| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is mro [H]
Identifier: 120598767
GI number: 120598767
Start: 2258304
End: 2259359
Strand: Direct
Name: mro [H]
Synonym: Sputw3181_1952
Alternate gene names: 120598767
Gene position: 2258304-2259359 (Clockwise)
Preceding gene: 120598766
Following gene: 120598768
Centisome position: 47.96
GC content: 37.5
Gene sequence:
>1056_bases ATGTCACTCTCAATCTCTACACAACAATTAACGCATAGCACCTTCCCTGCACCATTAGAGTTAATAACATTAACGAATAG TCATGGTTTGGAAGTAGTGTTATCGAGTTATGGTGCAAGTATTTGGTCTGTCAAACTCTATGAAAAAGAAGATAAAACCA TTGATCTCAGTTTGAGTTATCAGAATATTCAAGATTGGGCAATAAACCCTTATTATTTTGGTATTACTGCAGGCCGCGTT GCAAATCGAATTGGTGGAGCTGCATTTTCTTTAAAGGGTCAAACCATTGTATTAACCCCGAATGAAGGTAATAACCAACT TCACGGTGGTCCGCAAGGCTTAAGTCACTGTGTTTGGCAATGTGAAACTAAGCAATATTCCGATGCTGTTGGTGCCATTT TTAGGATACAGAGTCCTGATGGTGATCAAGGTTATCCTGGGGATTTATCCGTAACAGTCGAATATCGCCTTAGTGAAAGC AATGAGTTAATCCTGATTTACGATGCTCTATCAGACCAAACCACTCCGGTTTGTCTCACAAATCATGCCTATTGGAATCT CGCATCTGACAAGCAACATGGCATCTTAGGCCATAACTTACAACTCAATGCGAGTCATATTTTAGCCTTAGATTCTGAGC AAATTCCTACGGGTGAATTGGTTTTAGTCGATGATACCCCCTTCGATTTTCGTCAAATAAAATCCATATCTGAAGATATT CATAAATTAAGTAATGGTTATGACCACTATTTTGTGATGTCGAAGGATATAGACAATACCTCATGCTTAAAAACCATCGC CACATTAATCGAACCTATTTCAGGACGTGAATTGGAAATCAGCACTACAGAATTAGGTGTGCAATTTTATAGTGGTAACT TTTTAGATGGTACGCGGCTTGATAATCATGGAAAACCGTTAAATCAATATCAAGGTTTATGTTTAGAAACCCATGGTTAT CCTAATGCCGTCAATATTGCTCATTTTCCGAGTGTTATGTTAGAGGAAAATAAACCCTATAAACAAATAACGGTGCATAG ATTTAAAAATATTTAA
Upstream 100 bases:
>100_bases ATTAACAATAAAGTCTTTGTTGATTAAGTCGTCATTATCTTACATAGATAGCTGAGGATGAGTGCTGAGAAAACTTATTA TAAAAGGTGAAAGCACTCAT
Downstream 100 bases:
>100_bases TTTAAACCGTGTGTGACACTTTAGTCATATAACGAATTAGTCATATTAGTTTAATTGAGTTTGATCTTCTGCATTAAGAA GGTCTGGGGATTGCTGTTAT
Product: aldose 1-epimerase
Products: NA
Alternate protein names: Galactose mutarotase; Type-1 mutarotase [H]
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MSLSISTQQLTHSTFPAPLELITLTNSHGLEVVLSSYGASIWSVKLYEKEDKTIDLSLSYQNIQDWAINPYYFGITAGRV ANRIGGAAFSLKGQTIVLTPNEGNNQLHGGPQGLSHCVWQCETKQYSDAVGAIFRIQSPDGDQGYPGDLSVTVEYRLSES NELILIYDALSDQTTPVCLTNHAYWNLASDKQHGILGHNLQLNASHILALDSEQIPTGELVLVDDTPFDFRQIKSISEDI HKLSNGYDHYFVMSKDIDNTSCLKTIATLIEPISGRELEISTTELGVQFYSGNFLDGTRLDNHGKPLNQYQGLCLETHGY PNAVNIAHFPSVMLEENKPYKQITVHRFKNI
Sequences:
>Translated_351_residues MSLSISTQQLTHSTFPAPLELITLTNSHGLEVVLSSYGASIWSVKLYEKEDKTIDLSLSYQNIQDWAINPYYFGITAGRV ANRIGGAAFSLKGQTIVLTPNEGNNQLHGGPQGLSHCVWQCETKQYSDAVGAIFRIQSPDGDQGYPGDLSVTVEYRLSES NELILIYDALSDQTTPVCLTNHAYWNLASDKQHGILGHNLQLNASHILALDSEQIPTGELVLVDDTPFDFRQIKSISEDI HKLSNGYDHYFVMSKDIDNTSCLKTIATLIEPISGRELEISTTELGVQFYSGNFLDGTRLDNHGKPLNQYQGLCLETHGY PNAVNIAHFPSVMLEENKPYKQITVHRFKNI >Mature_350_residues SLSISTQQLTHSTFPAPLELITLTNSHGLEVVLSSYGASIWSVKLYEKEDKTIDLSLSYQNIQDWAINPYYFGITAGRVA NRIGGAAFSLKGQTIVLTPNEGNNQLHGGPQGLSHCVWQCETKQYSDAVGAIFRIQSPDGDQGYPGDLSVTVEYRLSESN ELILIYDALSDQTTPVCLTNHAYWNLASDKQHGILGHNLQLNASHILALDSEQIPTGELVLVDDTPFDFRQIKSISEDIH KLSNGYDHYFVMSKDIDNTSCLKTIATLIEPISGRELEISTTELGVQFYSGNFLDGTRLDNHGKPLNQYQGLCLETHGYP NAVNIAHFPSVMLEENKPYKQITVHRFKNI
Specific function: Mutarotase converts alpha-aldose to the beta-anomer. It is active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose [H]
COG id: COG2017
COG function: function code G; Galactose mutarotase and related enzymes
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldose epimerase family [H]
Homologues:
Organism=Homo sapiens, GI20270355, Length=320, Percent_Identity=36.875, Blast_Score=206, Evalue=3e-53, Organism=Escherichia coli, GI1786971, Length=338, Percent_Identity=33.4319526627219, Blast_Score=191, Evalue=6e-50, Organism=Caenorhabditis elegans, GI17557428, Length=334, Percent_Identity=31.7365269461078, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI115533334, Length=334, Percent_Identity=31.7365269461078, Blast_Score=160, Evalue=1e-39, Organism=Saccharomyces cerevisiae, GI6319493, Length=343, Percent_Identity=25.9475218658892, Blast_Score=92, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6322004, Length=359, Percent_Identity=27.2980501392758, Blast_Score=90, Evalue=5e-19, Organism=Saccharomyces cerevisiae, GI6324399, Length=349, Percent_Identity=24.6418338108883, Blast_Score=82, Evalue=1e-16, Organism=Drosophila melanogaster, GI24583720, Length=363, Percent_Identity=33.6088154269972, Blast_Score=196, Evalue=2e-50, Organism=Drosophila melanogaster, GI24659048, Length=343, Percent_Identity=34.9854227405248, Blast_Score=195, Evalue=4e-50, Organism=Drosophila melanogaster, GI24668278, Length=348, Percent_Identity=35.0574712643678, Blast_Score=189, Evalue=2e-48, Organism=Drosophila melanogaster, GI24668282, Length=363, Percent_Identity=31.9559228650138, Blast_Score=167, Evalue=1e-41, Organism=Drosophila melanogaster, GI24641876, Length=341, Percent_Identity=28.7390029325513, Blast_Score=149, Evalue=3e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018052 - InterPro: IPR008183 - InterPro: IPR015443 - InterPro: IPR011013 - InterPro: IPR014718 [H]
Pfam domain/function: PF01263 Aldose_epim [H]
EC number: =5.1.3.3 [H]
Molecular weight: Translated: 39008; Mature: 38877
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSISTQQLTHSTFPAPLELITLTNSHGLEVVLSSYGASIWSVKLYEKEDKTIDLSLSY CCCCCCHHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCEEEEEEEEECCCCEEEEEEEE QNIQDWAINPYYFGITAGRVANRIGGAAFSLKGQTIVLTPNEGNNQLHGGPQGLSHCVWQ CCCCCCCCCCEEEEEEHHHHHHHCCCEEEEECCCEEEECCCCCCCCCCCCHHHHHHHHEE CETKQYSDAVGAIFRIQSPDGDQGYPGDLSVTVEYRLSESNELILIYDALSDQTTPVCLT ECCHHHCCCCEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCEEEE NHAYWNLASDKQHGILGHNLQLNASHILALDSEQIPTGELVLVDDTPFDFRQIKSISEDI CCEEEEECCCCCCCEECCCEEECCCEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHH HKLSNGYDHYFVMSKDIDNTSCLKTIATLIEPISGRELEISTTELGVQFYSGNFLDGTRL HHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEHEEEEEEECCCCCCCCEE DNHGKPLNQYQGLCLETHGYPNAVNIAHFPSVMLEENKPYKQITVHRFKNI CCCCCCHHHHCCEEEEECCCCCEEEHHHCCCEEECCCCCHHHEEHHHHCCC >Mature Secondary Structure SLSISTQQLTHSTFPAPLELITLTNSHGLEVVLSSYGASIWSVKLYEKEDKTIDLSLSY CCCCCHHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCEEEEEEEEECCCCEEEEEEEE QNIQDWAINPYYFGITAGRVANRIGGAAFSLKGQTIVLTPNEGNNQLHGGPQGLSHCVWQ CCCCCCCCCCEEEEEEHHHHHHHCCCEEEEECCCEEEECCCCCCCCCCCCHHHHHHHHEE CETKQYSDAVGAIFRIQSPDGDQGYPGDLSVTVEYRLSESNELILIYDALSDQTTPVCLT ECCHHHCCCCEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCEEEE NHAYWNLASDKQHGILGHNLQLNASHILALDSEQIPTGELVLVDDTPFDFRQIKSISEDI CCEEEEECCCCCCCEECCCEEECCCEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHH HKLSNGYDHYFVMSKDIDNTSCLKTIATLIEPISGRELEISTTELGVQFYSGNFLDGTRL HHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEHEEEEEEECCCCCCCCEE DNHGKPLNQYQGLCLETHGYPNAVNIAHFPSVMLEENKPYKQITVHRFKNI CCCCCCHHHHCCEEEEECCCCCEEEHHHCCCEEECCCCCHHHEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3012466; 3531172 [H]