| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is htpG [H]
Identifier: 120598526
GI number: 120598526
Start: 1966018
End: 1967931
Strand: Direct
Name: htpG [H]
Synonym: Sputw3181_1709
Alternate gene names: 120598526
Gene position: 1966018-1967931 (Clockwise)
Preceding gene: 120598525
Following gene: 120598527
Centisome position: 41.76
GC content: 47.13
Gene sequence:
>1914_bases ATGTCACAACAAGAAACTCATGGTTTTCAAACTGAAGTCAAACAGCTGTTGCATTTGATGATCCATTCTTTGTACTCCAA CAAAGAAATTTTCTTGCGTGAACTGGTCTCCAACGCTGCGGATGCGGCCGATAAGCTGCGTTACCTCGCGTTGACCAATG ACGCATTATATGAAGGTGACGGTGAGCTGCGTGTGCGCATTAGTGCAGACAAAGATAAAGGCACAGTGACCATCGAAGAT AATGGTGTGGGTATGACCCGTGATGGCGTGATTGAGCATTTAGGCACTATTGCAAAATCAGGCACCGCCGAATTCTTCAA AAACCTCTCTGGCGAAGCCTCAAAGGACTCGCAGTTAATTGGTCAGTTCGGTGTGGGTTTCTACTCCGCCTTTATAGTGG CGAAAAAAGTCACCGTTCGCACCCGTGCCGCCGGCCATAAGGCCGATGAAGCAGTATTGTGGGAATCGGAAGGTGAGGGT AGTTTCACCGTTGAAACCATCACTAAGGCGAGCCGTGGTACTGAAATCACCCTGCACCTACGTGATGAAGAAAAAGAGTT TGCCGATGATTGGCGCCTACGTTCTATCATCACTAAATACTCAGATCATATCTCTGTGCCCGTAGAGATGTGGCAGGAAG GCACACCAGAGCGCGACGGTCCAGACGGCGAAAAAATTCCTGCAACCGAAGGTTACTGGAAAGTTATGAACAAGGCGACA GCCCTGTGGATGCGCAATAAGTCTGAGATTAGCGACGAAGAATATCAAGAATTTTATAAGCACATTTCCCATGACTACAC AGACGCATTACTGTGGAGCCACAACCGCGTAGAAGGTAAGCAAGAATATACTAACCTCTTGTATATTCCTTCAAAAGCGC CATGGGATCTGTGGAATCGTGACCGTAAACACGGTCTAAAACTGTTTGTGCAACGTGTGTTTATTATGGATGACGCAGAG CAATTTATGCCATCTTACCTGCGTTTTGTGCAGGGCTTAATTGACTCAAACGATCTGCCGCTGAACGTCTCCCGCGAAAT TTTGCAGGACAATCACATTACCAAAGCGATGCGCACTGGTATCACTAAGCGCGTGCTGGGTATGTTGGAGAAACTGGCGA AAGACGATGCGGAAAAATATCAACAGTTCTGGGCTGAATTTGGCCAAGTGTTAAAAGAAGGACCCGCAGAAGATTTCGCA AACCGTGAACGTATTGCTGGCTTACTGCGTTTTGCTTCAACCCACACGGGTAGCGCTGCGCCGACTGTGTCACTCGATGA CTACATCAGCCGTATGAAAGAAGGCCAAACGAAGATTTACTATATTGTTGCCGACAGCTATGACGCCGCCGCTAACAGTC CACATTTAGAGTTATTGCGCAAAAAAGACATTGAAGTATTACTGATGTCTGAGCGTATCGATGAGTGGTTAATCAACCAC TTAACAGAGTACAAAGAAAAACAATTGCACTCAGTGACTCGTGGTGAACTTGAACTTGGCGAACTGGAAGATGCAGCGGA GAAGGAAGCACAGGAGAAACTTGCCGAGGAGTCTGCTCCTCTTATCGAGCGTATTAAAGCTGCACTAGGTACAAAGGTTG CCGATGTGAAAGTGACCTCTCGTTTAACTGACACCCCAGCCTGTGTGGTCACGGGTGAAGGCGAAATGTCGACGCAAATG ATCAAGCTGATGCAAGCTGCCGGTCAACCCGTGCCGGAAGTGAAGCCAACATTTGAGGTAAACCCTGCGCACCCATTAGT GTCGCGCTTAAATGATCTTCAAGATGAAACCGCTTTTGCGGATTGGTCAAACTTACTGTTACAACAGGCGCAATTATCTG AAAAAGGTAGCCTTGCGGATCCATCGGCCTTTATTAAGCTGATGAACCAAATGTTACTGGCAAATATGAAGTAA
Upstream 100 bases:
>100_bases TCGTTTTATTCCTTGCCCTTGAAAAGCAAATTTGCAGCCCCATTTAAGTAAGCACTGAGCGTTACTTTTACCAAATTGCG TAACAAATAAGGAAAATTTC
Downstream 100 bases:
>100_bases AAAATTTGGGGCCCATGGACGTTATTGCTCAAATGGGCCCCAACTATTTTTGAGCTTATCTCAGTTTTAACTTAGTTATG TTTTAGCTTAAGCATGTTAA
Product: heat shock protein 90
Products: NA
Alternate protein names: Heat shock protein htpG; High temperature protein G [H]
Number of amino acids: Translated: 637; Mature: 636
Protein sequence:
>637_residues MSQQETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTNDALYEGDGELRVRISADKDKGTVTIED NGVGMTRDGVIEHLGTIAKSGTAEFFKNLSGEASKDSQLIGQFGVGFYSAFIVAKKVTVRTRAAGHKADEAVLWESEGEG SFTVETITKASRGTEITLHLRDEEKEFADDWRLRSIITKYSDHISVPVEMWQEGTPERDGPDGEKIPATEGYWKVMNKAT ALWMRNKSEISDEEYQEFYKHISHDYTDALLWSHNRVEGKQEYTNLLYIPSKAPWDLWNRDRKHGLKLFVQRVFIMDDAE QFMPSYLRFVQGLIDSNDLPLNVSREILQDNHITKAMRTGITKRVLGMLEKLAKDDAEKYQQFWAEFGQVLKEGPAEDFA NRERIAGLLRFASTHTGSAAPTVSLDDYISRMKEGQTKIYYIVADSYDAAANSPHLELLRKKDIEVLLMSERIDEWLINH LTEYKEKQLHSVTRGELELGELEDAAEKEAQEKLAEESAPLIERIKAALGTKVADVKVTSRLTDTPACVVTGEGEMSTQM IKLMQAAGQPVPEVKPTFEVNPAHPLVSRLNDLQDETAFADWSNLLLQQAQLSEKGSLADPSAFIKLMNQMLLANMK
Sequences:
>Translated_637_residues MSQQETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTNDALYEGDGELRVRISADKDKGTVTIED NGVGMTRDGVIEHLGTIAKSGTAEFFKNLSGEASKDSQLIGQFGVGFYSAFIVAKKVTVRTRAAGHKADEAVLWESEGEG SFTVETITKASRGTEITLHLRDEEKEFADDWRLRSIITKYSDHISVPVEMWQEGTPERDGPDGEKIPATEGYWKVMNKAT ALWMRNKSEISDEEYQEFYKHISHDYTDALLWSHNRVEGKQEYTNLLYIPSKAPWDLWNRDRKHGLKLFVQRVFIMDDAE QFMPSYLRFVQGLIDSNDLPLNVSREILQDNHITKAMRTGITKRVLGMLEKLAKDDAEKYQQFWAEFGQVLKEGPAEDFA NRERIAGLLRFASTHTGSAAPTVSLDDYISRMKEGQTKIYYIVADSYDAAANSPHLELLRKKDIEVLLMSERIDEWLINH LTEYKEKQLHSVTRGELELGELEDAAEKEAQEKLAEESAPLIERIKAALGTKVADVKVTSRLTDTPACVVTGEGEMSTQM IKLMQAAGQPVPEVKPTFEVNPAHPLVSRLNDLQDETAFADWSNLLLQQAQLSEKGSLADPSAFIKLMNQMLLANMK >Mature_636_residues SQQETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTNDALYEGDGELRVRISADKDKGTVTIEDN GVGMTRDGVIEHLGTIAKSGTAEFFKNLSGEASKDSQLIGQFGVGFYSAFIVAKKVTVRTRAAGHKADEAVLWESEGEGS FTVETITKASRGTEITLHLRDEEKEFADDWRLRSIITKYSDHISVPVEMWQEGTPERDGPDGEKIPATEGYWKVMNKATA LWMRNKSEISDEEYQEFYKHISHDYTDALLWSHNRVEGKQEYTNLLYIPSKAPWDLWNRDRKHGLKLFVQRVFIMDDAEQ FMPSYLRFVQGLIDSNDLPLNVSREILQDNHITKAMRTGITKRVLGMLEKLAKDDAEKYQQFWAEFGQVLKEGPAEDFAN RERIAGLLRFASTHTGSAAPTVSLDDYISRMKEGQTKIYYIVADSYDAAANSPHLELLRKKDIEVLLMSERIDEWLINHL TEYKEKQLHSVTRGELELGELEDAAEKEAQEKLAEESAPLIERIKAALGTKVADVKVTSRLTDTPACVVTGEGEMSTQMI KLMQAAGQPVPEVKPTFEVNPAHPLVSRLNDLQDETAFADWSNLLLQQAQLSEKGSLADPSAFIKLMNQMLLANMK
Specific function: Molecular chaperone. Has ATPase activity [H]
COG id: COG0326
COG function: function code O; Molecular chaperone, HSP90 family
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 90 family [H]
Homologues:
Organism=Homo sapiens, GI20149594, Length=681, Percent_Identity=37.7386196769457, Blast_Score=421, Evalue=1e-117, Organism=Homo sapiens, GI4507677, Length=686, Percent_Identity=37.4635568513119, Blast_Score=418, Evalue=1e-116, Organism=Homo sapiens, GI155722983, Length=638, Percent_Identity=34.012539184953, Blast_Score=369, Evalue=1e-102, Organism=Homo sapiens, GI154146191, Length=408, Percent_Identity=38.4803921568627, Blast_Score=269, Evalue=6e-72, Organism=Homo sapiens, GI153792590, Length=408, Percent_Identity=38.4803921568627, Blast_Score=268, Evalue=2e-71, Organism=Escherichia coli, GI1786679, Length=635, Percent_Identity=68.9763779527559, Blast_Score=894, Evalue=0.0, Organism=Caenorhabditis elegans, GI17559162, Length=668, Percent_Identity=38.622754491018, Blast_Score=441, Evalue=1e-124, Organism=Caenorhabditis elegans, GI17542208, Length=665, Percent_Identity=37.593984962406, Blast_Score=410, Evalue=1e-114, Organism=Caenorhabditis elegans, GI115535205, Length=647, Percent_Identity=31.3755795981453, Blast_Score=317, Evalue=1e-86, Organism=Caenorhabditis elegans, GI115535167, Length=445, Percent_Identity=34.8314606741573, Blast_Score=263, Evalue=2e-70, Organism=Saccharomyces cerevisiae, GI6323840, Length=680, Percent_Identity=37.7941176470588, Blast_Score=444, Evalue=1e-125, Organism=Saccharomyces cerevisiae, GI6325016, Length=684, Percent_Identity=37.280701754386, Blast_Score=439, Evalue=1e-124, Organism=Drosophila melanogaster, GI17647529, Length=684, Percent_Identity=38.1578947368421, Blast_Score=461, Evalue=1e-130, Organism=Drosophila melanogaster, GI21357739, Length=677, Percent_Identity=36.4844903988183, Blast_Score=406, Evalue=1e-113, Organism=Drosophila melanogaster, GI24586016, Length=647, Percent_Identity=34.4667697063369, Blast_Score=362, Evalue=1e-100,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 2419 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR019805 - InterPro: IPR001404 - InterPro: IPR020575 - InterPro: IPR020568 [H]
Pfam domain/function: PF02518 HATPase_c; PF00183 HSP90 [H]
EC number: NA
Molecular weight: Translated: 71944; Mature: 71813
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS00298 HSP90
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQQETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTNDALYEGD CCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEECCCEEECC GELRVRISADKDKGTVTIEDNGVGMTRDGVIEHLGTIAKSGTAEFFKNLSGEASKDSQLI CCEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHH GQFGVGFYSAFIVAKKVTVRTRAAGHKADEAVLWESEGEGSFTVETITKASRGTEITLHL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEHHHHHHCCCCCEEEEEE RDEEKEFADDWRLRSIITKYSDHISVPVEMWQEGTPERDGPDGEKIPATEGYWKVMNKAT CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH ALWMRNKSEISDEEYQEFYKHISHDYTDALLWSHNRVEGKQEYTNLLYIPSKAPWDLWNR HHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHCCEEEECCCCCCCHHHH DRKHGLKLFVQRVFIMDDAEQFMPSYLRFVQGLIDSNDLPLNVSREILQDNHITKAMRTG HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHH ITKRVLGMLEKLAKDDAEKYQQFWAEFGQVLKEGPAEDFANRERIAGLLRFASTHTGSAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCC PTVSLDDYISRMKEGQTKIYYIVADSYDAAANSPHLELLRKKDIEVLLMSERIDEWLINH CCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHH LTEYKEKQLHSVTRGELELGELEDAAEKEAQEKLAEESAPLIERIKAALGTKVADVKVTS HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHEEEEHH RLTDTPACVVTGEGEMSTQMIKLMQAAGQPVPEVKPTFEVNPAHPLVSRLNDLQDETAFA HCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHH DWSNLLLQQAQLSEKGSLADPSAFIKLMNQMLLANMK HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure SQQETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTNDALYEGD CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEECCCEEECC GELRVRISADKDKGTVTIEDNGVGMTRDGVIEHLGTIAKSGTAEFFKNLSGEASKDSQLI CCEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHH GQFGVGFYSAFIVAKKVTVRTRAAGHKADEAVLWESEGEGSFTVETITKASRGTEITLHL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEHHHHHHCCCCCEEEEEE RDEEKEFADDWRLRSIITKYSDHISVPVEMWQEGTPERDGPDGEKIPATEGYWKVMNKAT CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH ALWMRNKSEISDEEYQEFYKHISHDYTDALLWSHNRVEGKQEYTNLLYIPSKAPWDLWNR HHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHCCEEEECCCCCCCHHHH DRKHGLKLFVQRVFIMDDAEQFMPSYLRFVQGLIDSNDLPLNVSREILQDNHITKAMRTG HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHH ITKRVLGMLEKLAKDDAEKYQQFWAEFGQVLKEGPAEDFANRERIAGLLRFASTHTGSAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCC PTVSLDDYISRMKEGQTKIYYIVADSYDAAANSPHLELLRKKDIEVLLMSERIDEWLINH CCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHH LTEYKEKQLHSVTRGELELGELEDAAEKEAQEKLAEESAPLIERIKAALGTKVADVKVTS HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHEEEEHH RLTDTPACVVTGEGEMSTQMIKLMQAAGQPVPEVKPTFEVNPAHPLVSRLNDLQDETAFA HCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHH DWSNLLLQQAQLSEKGSLADPSAFIKLMNQMLLANMK HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA