BacMap

Definition	Shewanella sp. W3-18-1 chromosome, complete genome.
Accession	NC_008750
Length	4,708,380

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The map label for this gene is fabG [H]

Identifier: 120598766

GI number: 120598766

Start: 2257431

End: 2258201

Strand: Direct

Name: fabG [H]

Synonym: Sputw3181_1951

Alternate gene names: 120598766

Gene position: 2257431-2258201 (Clockwise)

Preceding gene: 120598765

Following gene: 120598767

Centisome position: 47.94

GC content: 43.06

Gene sequence:

>771_bases
ATGAAGTTAAGTAATCAATACCCGAGCTTGAAAGGAAAAACCATTTTTATCAGTGGTGGCGGTACGGGTATTGGCGCCTG
TTTAGTGAGATCATTCTTAGAGCAGGGCGCAAAAGTTGCATTTGCCGACATACTTATAACGGAATCAAATCAACTTGTTA
GTACCTTATTAGCCAGTATGCCCGATGCAATAGTGAAATTTTATCCCTGTGATCTCGTGGATATTGCAGCACTAAAAAAC
GTCGTTACGCAGATAGAGCAGGAAATTGGAACCATTGCGGTATTGATTAATAACGCCGCCTGCGATGAGCGCCATAGCAT
AGATGAAGTGACTCCTGAGTATTGGGATCACTGTTTAAACACCAATTTACGGCATTATTTTTTTGCAGTGCAAGCGGTAA
GGCCGCAAATGCAACGTCTGGGTGGCGGTTCAGTGATCAATTTAGGCTCAATGAGTTGGCATAATCGCCAGCCGGGTATG
GCAGGCTATACCGCCTCTAAAGCTGGTGCTATGGGATTGACTCGCGGATTAGCTGCGGATTTAGGTAAAGATAGAATTCG
AATTAATACCTTGACCCCAGGTTGGGTGATGACGAAGCGTCAATTAACGCACTGGGTTGATAAGGATACGGCAAAACATA
TTGAAGATAATCAATGTATTAAAGAATATGTGATGCCTGAAGATATTGCCGCTATGGCGTTATTTTTGGCAGCCGATGAT
AGCAAACTCTGCACTGCACAAAATTTTATTGTAGATGGTGGCTGGATTTAA

Upstream 100 bases:

>100_bases
TGGGATGTCGGGGTGCTGATATTCCGGCACATTCCCATTAAACATGGACACTTTTTCTTTTATAATAAAACCAAATAATT
ATTTTAATAAAGGTTGAGTT

Downstream 100 bases:

>100_bases
TCATTAACAATAAAGTCTTTGTTGATTAAGTCGTCATTATCTTACATAGATAGCTGAGGATGAGTGCTGAGAAAACTTAT
TATAAAAGGTGAAAGCACTC

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MKLSNQYPSLKGKTIFISGGGTGIGACLVRSFLEQGAKVAFADILITESNQLVSTLLASMPDAIVKFYPCDLVDIAALKN
VVTQIEQEIGTIAVLINNAACDERHSIDEVTPEYWDHCLNTNLRHYFFAVQAVRPQMQRLGGGSVINLGSMSWHNRQPGM
AGYTASKAGAMGLTRGLAADLGKDRIRINTLTPGWVMTKRQLTHWVDKDTAKHIEDNQCIKEYVMPEDIAAMALFLAADD
SKLCTAQNFIVDGGWI

Sequences:

>Translated_256_residues
MKLSNQYPSLKGKTIFISGGGTGIGACLVRSFLEQGAKVAFADILITESNQLVSTLLASMPDAIVKFYPCDLVDIAALKN
VVTQIEQEIGTIAVLINNAACDERHSIDEVTPEYWDHCLNTNLRHYFFAVQAVRPQMQRLGGGSVINLGSMSWHNRQPGM
AGYTASKAGAMGLTRGLAADLGKDRIRINTLTPGWVMTKRQLTHWVDKDTAKHIEDNQCIKEYVMPEDIAAMALFLAADD
SKLCTAQNFIVDGGWI
>Mature_256_residues
MKLSNQYPSLKGKTIFISGGGTGIGACLVRSFLEQGAKVAFADILITESNQLVSTLLASMPDAIVKFYPCDLVDIAALKN
VVTQIEQEIGTIAVLINNAACDERHSIDEVTPEYWDHCLNTNLRHYFFAVQAVRPQMQRLGGGSVINLGSMSWHNRQPGM
AGYTASKAGAMGLTRGLAADLGKDRIRINTLTPGWVMTKRQLTHWVDKDTAKHIEDNQCIKEYVMPEDIAAMALFLAADD
SKLCTAQNFIVDGGWI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=246, Percent_Identity=30.0813008130081, Blast_Score=118, Evalue=5e-27,
Organism=Homo sapiens, GI126723750, Length=252, Percent_Identity=26.1904761904762, Blast_Score=92, Evalue=3e-19,
Organism=Homo sapiens, GI19923817, Length=256, Percent_Identity=26.5625, Blast_Score=92, Evalue=4e-19,
Organism=Homo sapiens, GI7705925, Length=247, Percent_Identity=26.7206477732794, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI15277342, Length=253, Percent_Identity=26.4822134387352, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI66933014, Length=256, Percent_Identity=26.5625, Blast_Score=85, Evalue=6e-17,
Organism=Homo sapiens, GI40254992, Length=189, Percent_Identity=26.984126984127, Blast_Score=81, Evalue=8e-16,
Organism=Homo sapiens, GI31542939, Length=243, Percent_Identity=25.9259259259259, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI126723191, Length=212, Percent_Identity=27.3584905660377, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI302344755, Length=124, Percent_Identity=33.8709677419355, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI109715829, Length=235, Percent_Identity=24.2553191489362, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI5031737, Length=247, Percent_Identity=22.6720647773279, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI59889578, Length=231, Percent_Identity=25.1082251082251, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI1789208, Length=250, Percent_Identity=28.8, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1790717, Length=260, Percent_Identity=28.4615384615385, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1786812, Length=253, Percent_Identity=27.2727272727273, Blast_Score=101, Evalue=6e-23,
Organism=Escherichia coli, GI1787905, Length=250, Percent_Identity=29.2, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1787335, Length=247, Percent_Identity=25.9109311740891, Blast_Score=94, Evalue=9e-21,
Organism=Escherichia coli, GI2367365, Length=250, Percent_Identity=30, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI87082100, Length=257, Percent_Identity=26.0700389105058, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI87082160, Length=254, Percent_Identity=22.8346456692913, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1788459, Length=171, Percent_Identity=28.0701754385965, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1789378, Length=247, Percent_Identity=24.6963562753036, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1789057, Length=251, Percent_Identity=24.3027888446215, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787820, Length=183, Percent_Identity=25.6830601092896, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI2367175, Length=244, Percent_Identity=24.1803278688525, Blast_Score=62, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17561402, Length=259, Percent_Identity=30.1158301158301, Blast_Score=109, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI115534694, Length=245, Percent_Identity=30.2040816326531, Blast_Score=97, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI25147288, Length=248, Percent_Identity=26.6129032258064, Blast_Score=89, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17567345, Length=194, Percent_Identity=28.8659793814433, Blast_Score=84, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17555706, Length=247, Percent_Identity=24.6963562753036, Blast_Score=80, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI17508895, Length=192, Percent_Identity=24.4791666666667, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17538480, Length=266, Percent_Identity=27.4436090225564, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17536025, Length=251, Percent_Identity=23.9043824701195, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI193203115, Length=191, Percent_Identity=25.130890052356, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI193203117, Length=191, Percent_Identity=25.130890052356, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17559104, Length=258, Percent_Identity=26.3565891472868, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17551412, Length=266, Percent_Identity=27.0676691729323, Blast_Score=71, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI71994604, Length=244, Percent_Identity=24.1803278688525, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17560676, Length=162, Percent_Identity=22.8395061728395, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17563726, Length=268, Percent_Identity=26.865671641791, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17562908, Length=264, Percent_Identity=26.5151515151515, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17531453, Length=265, Percent_Identity=24.9056603773585, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17560332, Length=261, Percent_Identity=26.4367816091954, Blast_Score=68, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI193204405, Length=262, Percent_Identity=26.7175572519084, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17562906, Length=265, Percent_Identity=27.5471698113208, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71994600, Length=182, Percent_Identity=26.9230769230769, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17562904, Length=266, Percent_Identity=25.9398496240602, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17564282, Length=183, Percent_Identity=24.5901639344262, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17544670, Length=269, Percent_Identity=26.3940520446097, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17536651, Length=251, Percent_Identity=21.9123505976096, Blast_Score=64, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17561272, Length=240, Percent_Identity=25.4166666666667, Blast_Score=64, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=246, Percent_Identity=24.7967479674797, Blast_Score=79, Evalue=8e-16,
Organism=Saccharomyces cerevisiae, GI6322861, Length=246, Percent_Identity=26.4227642276423, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24644339, Length=253, Percent_Identity=27.6679841897233, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI21357041, Length=251, Percent_Identity=26.6932270916335, Blast_Score=98, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24643142, Length=246, Percent_Identity=25.2032520325203, Blast_Score=91, Evalue=5e-19,
Organism=Drosophila melanogaster, GI28571526, Length=250, Percent_Identity=26.4, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24639444, Length=253, Percent_Identity=26.0869565217391, Blast_Score=82, Evalue=2e-16,
Organism=Drosophila melanogaster, GI23397609, Length=252, Percent_Identity=25.3968253968254, Blast_Score=80, Evalue=9e-16,
Organism=Drosophila melanogaster, GI21355319, Length=249, Percent_Identity=20.8835341365462, Blast_Score=77, Evalue=8e-15,
Organism=Drosophila melanogaster, GI21355631, Length=172, Percent_Identity=26.7441860465116, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI21358495, Length=234, Percent_Identity=25.6410256410256, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24649181, Length=204, Percent_Identity=24.0196078431373, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24644337, Length=173, Percent_Identity=27.1676300578035, Blast_Score=70, Evalue=9e-13,
Organism=Drosophila melanogaster, GI281364892, Length=195, Percent_Identity=26.6666666666667, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 28021; Mature: 28021

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSNQYPSLKGKTIFISGGGTGIGACLVRSFLEQGAKVAFADILITESNQLVSTLLASM
CCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEEECCHHHHHHHHHHC
PDAIVKFYPCDLVDIAALKNVVTQIEQEIGTIAVLINNAACDERHSIDEVTPEYWDHCLN
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCHHHCCHHHHHHHHC
TNLRHYFFAVQAVRPQMQRLGGGSVINLGSMSWHNRQPGMAGYTASKAGAMGLTRGLAAD
CCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
LGKDRIRINTLTPGWVMTKRQLTHWVDKDTAKHIEDNQCIKEYVMPEDIAAMALFLAADD
CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCC
SKLCTAQNFIVDGGWI
CCEEECCCEEECCCCC
>Mature Secondary Structure
MKLSNQYPSLKGKTIFISGGGTGIGACLVRSFLEQGAKVAFADILITESNQLVSTLLASM
CCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEEECCHHHHHHHHHHC
PDAIVKFYPCDLVDIAALKNVVTQIEQEIGTIAVLINNAACDERHSIDEVTPEYWDHCLN
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCHHHCCHHHHHHHHC
TNLRHYFFAVQAVRPQMQRLGGGSVINLGSMSWHNRQPGMAGYTASKAGAMGLTRGLAAD
CCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
LGKDRIRINTLTPGWVMTKRQLTHWVDKDTAKHIEDNQCIKEYVMPEDIAAMALFLAADD
CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCC
SKLCTAQNFIVDGGWI
CCEEECCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]