| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is opgH [H]
Identifier: 120598747
GI number: 120598747
Start: 2230267
End: 2232450
Strand: Direct
Name: opgH [H]
Synonym: Sputw3181_1932
Alternate gene names: 120598747
Gene position: 2230267-2232450 (Clockwise)
Preceding gene: 120598746
Following gene: 120598750
Centisome position: 47.37
GC content: 47.12
Gene sequence:
>2184_bases ATGACTGTATCCGAGAATTCGGTACTCGAGACTGAAGTGCTCGTGGGCGGTAGTGCCATGCCAAATGAAAGGCCTGGCGC TATGGAGCCACAAAGTTTAACTGAAATGCCAGAGGGTTTTCCTCGCCGCAGTACTGTGGCTAATGGTGTTCGTTCACGTT CTTCTAGGCGTTTCTTTGTTGTTGGTGGTGCGCTGTTACTTTCCTCATTTGCAATTTATGAAATGGGTGCAGTATTCAGT ATCGGTGGGATCACGCCTCTGGAATACTTGGTGCTGTTGCTTTTTGCGATCAACTTCTGTTGGATTGCGCTGGCATTTTG CAGTGGTATTGCTGGTTTTTTAATTTTATTGAGAAAACCCAAAGCAAAAGATTTGGAAGTGACCGAGTTACATACTCGCA CTGCGATTCTAATGCCCACCTATAATGAATCCCCTGATCGGGTGTTTTCTGCCGTGTCTGTGATGGCTGAAGCCTTATCA CAGACAGGGCATGGTCATGCCTTCGATTGGTTTATTTTAAGTGATACAACCGATCCAGAAATTGCACTGTTAGAAGAACA GGCATTTTTGGTGTTGCGCCAAGAGACTCATAAACATTCCCGTGTATATTACCGTCGCCGTCGTAAAAACGTGGCTCGTA AAGCGGGTAATGTCGCGGACTTTTGTCGCCGCTGGGGCTCGCGTTATGATCACTTATTAGTGCTCGATGCGGATAGCTTA ATGGAGTCTTCGACCATCACAGGTCTTGCCCAGCGAATGCAGGCGGATCCTGATGCTGGGCTTATCCAAACCATACCTTC GCTTATCAATGGTACGACCTTGATGGCTCGTTTGCAGCAATTTGCGGCGCGTATTTATGGTCCTGTAATTGGTACTGGTT TAGGTTGGTGGGTACAAAAAGAAGGGAACTTCTGGGGCCACAATGCGATTATTCGCACCGAAGCATTTATGGGGGCAGCG GGCTTACCAAATCTGAAAGGTAAGCCGCCTTTTGGTGGTCACATACTAAGCCATGACTTTGTTGAAGCTGCACTTATCCG CCGCGCGGGTTGGAGTGTGGTGATAGCCTATGATTTGCCTGGTTCATATGAGGAATGTCCACCATCAATCGTTGATTTAG CGGTACGGGATCGTCGTTGGTGTCAGGGTAATTTACAGCATTCGCGTATCTTGCCGACCAAAGGTTTGCACTGGGTCAGC CGTTTACATTTGTTGACGGGAATTATGGCGTATTTATCATCGCCATTTTGGTTATTGTTGATCTTAACGGGCTTAATGCT TGCCTTGCAGGCGCACTTTATCAGACCTGAATATTTCACCGATCAGTTTTCTTTGTTCCCTACATGGCCAATCATGGACT CCGATAGGGCATTGAGATTATTTTACATCACTATGGGTGTACTGTTTGGGCCCAAAATATTTGGGGTATTACTGCTACTC AAAGATGGTCAGTTTGCGCGCAGTGTGGGCGGCCGTATCAAAGCCATTTTCAGTGTGTTGTTTGAAGTTGTGCTTTCCGC ATTAATCGCACCTATTATGATGTTTATTCACTGTGGTGCTGTGATGTCCATTCTGATGGGGCGTGATAGCGGCTGGTCGC CTCAGCGACGCGATGATGGCAGTATGCCTTGGTTAACGCTTATTTATCGTCACCGTTGGCATATGCTCGCAGGGGTGATG TTAGGTTATGCCGCCATTTTGGACTCATTAACTTTGCTTGCGTGGATGAGCCCAGCCCTGATTGGTTTATGGTTTGCAGT GCCTATCTCGGCTTGGACAGGGTCAGTCAAAATTGGTGAAGTGTTTAAGCGAGCGGGTATTTTAGCTACGCCAGAAGAAC GTAGTCCTGCGGCAATTTGTTTGCAGGCTCAGGATGCGCGTGCAGCCTATCAAGCACATATCTCTAAACCTTGGACATTA GCACAGTTATTGAAAGATCCAGCGTTAATGGAGTTGCATTTAGCAATGGTGGATAAACAACCACTGCGTGCGGCGGGAAC GCCTATTGAGCCGGTCGAAGCTATTGTGCATGTTAAGGTGCATGAAGCGCAGTGCCAAGAAAGTGCGATGGCATTATTTA ACCGTCAAGAAATGGCATTAGTCTTAGCCAATCCATTGATGCTTCGCAGCTTACAAAAGTTACCTGAGCAGTTTGTGGCA GAGGATTTAGTGTCTTTTTGCTAG
Upstream 100 bases:
>100_bases TGATTGAACTACGGGCTGAACTCAAATTTCCAACACCTCGTCAGGTTGAAACCTGGCTCTATCGCTGGACGCTTTAAGGT CCATGACGGAGCAAAATAAT
Downstream 100 bases:
>100_bases TAGTTCACGGTAACTCAATTTTAGGTCTCGAATAATTTTAGACTTCGAATGAGTTTAGCGAGTTAGAAGATAGGCTAAAA ATAAAATGCCACTGATTTAT
Product: glucosyltransferase MdoH
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 727; Mature: 726
Protein sequence:
>727_residues MTVSENSVLETEVLVGGSAMPNERPGAMEPQSLTEMPEGFPRRSTVANGVRSRSSRRFFVVGGALLLSSFAIYEMGAVFS IGGITPLEYLVLLLFAINFCWIALAFCSGIAGFLILLRKPKAKDLEVTELHTRTAILMPTYNESPDRVFSAVSVMAEALS QTGHGHAFDWFILSDTTDPEIALLEEQAFLVLRQETHKHSRVYYRRRRKNVARKAGNVADFCRRWGSRYDHLLVLDADSL MESSTITGLAQRMQADPDAGLIQTIPSLINGTTLMARLQQFAARIYGPVIGTGLGWWVQKEGNFWGHNAIIRTEAFMGAA GLPNLKGKPPFGGHILSHDFVEAALIRRAGWSVVIAYDLPGSYEECPPSIVDLAVRDRRWCQGNLQHSRILPTKGLHWVS RLHLLTGIMAYLSSPFWLLLILTGLMLALQAHFIRPEYFTDQFSLFPTWPIMDSDRALRLFYITMGVLFGPKIFGVLLLL KDGQFARSVGGRIKAIFSVLFEVVLSALIAPIMMFIHCGAVMSILMGRDSGWSPQRRDDGSMPWLTLIYRHRWHMLAGVM LGYAAILDSLTLLAWMSPALIGLWFAVPISAWTGSVKIGEVFKRAGILATPEERSPAAICLQAQDARAAYQAHISKPWTL AQLLKDPALMELHLAMVDKQPLRAAGTPIEPVEAIVHVKVHEAQCQESAMALFNRQEMALVLANPLMLRSLQKLPEQFVA EDLVSFC
Sequences:
>Translated_727_residues MTVSENSVLETEVLVGGSAMPNERPGAMEPQSLTEMPEGFPRRSTVANGVRSRSSRRFFVVGGALLLSSFAIYEMGAVFS IGGITPLEYLVLLLFAINFCWIALAFCSGIAGFLILLRKPKAKDLEVTELHTRTAILMPTYNESPDRVFSAVSVMAEALS QTGHGHAFDWFILSDTTDPEIALLEEQAFLVLRQETHKHSRVYYRRRRKNVARKAGNVADFCRRWGSRYDHLLVLDADSL MESSTITGLAQRMQADPDAGLIQTIPSLINGTTLMARLQQFAARIYGPVIGTGLGWWVQKEGNFWGHNAIIRTEAFMGAA GLPNLKGKPPFGGHILSHDFVEAALIRRAGWSVVIAYDLPGSYEECPPSIVDLAVRDRRWCQGNLQHSRILPTKGLHWVS RLHLLTGIMAYLSSPFWLLLILTGLMLALQAHFIRPEYFTDQFSLFPTWPIMDSDRALRLFYITMGVLFGPKIFGVLLLL KDGQFARSVGGRIKAIFSVLFEVVLSALIAPIMMFIHCGAVMSILMGRDSGWSPQRRDDGSMPWLTLIYRHRWHMLAGVM LGYAAILDSLTLLAWMSPALIGLWFAVPISAWTGSVKIGEVFKRAGILATPEERSPAAICLQAQDARAAYQAHISKPWTL AQLLKDPALMELHLAMVDKQPLRAAGTPIEPVEAIVHVKVHEAQCQESAMALFNRQEMALVLANPLMLRSLQKLPEQFVA EDLVSFC >Mature_726_residues TVSENSVLETEVLVGGSAMPNERPGAMEPQSLTEMPEGFPRRSTVANGVRSRSSRRFFVVGGALLLSSFAIYEMGAVFSI GGITPLEYLVLLLFAINFCWIALAFCSGIAGFLILLRKPKAKDLEVTELHTRTAILMPTYNESPDRVFSAVSVMAEALSQ TGHGHAFDWFILSDTTDPEIALLEEQAFLVLRQETHKHSRVYYRRRRKNVARKAGNVADFCRRWGSRYDHLLVLDADSLM ESSTITGLAQRMQADPDAGLIQTIPSLINGTTLMARLQQFAARIYGPVIGTGLGWWVQKEGNFWGHNAIIRTEAFMGAAG LPNLKGKPPFGGHILSHDFVEAALIRRAGWSVVIAYDLPGSYEECPPSIVDLAVRDRRWCQGNLQHSRILPTKGLHWVSR LHLLTGIMAYLSSPFWLLLILTGLMLALQAHFIRPEYFTDQFSLFPTWPIMDSDRALRLFYITMGVLFGPKIFGVLLLLK DGQFARSVGGRIKAIFSVLFEVVLSALIAPIMMFIHCGAVMSILMGRDSGWSPQRRDDGSMPWLTLIYRHRWHMLAGVML GYAAILDSLTLLAWMSPALIGLWFAVPISAWTGSVKIGEVFKRAGILATPEERSPAAICLQAQDARAAYQAHISKPWTLA QLLKDPALMELHLAMVDKQPLRAAGTPIEPVEAIVHVKVHEAQCQESAMALFNRQEMALVLANPLMLRSLQKLPEQFVAE DLVSFC
Specific function: Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) [H]
COG id: COG2943
COG function: function code M; Membrane glycosyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family. OpgH subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787287, Length=545, Percent_Identity=40.3669724770642, Blast_Score=409, Evalue=1e-115,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.4.1.- [C]
Molecular weight: Translated: 80800; Mature: 80668
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSENSVLETEVLVGGSAMPNERPGAMEPQSLTEMPEGFPRRSTVANGVRSRSSRRFFV CCCCCCCCEEEHEEECCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHCCCCEEEE VGGALLLSSFAIYEMGAVFSIGGITPLEYLVLLLFAINFCWIALAFCSGIAGFLILLRKP EEHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KAKDLEVTELHTRTAILMPTYNESPDRVFSAVSVMAEALSQTGHGHAFDWFILSDTTDPE CCCCCCCEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCC IALLEEQAFLVLRQETHKHSRVYYRRRRKNVARKAGNVADFCRRWGSRYDHLLVLDADSL EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEEHHHH MESSTITGLAQRMQADPDAGLIQTIPSLINGTTLMARLQQFAARIYGPVIGTGLGWWVQK HHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEE EGNFWGHNAIIRTEAFMGAAGLPNLKGKPPFGGHILSHDFVEAALIRRAGWSVVIAYDLP CCCCCCCCEEEEEHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCC GSYEECPPSIVDLAVRDRRWCQGNLQHSRILPTKGLHWVSRLHLLTGIMAYLSSPFWLLL CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH ILTGLMLALQAHFIRPEYFTDQFSLFPTWPIMDSDRALRLFYITMGVLFGPKIFGVLLLL HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KDGQFARSVGGRIKAIFSVLFEVVLSALIAPIMMFIHCGAVMSILMGRDSGWSPQRRDDG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC SMPWLTLIYRHRWHMLAGVMLGYAAILDSLTLLAWMSPALIGLWFAVPISAWTGSVKIGE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH VFKRAGILATPEERSPAAICLQAQDARAAYQAHISKPWTLAQLLKDPALMELHLAMVDKQ HHHHCCCCCCCCCCCCCEEEEECHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHCCC PLRAAGTPIEPVEAIVHVKVHEAQCQESAMALFNRQEMALVLANPLMLRSLQKLPEQFVA CHHHCCCCCCHHHHHHEEEEHHHHHHHHHHHHHCHHHHHHHHHCHHHHHHHHHHHHHHHH EDLVSFC HHHHHHC >Mature Secondary Structure TVSENSVLETEVLVGGSAMPNERPGAMEPQSLTEMPEGFPRRSTVANGVRSRSSRRFFV CCCCCCCEEEHEEECCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHCCCCEEEE VGGALLLSSFAIYEMGAVFSIGGITPLEYLVLLLFAINFCWIALAFCSGIAGFLILLRKP EEHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KAKDLEVTELHTRTAILMPTYNESPDRVFSAVSVMAEALSQTGHGHAFDWFILSDTTDPE CCCCCCCEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCC IALLEEQAFLVLRQETHKHSRVYYRRRRKNVARKAGNVADFCRRWGSRYDHLLVLDADSL EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEEHHHH MESSTITGLAQRMQADPDAGLIQTIPSLINGTTLMARLQQFAARIYGPVIGTGLGWWVQK HHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEE EGNFWGHNAIIRTEAFMGAAGLPNLKGKPPFGGHILSHDFVEAALIRRAGWSVVIAYDLP CCCCCCCCEEEEEHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCC GSYEECPPSIVDLAVRDRRWCQGNLQHSRILPTKGLHWVSRLHLLTGIMAYLSSPFWLLL CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH ILTGLMLALQAHFIRPEYFTDQFSLFPTWPIMDSDRALRLFYITMGVLFGPKIFGVLLLL HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KDGQFARSVGGRIKAIFSVLFEVVLSALIAPIMMFIHCGAVMSILMGRDSGWSPQRRDDG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC SMPWLTLIYRHRWHMLAGVMLGYAAILDSLTLLAWMSPALIGLWFAVPISAWTGSVKIGE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH VFKRAGILATPEERSPAAICLQAQDARAAYQAHISKPWTLAQLLKDPALMELHLAMVDKQ HHHHCCCCCCCCCCCCCEEEEECHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHCCC PLRAAGTPIEPVEAIVHVKVHEAQCQESAMALFNRQEMALVLANPLMLRSLQKLPEQFVA CHHHCCCCCCHHHHHHEEEEHHHHHHHHHHHHHCHHHHHHHHHCHHHHHHHHHHHHHHHH EDLVSFC HHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA