Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120598564

Identifier: 120598564

GI number: 120598564

Start: 2011041

End: 2011490

Strand: Direct

Name: 120598564

Synonym: Sputw3181_1747

Alternate gene names: NA

Gene position: 2011041-2011490 (Clockwise)

Preceding gene: 120598563

Following gene: 120598565

Centisome position: 42.71

GC content: 41.33

Gene sequence:

>450_bases
ATGAGCCAAAAACTCGCGATTATTATGCGTGGTTTGCCTGGAAGCGGTAAATCTTATTGGGTTGAGCAGTATATTGCCAA
CTTACCTTTGGATATGGCTTTTCGTCTGCGTCAATATGGACTTTTTTCAACCGATACATTTTTCTATCAGGGTAATGAAT
ATCGTTTTGATGCGAAAAAATTGCCTGAATACCATCAACGTAATTTAACCGCGTTTATCCAAGCTCTCGTATCGAATGAG
CCTATTGTTATCTGCGATAACACTAATCTTTGTCACTGGGAATATATGGCCTATGATGCCGTGGCAAAAGCGCTTGGCTA
TCAAGTACGCATTGTACTTGTGGGCGAGCCGTTGAATACTGAGCATCAACGATTATGTGCTGAGCGTAATCGTCATCATG
TTTCCCTTGCGCATATTCAACGTATGGCAACAGCATTTGATGCGTTTTAA

Upstream 100 bases:

>100_bases
AATTTCAATATCACCTTACAGGCAAAGCGGGTGATATAGTGCCTAGGCTTGTTGATACCATTTTGGCAGGTAAAGTGATT
GGTAGCGACTTGGTGACAAT

Downstream 100 bases:

>100_bases
TCGATATTGTAATGAATCATCCTATGATAGCGTTCTTCTTTTTGTCACCTATTCCTTTTAAGCTTGATCTTACAGGCAGT
TTATCCATTTTGACTCGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MSQKLAIIMRGLPGSGKSYWVEQYIANLPLDMAFRLRQYGLFSTDTFFYQGNEYRFDAKKLPEYHQRNLTAFIQALVSNE
PIVICDNTNLCHWEYMAYDAVAKALGYQVRIVLVGEPLNTEHQRLCAERNRHHVSLAHIQRMATAFDAF

Sequences:

>Translated_149_residues
MSQKLAIIMRGLPGSGKSYWVEQYIANLPLDMAFRLRQYGLFSTDTFFYQGNEYRFDAKKLPEYHQRNLTAFIQALVSNE
PIVICDNTNLCHWEYMAYDAVAKALGYQVRIVLVGEPLNTEHQRLCAERNRHHVSLAHIQRMATAFDAF
>Mature_148_residues
SQKLAIIMRGLPGSGKSYWVEQYIANLPLDMAFRLRQYGLFSTDTFFYQGNEYRFDAKKLPEYHQRNLTAFIQALVSNEP
IVICDNTNLCHWEYMAYDAVAKALGYQVRIVLVGEPLNTEHQRLCAERNRHHVSLAHIQRMATAFDAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI7656971, Length=145, Percent_Identity=33.1034482758621, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21357685, Length=144, Percent_Identity=31.9444444444444, Blast_Score=63, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17293; Mature: 17162

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQKLAIIMRGLPGSGKSYWVEQYIANLPLDMAFRLRQYGLFSTDTFFYQGNEYRFDAKK
CCCCEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEECCEEEECHHH
LPEYHQRNLTAFIQALVSNEPIVICDNTNLCHWEYMAYDAVAKALGYQVRIVLVGEPLNT
CCHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEHHHHHHHHHHHCCCEEEEEEEECCCCH
EHQRLCAERNRHHVSLAHIQRMATAFDAF
HHHHHHHHCCCCEEHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SQKLAIIMRGLPGSGKSYWVEQYIANLPLDMAFRLRQYGLFSTDTFFYQGNEYRFDAKK
CCCEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEECCEEEECHHH
LPEYHQRNLTAFIQALVSNEPIVICDNTNLCHWEYMAYDAVAKALGYQVRIVLVGEPLNT
CCHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEHHHHHHHHHHHCCCEEEEEEEECCCCH
EHQRLCAERNRHHVSLAHIQRMATAFDAF
HHHHHHHHCCCCEEHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA