
IERRADPWVIKDDDGSYYFIASVPEFDRIELRHAANIQGLSQAIPKIIWRKHTSGPMSID
HHHCCCCCEEECCCCCEEEEEECCCCCCEEEHHHCCCCHHHHHHHHHHEECCCCCCEEEE
IWAPELHKIDGRWYIYYAASDKDRRFHNRMFVLGLEGDNPMKGDWQELGRLKTARDGFSL
EECCHHEEECCEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCEE
DATHFSVGGQGYFIWAQQDDAKSYNTGLVIAKMLSPTAASPQEAIISEPLLDWERQGFKV
ECEEEEECCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCHHHHHHCCHHHHHHCCEEE
NEGAAVLVKNGKVFVTYSASATDDRYAMGLLWAEQDADLLDPKNWHKVSEPVFSTEPTLN
CCCCEEEEECCEEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCHH
RFGPGHNSFVLAEDGQTELMFYHARNYLELQGTPLTDGNRHTYYRAISWTENGFPVFHNE
HCCCCCCEEEEEECCCEEEEEEECCCEEEEECCCCCCCCCEEEEEEEEECCCCCCCHHHH
LADNVVDIK
HHCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10657233 [H]