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The map label for this gene is recR

Identifier: 120598525

GI number: 120598525

Start: 1965120

End: 1965719

Strand: Direct

Name: recR

Synonym: Sputw3181_1708

Alternate gene names: 120598525

Gene position: 1965120-1965719 (Clockwise)

Preceding gene: 120598524

Following gene: 120598526

Centisome position: 41.74

GC content: 49.5

Gene sequence:

>600_bases
ATGAAATTCAGTCCACTGCTTGACGAGTTAATTCAATCCCTGCGTTGTTTACCTGGGGTCGGACCTAAATCGGCACAACG
TATGGCGTTTCAATTGCTTGAACGGGACAGAAAAGCAGGGCTTAAATTAGCCAGTGCACTGTCCAGTGCCATGAGTGATG
TTGGCCACTGTCAGTCTTGCCGAACTTATACTGAAGAAACGCTGTGCCCCATTTGTGCTAGCCATAAACGCGGCTCATCT
TCCACCATTTGTGTAGTGGAAACGCCTGCCGATGTGTTGGCTATTGAGGCGGGTGGACATTTCACAGGCCGTTATTTTGT
ACTACTTGGCCATTTATCTCCCCTTGACGGTGTTGGCCCTGAAGAATTAGGGCTGGCTTTACTCGAGCGTCATTTAGCCT
CGGGGGATGTCAGTGAGTTGATTCTAGCAACCAACCCAACGGTAGAAGGTGAAGCGACAGCGCATTTTATTGCCGATATG
GCAAGACGTCATAAGGTGATGATCAGCCGTATTGCCCACGGTGTTCCCGTTGGCGGTGAGCTTGAATATGTGGATAGCAC
CACGTTGGCACTCTCATTTAATGGGCGTTTGCCGTTGTAA

Upstream 100 bases:

>100_bases
ACGTCGAATCGAAGAGAATCAAAAAGCTAAAATGGCTGAAGTGACTGGCGGTATGCAATTACCACCAGGCATGAAAATGC
CGTTTTAATTGAGATAAGCA

Downstream 100 bases:

>100_bases
ATCTTGCCGATAATGGATTGTTAATCAAGTTGATAGGACTCGCTTTTGCGGGTCTTACTGTTACTAGATATTGTTTCTAG
ATATTGTTTCTAGATATTGT

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MKFSPLLDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGLKLASALSSAMSDVGHCQSCRTYTEETLCPICASHKRGSS
STICVVETPADVLAIEAGGHFTGRYFVLLGHLSPLDGVGPEELGLALLERHLASGDVSELILATNPTVEGEATAHFIADM
ARRHKVMISRIAHGVPVGGELEYVDSTTLALSFNGRLPL

Sequences:

>Translated_199_residues
MKFSPLLDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGLKLASALSSAMSDVGHCQSCRTYTEETLCPICASHKRGSS
STICVVETPADVLAIEAGGHFTGRYFVLLGHLSPLDGVGPEELGLALLERHLASGDVSELILATNPTVEGEATAHFIADM
ARRHKVMISRIAHGVPVGGELEYVDSTTLALSFNGRLPL
>Mature_199_residues
MKFSPLLDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGLKLASALSSAMSDVGHCQSCRTYTEETLCPICASHKRGSS
STICVVETPADVLAIEAGGHFTGRYFVLLGHLSPLDGVGPEELGLALLERHLASGDVSELILATNPTVEGEATAHFIADM
ARRHKVMISRIAHGVPVGGELEYVDSTTLALSFNGRLPL

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO [H]

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

Organism=Escherichia coli, GI1786678, Length=196, Percent_Identity=62.7551020408163, Blast_Score=267, Evalue=3e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967 [H]

Pfam domain/function: PF02132 RecR; PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 21266; Mature: 21266

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFSPLLDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGLKLASALSSAMSDVGHCQSC
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTYTEETLCPICASHKRGSSSTICVVETPADVLAIEAGGHFTGRYFVLLGHLSPLDGVGP
HHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCCCCCEEEEEEECCCCCCCCCH
EELGLALLERHLASGDVSELILATNPTVEGEATAHFIADMARRHKVMISRIAHGVPVGGE
HHHHHHHHHHHHCCCCHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
LEYVDSTTLALSFNGRLPL
EEEECCEEEEEEECCCCCC
>Mature Secondary Structure
MKFSPLLDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGLKLASALSSAMSDVGHCQSC
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTYTEETLCPICASHKRGSSSTICVVETPADVLAIEAGGHFTGRYFVLLGHLSPLDGVGP
HHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCCCCCEEEEEEECCCCCCCCCH
EELGLALLERHLASGDVSELILATNPTVEGEATAHFIADMARRHKVMISRIAHGVPVGGE
HHHHHHHHHHHHCCCCHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
LEYVDSTTLALSFNGRLPL
EEEECCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA