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The map label for this gene is ybbN [H]

Identifier: 120598527

GI number: 120598527

Start: 1968176

End: 1969039

Strand: Direct

Name: ybbN [H]

Synonym: Sputw3181_1710

Alternate gene names: 120598527

Gene position: 1968176-1969039 (Clockwise)

Preceding gene: 120598526

Following gene: 120598528

Centisome position: 41.8

GC content: 43.17

Gene sequence:

>864_bases
ATGGATAATATCCTCGATCTGACAAAAGACAATATTCAGCAAGTGGTTGATGCCTCGATGCAACAGATCGTGGTGTTGGT
CTTTTGGGCACAATCTCAACCACAAAGTGTCACTATGGTGCAAACGTTAGAGCAGATCGCTTCGCAGCATTCGGGGCGTT
TTGTACTTGCCAAAGTGAATTGTGAAACCGAATTAGAAATTGCCAATTATTTTCGTATTCAAAGTTTGCCTACTACTCTC
GTGCTCGATAAAGGGCAACCTATTGATGGTTTTGCTGGCATACAGGAAGCAATGCAAGTGAATGCTATGCTTGATAAGCA
TCTGCCTCCCATGTGGCAATTGCAATTAGCCCAAGCGAAGGAATTGCTCACGTTAAGCCAAGTCACCCATGAGGACTTAG
CAACGGCAGTGATACTGCTAAAAGAAGCCCATAGTTCGTCTAATAAGGCAGGCGAGGTCAGTTTAGTGCTTGCCGATGTG
TATTTAATGCAGGGAGAATTAGCGTTAGCACAAACCTTATTGGAGCAGATTGGTCTTGCGGATCAAGATGGTTATTACCA
AAGTCTAAAAGCTAAGCTTGCACTGGCCTTGGATGCAGCAGATACCCCTGAAATTCGCGATTTACAGCAAAAGTTTGCGC
AAAATCCACAGGATTTAGTGTTATTACTCGAACTGAGTAAGGCGTTACACGCCGCACACCGTGATGAAGAGGCGTTAAGT
CTATTGTTTGGTGTGTTAGCTAAGGACCTAAATGCTGAGAATGGTACTGTAAAACAAGTGTTTATGGAATTACTTACCGC
ACTTGGTCAAGGTAACCCGCTTGCTAATCAATATCGCCGTAAGCTTTATACTTTACTTTATTAA

Upstream 100 bases:

>100_bases
AACGCGTGGCGAATGTTACCACAAAGGCATGTGTATCAAGGTGAGGACTAAAGCTTAATGATGGCGTCGGTTAGTCACCT
TTCGATATTAAGGAAATACC

Downstream 100 bases:

>100_bases
TCATCAAAATAGCCGATTCTCCGCAGTTTATTTGCACTTTCTGAGGCTAAAGTCGAAGCTAAAAGCCTTCTCAATGGCGG
CCAGATGTGCGAAGATCGCC

Product: thioredoxin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MDNILDLTKDNIQQVVDASMQQIVVLVFWAQSQPQSVTMVQTLEQIASQHSGRFVLAKVNCETELEIANYFRIQSLPTTL
VLDKGQPIDGFAGIQEAMQVNAMLDKHLPPMWQLQLAQAKELLTLSQVTHEDLATAVILLKEAHSSSNKAGEVSLVLADV
YLMQGELALAQTLLEQIGLADQDGYYQSLKAKLALALDAADTPEIRDLQQKFAQNPQDLVLLLELSKALHAAHRDEEALS
LLFGVLAKDLNAENGTVKQVFMELLTALGQGNPLANQYRRKLYTLLY

Sequences:

>Translated_287_residues
MDNILDLTKDNIQQVVDASMQQIVVLVFWAQSQPQSVTMVQTLEQIASQHSGRFVLAKVNCETELEIANYFRIQSLPTTL
VLDKGQPIDGFAGIQEAMQVNAMLDKHLPPMWQLQLAQAKELLTLSQVTHEDLATAVILLKEAHSSSNKAGEVSLVLADV
YLMQGELALAQTLLEQIGLADQDGYYQSLKAKLALALDAADTPEIRDLQQKFAQNPQDLVLLLELSKALHAAHRDEEALS
LLFGVLAKDLNAENGTVKQVFMELLTALGQGNPLANQYRRKLYTLLY
>Mature_287_residues
MDNILDLTKDNIQQVVDASMQQIVVLVFWAQSQPQSVTMVQTLEQIASQHSGRFVLAKVNCETELEIANYFRIQSLPTTL
VLDKGQPIDGFAGIQEAMQVNAMLDKHLPPMWQLQLAQAKELLTLSQVTHEDLATAVILLKEAHSSSNKAGEVSLVLADV
YLMQGELALAQTLLEQIGLADQDGYYQSLKAKLALALDAADTPEIRDLQQKFAQNPQDLVLLLELSKALHAAHRDEEALS
LLFGVLAKDLNAENGTVKQVFMELLTALGQGNPLANQYRRKLYTLLY

Specific function: Unknown

COG id: COG3118

COG function: function code O; Thioredoxin domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI87081747, Length=287, Percent_Identity=42.1602787456446, Blast_Score=224, Evalue=7e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR013766
- InterPro:   IPR012335
- InterPro:   IPR011990 [H]

Pfam domain/function: PF00085 Thioredoxin [H]

EC number: NA

Molecular weight: Translated: 31777; Mature: 31777

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNILDLTKDNIQQVVDASMQQIVVLVFWAQSQPQSVTMVQTLEQIASQHSGRFVLAKVN
CCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEC
CETELEIANYFRIQSLPTTLVLDKGQPIDGFAGIQEAMQVNAMLDKHLPPMWQLQLAQAK
CCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
ELLTLSQVTHEDLATAVILLKEAHSSSNKAGEVSLVLADVYLMQGELALAQTLLEQIGLA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHCHHHHHHHHHHHCCCC
DQDGYYQSLKAKLALALDAADTPEIRDLQQKFAQNPQDLVLLLELSKALHAAHRDEEALS
CCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHH
LLFGVLAKDLNAENGTVKQVFMELLTALGQGNPLANQYRRKLYTLLY
HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MDNILDLTKDNIQQVVDASMQQIVVLVFWAQSQPQSVTMVQTLEQIASQHSGRFVLAKVN
CCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEC
CETELEIANYFRIQSLPTTLVLDKGQPIDGFAGIQEAMQVNAMLDKHLPPMWQLQLAQAK
CCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
ELLTLSQVTHEDLATAVILLKEAHSSSNKAGEVSLVLADVYLMQGELALAQTLLEQIGLA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHCHHHHHHHHHHHCCCC
DQDGYYQSLKAKLALALDAADTPEIRDLQQKFAQNPQDLVLLLELSKALHAAHRDEEALS
CCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHH
LLFGVLAKDLNAENGTVKQVFMELLTALGQGNPLANQYRRKLYTLLY
HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]