| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is apt [H]
Identifier: 120598522
GI number: 120598522
Start: 1961062
End: 1961616
Strand: Direct
Name: apt [H]
Synonym: Sputw3181_1705
Alternate gene names: 120598522
Gene position: 1961062-1961616 (Clockwise)
Preceding gene: 120598521
Following gene: 120598523
Centisome position: 41.65
GC content: 43.06
Gene sequence:
>555_bases ATGATGGCTATGAATACAGAAACCTTATCCTTGATAAAGCAAAGCATTAAAACGATTCCGAACTATCCTAAGGAAGGGAT CCTATTTCGCGATGTCACCAGTTTACTTGAGAATGCCGCAGCCTATAAAGCGGCCATCGATTTATTGGTTGAACATTATC GTGGTCAAGGTTTTACCAAAATTGTCGGCACTGAAGCCCGTGGTTTCTTATTTGGTGCACCACTTGCTTTAGAATTAGGC ATTGGTTTTGTGCCCGTTCGTAAACCCGGTAAATTACCCCGAGCGACTATCAGCCAAAGCTATGAACTTGAATATGGTCA CGATAGCCTAGAAATTCATACTGATGCGATTAGCGCAAATGACAAAGTGCTCGTTGTTGACGATTTACTCGCAACCGGTG GTACGATTGAAGCGACGGTAAAACTTATCCGCCAATTAGGTGGTGAAGTGAAAGATGCTGCTTTTGTGATTTCATTACCC GATTTAGGTGGTGAGGCGCGTTTAACGGCATTAGGGCTTGAGTTGGTTAAACTTTGTGAGTTTGAAGGCGAATAA
Upstream 100 bases:
>100_bases AGCTTTGTGCGATTTTTTGCAATTCGTCCACACTCGATGTGGACGTTTTGTTTTATACCGCCAATCTTGGCGAATTGATT AAGTAACTTACTAAGTAAAT
Downstream 100 bases:
>100_bases TTCTTCAGCCAAAGGCGCCTTAGGATAGTTTGATGGCATGTCACACCATGACATGTTATCTTTCAAAGTTCCCGGGGCGC ATGCTCCCATTTTTGTATCA
Product: adenine phosphoribosyltransferase
Products: NA
Alternate protein names: APRT [H]
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MMAMNTETLSLIKQSIKTIPNYPKEGILFRDVTSLLENAAAYKAAIDLLVEHYRGQGFTKIVGTEARGFLFGAPLALELG IGFVPVRKPGKLPRATISQSYELEYGHDSLEIHTDAISANDKVLVVDDLLATGGTIEATVKLIRQLGGEVKDAAFVISLP DLGGEARLTALGLELVKLCEFEGE
Sequences:
>Translated_184_residues MMAMNTETLSLIKQSIKTIPNYPKEGILFRDVTSLLENAAAYKAAIDLLVEHYRGQGFTKIVGTEARGFLFGAPLALELG IGFVPVRKPGKLPRATISQSYELEYGHDSLEIHTDAISANDKVLVVDDLLATGGTIEATVKLIRQLGGEVKDAAFVISLP DLGGEARLTALGLELVKLCEFEGE >Mature_184_residues MMAMNTETLSLIKQSIKTIPNYPKEGILFRDVTSLLENAAAYKAAIDLLVEHYRGQGFTKIVGTEARGFLFGAPLALELG IGFVPVRKPGKLPRATISQSYELEYGHDSLEIHTDAISANDKVLVVDDLLATGGTIEATVKLIRQLGGEVKDAAFVISLP DLGGEARLTALGLELVKLCEFEGE
Specific function: Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis [H]
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI4502171, Length=169, Percent_Identity=43.7869822485207, Blast_Score=143, Evalue=7e-35, Organism=Homo sapiens, GI71773201, Length=133, Percent_Identity=47.3684210526316, Blast_Score=126, Evalue=1e-29, Organism=Escherichia coli, GI1786675, Length=183, Percent_Identity=68.8524590163934, Blast_Score=250, Evalue=5e-68, Organism=Caenorhabditis elegans, GI17509087, Length=164, Percent_Identity=43.2926829268293, Blast_Score=133, Evalue=5e-32, Organism=Saccharomyces cerevisiae, GI6323619, Length=164, Percent_Identity=43.2926829268293, Blast_Score=121, Evalue=8e-29, Organism=Saccharomyces cerevisiae, GI6320649, Length=173, Percent_Identity=35.8381502890173, Blast_Score=94, Evalue=2e-20, Organism=Drosophila melanogaster, GI17136334, Length=173, Percent_Identity=44.5086705202312, Blast_Score=132, Evalue=1e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005764 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.7 [H]
Molecular weight: Translated: 19845; Mature: 19845
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAMNTETLSLIKQSIKTIPNYPKEGILFRDVTSLLENAAAYKAAIDLLVEHYRGQGFTK CCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE IVGTEARGFLFGAPLALELGIGFVPVRKPGKLPRATISQSYELEYGHDSLEIHTDAISAN EECCCCCCEEEECCEEEECCCCEEECCCCCCCCHHHHCCCEEEEECCCCEEEEEEEECCC DKVLVVDDLLATGGTIEATVKLIRQLGGEVKDAAFVISLPDLGGEARLTALGLELVKLCE CCEEEEEHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH FEGE CCCC >Mature Secondary Structure MMAMNTETLSLIKQSIKTIPNYPKEGILFRDVTSLLENAAAYKAAIDLLVEHYRGQGFTK CCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE IVGTEARGFLFGAPLALELGIGFVPVRKPGKLPRATISQSYELEYGHDSLEIHTDAISAN EECCCCCCEEEECCEEEECCCCEEECCCCCCCCHHHHCCCEEEEECCCCEEEEEEEECCC DKVLVVDDLLATGGTIEATVKLIRQLGGEVKDAAFVISLPDLGGEARLTALGLELVKLCE CCEEEEEHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH FEGE CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA