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The map label for this gene is araB [H]

Identifier: 120598759

GI number: 120598759

Start: 2248872

End: 2250545

Strand: Direct

Name: araB [H]

Synonym: Sputw3181_1944

Alternate gene names: 120598759

Gene position: 2248872-2250545 (Clockwise)

Preceding gene: 120598758

Following gene: 120598760

Centisome position: 47.76

GC content: 47.49

Gene sequence:

>1674_bases
ATGGCTAATGTTTTAGGGTCTTACGCGTTAGGGCTAGATTACGGTTCTGATTCGGTTCGCGCGTTATTGGTTGATACGCT
GACAGGTGTTGAGGTTGCCACTAATGTGGTCTATTACCCACGGTGGAAAAAGGGGTTATTTTGCGATCCTGCTAAAAATC
AATTTAGGCAGCATCCACTCGATTACATTGAAAGTTTAATTGACGTTGTTCAGGGGCTTTGGACTAAAGCGCCACCGGGA
GCCGCTGAAAAAGTGTGTGGTTTGAGTGTCGATACCACAGGTTCGACTCCGATTGCTGTTGATGAGTCAGGTATGGCATT
GGCACTTAAAGACGAATTTGCTAATAACCCTAATGCAATGTTTTTACTCTGGAAAGACCATAGCGCAATACTAGAGGCAC
AGCAAATTACCGCTGCGGCAAAGGTGGCTAAAGAAAATTATCTTAAATATGAGGGGGGGATCTACTCATCTGAGTGGTTC
TGGGCCAAGGCTTTATATGTTCTGCGCCATGATACCGAAGTAAGACAAGCGGCATACAGTTGGGTTGAGCACTGTGATTG
GATCACCGCGCTAATGACAGGCACAACTCACCCTAAGGTCTATAAGGCAGGGCGCTGTGCATCAGGGCATAAAGTCATGT
GGCACGCGTCATGGAATGGGTATCCACCGAATGAATTTTTTGTTGGTATTGATCCATTGCTCGATGGTTTGCGTGATCGC
TTACCCGTGGAAACCTGCACTTCAGATAAAGTCTGCGGTACTTTAACCCCTGAGTGGGCAGCCAATCTAGGATTATCGAC
CGATGTTATCGTGTCGTTCGGTGCGTTTGACTGCCATGCCGGTGCGGTTGGTGCCAATGTTAAAGCGGGCGTACTGACTA
AGGTGATGGGGACATCGACCTGCGATATTACCGTTGCCAGTTATGAAGACATTGGTGAGCGGTGTATTAAAGGCATTTGT
GGCCAAGTTGATGGTTCAGTGTTACCGGGGATGATTGGTCTTGAAGCAGGGCAGTCGGCCTTTGGCGATTTGTATGCTTG
GTTTAAGGATCTCACCCTTTGGCCCATTAAACAGATCAATACCTCTGCACTATTTGACGATGAGGTGAAAGCTAAACTTA
TTGCACAACTTGAAGATGAAACCTTAGCAAAACTCGGTGAGGCCGCGGCTAATCTTCCCGTCAGTGAAACAGGCATTGTC
GCGCTAGATTGGATTAACGGACGCCGTACTCCCGATGCCGATCAATCCGTTTCTATGGCGATCAGCGGCTTAACCATGGG
TAGCCATGCACCGCACGTCTTTAAAGCCTTAGTCGAGGCCAGTGCCTACGGAGCAAGGGCGATTATTGAACGCTTTAAGG
AGGAGGGGGTGCGGATAGACCATGTCGTGACCATTGGCGGCATCTCTAAAAAGTCTGATTTTATTATGCAAACCTGCGCG
GATGTGTGGAATTGTAATATTGACGTGCTGGAAAGTGAACAAAGCTGTGCATTAGGCGCCGCCATTTATGCCGCAACGGC
GGCGGGTATTTATCCCGATGTATTAAGCGCTCAAGCTGTGATGGCTTCAAATGTAGCTAAAACCTATCAGTCTAATCCCA
TCAATGCAGAAAAATACCAAATGCTTTATCAAGCGTATCTAGCCCTAGGCCATTATGTTGATGGAGCGAAATAA

Upstream 100 bases:

>100_bases
ATTGTAATACCATTAAGCTATAGTAGTATTGTAGTACTAAATGTTTTGATGTCATCTGCACTCACTTGGTTAGGGCAGAG
TTCAATGTACGGGGATGCTA

Downstream 100 bases:

>100_bases
TATGTCATTTATAGAACTTAAACGCGAAGTTTATGAAGCCAATATGGAGCTCGAAAAGCGTCATTTAGTGACCTATACCT
TTGGCAATGTGTCACAAATT

Product: ribulokinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 557; Mature: 556

Protein sequence:

>557_residues
MANVLGSYALGLDYGSDSVRALLVDTLTGVEVATNVVYYPRWKKGLFCDPAKNQFRQHPLDYIESLIDVVQGLWTKAPPG
AAEKVCGLSVDTTGSTPIAVDESGMALALKDEFANNPNAMFLLWKDHSAILEAQQITAAAKVAKENYLKYEGGIYSSEWF
WAKALYVLRHDTEVRQAAYSWVEHCDWITALMTGTTHPKVYKAGRCASGHKVMWHASWNGYPPNEFFVGIDPLLDGLRDR
LPVETCTSDKVCGTLTPEWAANLGLSTDVIVSFGAFDCHAGAVGANVKAGVLTKVMGTSTCDITVASYEDIGERCIKGIC
GQVDGSVLPGMIGLEAGQSAFGDLYAWFKDLTLWPIKQINTSALFDDEVKAKLIAQLEDETLAKLGEAAANLPVSETGIV
ALDWINGRRTPDADQSVSMAISGLTMGSHAPHVFKALVEASAYGARAIIERFKEEGVRIDHVVTIGGISKKSDFIMQTCA
DVWNCNIDVLESEQSCALGAAIYAATAAGIYPDVLSAQAVMASNVAKTYQSNPINAEKYQMLYQAYLALGHYVDGAK

Sequences:

>Translated_557_residues
MANVLGSYALGLDYGSDSVRALLVDTLTGVEVATNVVYYPRWKKGLFCDPAKNQFRQHPLDYIESLIDVVQGLWTKAPPG
AAEKVCGLSVDTTGSTPIAVDESGMALALKDEFANNPNAMFLLWKDHSAILEAQQITAAAKVAKENYLKYEGGIYSSEWF
WAKALYVLRHDTEVRQAAYSWVEHCDWITALMTGTTHPKVYKAGRCASGHKVMWHASWNGYPPNEFFVGIDPLLDGLRDR
LPVETCTSDKVCGTLTPEWAANLGLSTDVIVSFGAFDCHAGAVGANVKAGVLTKVMGTSTCDITVASYEDIGERCIKGIC
GQVDGSVLPGMIGLEAGQSAFGDLYAWFKDLTLWPIKQINTSALFDDEVKAKLIAQLEDETLAKLGEAAANLPVSETGIV
ALDWINGRRTPDADQSVSMAISGLTMGSHAPHVFKALVEASAYGARAIIERFKEEGVRIDHVVTIGGISKKSDFIMQTCA
DVWNCNIDVLESEQSCALGAAIYAATAAGIYPDVLSAQAVMASNVAKTYQSNPINAEKYQMLYQAYLALGHYVDGAK
>Mature_556_residues
ANVLGSYALGLDYGSDSVRALLVDTLTGVEVATNVVYYPRWKKGLFCDPAKNQFRQHPLDYIESLIDVVQGLWTKAPPGA
AEKVCGLSVDTTGSTPIAVDESGMALALKDEFANNPNAMFLLWKDHSAILEAQQITAAAKVAKENYLKYEGGIYSSEWFW
AKALYVLRHDTEVRQAAYSWVEHCDWITALMTGTTHPKVYKAGRCASGHKVMWHASWNGYPPNEFFVGIDPLLDGLRDRL
PVETCTSDKVCGTLTPEWAANLGLSTDVIVSFGAFDCHAGAVGANVKAGVLTKVMGTSTCDITVASYEDIGERCIKGICG
QVDGSVLPGMIGLEAGQSAFGDLYAWFKDLTLWPIKQINTSALFDDEVKAKLIAQLEDETLAKLGEAAANLPVSETGIVA
LDWINGRRTPDADQSVSMAISGLTMGSHAPHVFKALVEASAYGARAIIERFKEEGVRIDHVVTIGGISKKSDFIMQTCAD
VWNCNIDVLESEQSCALGAAIYAATAAGIYPDVLSAQAVMASNVAKTYQSNPINAEKYQMLYQAYLALGHYVDGAK

Specific function: Unknown

COG id: COG1069

COG function: function code C; Ribulose kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulokinase family [H]

Homologues:

Organism=Homo sapiens, GI164663828, Length=568, Percent_Identity=25.7042253521127, Blast_Score=99, Evalue=9e-21,
Organism=Escherichia coli, GI1786249, Length=540, Percent_Identity=51.1111111111111, Blast_Score=546, Evalue=1e-156,
Organism=Drosophila melanogaster, GI24657106, Length=580, Percent_Identity=26.3793103448276, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24657102, Length=580, Percent_Identity=26.3793103448276, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI21356323, Length=455, Percent_Identity=27.4725274725275, Blast_Score=87, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018484
- InterPro:   IPR005929 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.16 [H]

Molecular weight: Translated: 60160; Mature: 60029

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANVLGSYALGLDYGSDSVRALLVDTLTGVEVATNVVYYPRWKKGLFCDPAKNQFRQHPL
CCCCCCCCEEEECCCCCHHHHHHHHHHCCHHHHHCEEEECCCCCCCCCCHHHHHHHCCCH
DYIESLIDVVQGLWTKAPPGAAEKVCGLSVDTTGSTPIAVDESGMALALKDEFANNPNAM
HHHHHHHHHHHHHHCCCCCCHHHHHCCCEECCCCCCCEEECCCCCEEEEEHHHCCCCCEE
FLLWKDHSAILEAQQITAAAKVAKENYLKYEGGIYSSEWFWAKALYVLRHDTEVRQAAYS
EEEECCCHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHH
WVEHCDWITALMTGTTHPKVYKAGRCASGHKVMWHASWNGYPPNEFFVGIDPLLDGLRDR
HHHHHHHHHHHHCCCCCCCCEECCCCCCCCEEEEEECCCCCCCCCEEEEHHHHHHHHHHC
LPVETCTSDKVCGTLTPEWAANLGLSTDVIVSFGAFDCHAGAVGANVKAGVLTKVMGTST
CCCCCCCCCCCCCCCCHHHHHHCCCCHHHEEEECCCCCCCCCCCCCCHHHHHHHHHCCCC
CDITVASYEDIGERCIKGICGQVDGSVLPGMIGLEAGQSAFGDLYAWFKDLTLWPIKQIN
CEEEEECHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCHHHCC
TSALFDDEVKAKLIAQLEDETLAKLGEAAANLPVSETGIVALDWINGRRTPDADQSVSMA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHH
ISGLTMGSHAPHVFKALVEASAYGARAIIERFKEEGVRIDHVVTIGGISKKSDFIMQTCA
EECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHH
DVWNCNIDVLESEQSCALGAAIYAATAAGIYPDVLSAQAVMASNVAKTYQSNPINAEKYQ
HHHCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
MLYQAYLALGHYVDGAK
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ANVLGSYALGLDYGSDSVRALLVDTLTGVEVATNVVYYPRWKKGLFCDPAKNQFRQHPL
CCCCCCCEEEECCCCCHHHHHHHHHHCCHHHHHCEEEECCCCCCCCCCHHHHHHHCCCH
DYIESLIDVVQGLWTKAPPGAAEKVCGLSVDTTGSTPIAVDESGMALALKDEFANNPNAM
HHHHHHHHHHHHHHCCCCCCHHHHHCCCEECCCCCCCEEECCCCCEEEEEHHHCCCCCEE
FLLWKDHSAILEAQQITAAAKVAKENYLKYEGGIYSSEWFWAKALYVLRHDTEVRQAAYS
EEEECCCHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHH
WVEHCDWITALMTGTTHPKVYKAGRCASGHKVMWHASWNGYPPNEFFVGIDPLLDGLRDR
HHHHHHHHHHHHCCCCCCCCEECCCCCCCCEEEEEECCCCCCCCCEEEEHHHHHHHHHHC
LPVETCTSDKVCGTLTPEWAANLGLSTDVIVSFGAFDCHAGAVGANVKAGVLTKVMGTST
CCCCCCCCCCCCCCCCHHHHHHCCCCHHHEEEECCCCCCCCCCCCCCHHHHHHHHHCCCC
CDITVASYEDIGERCIKGICGQVDGSVLPGMIGLEAGQSAFGDLYAWFKDLTLWPIKQIN
CEEEEECHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCHHHCC
TSALFDDEVKAKLIAQLEDETLAKLGEAAANLPVSETGIVALDWINGRRTPDADQSVSMA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHH
ISGLTMGSHAPHVFKALVEASAYGARAIIERFKEEGVRIDHVVTIGGISKKSDFIMQTCA
EECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHH
DVWNCNIDVLESEQSCALGAAIYAATAAGIYPDVLSAQAVMASNVAKTYQSNPINAEKYQ
HHHCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
MLYQAYLALGHYVDGAK
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA