| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is cheV [H]
Identifier: 120598506
GI number: 120598506
Start: 1946371
End: 1947315
Strand: Direct
Name: cheV [H]
Synonym: Sputw3181_1689
Alternate gene names: 120598506
Gene position: 1946371-1947315 (Clockwise)
Preceding gene: 120598505
Following gene: 120598509
Centisome position: 41.34
GC content: 42.43
Gene sequence:
>945_bases ATGGCAAACGTATTGGCAACCGTAGATCAACGTACCAAACTCGTTGGTGAAAATCGGCTTGAATTACTGCTTTTTCGTAT AAATTCCACGCAGCTATTTGCCATTAATGTGTTCAAAGTGAAAGAGGTGGTAAAACTTCCGCCCCTTAATGCCATGCCAG GCAGCCATCCGCATATATTTGGTGTTGCAAACATTCGCGGTATATCCATTCCTGTCATTGATTTACGTTCTGCTATTGGT TTTAAGCCTGTTGCTCCAGGTGATGATGCTAATATGATCATCACCGAATATAACCGCAGTGTTCAAGGTTTCTTAGTGGG CAAGGTAGAACATATCATCAACATGACATGGAGCGACATTATGCCGCCGCCTAAAATGGCTGGACGGAATAATTATCTGA CGGCAATTACCCGCATTGAGCACCAAGGCCAGTCGCAATTAGTGTCGATTATTGACGTAGAGAAAGTGCTGGCGGAGATC ATTCACTACGATATTAGGCTTTCTGAGGGTGTACTTGACGAAACCTTAGTCCATGAAATGCCTGGGCGTAAGATTTTGAT TGTAGATGATTCTTCAACGGCAAGACGCCAGGTTCGCGAGACGTTAGGTCAACTCGGTATTGAAATCATTGAGGCTTCCG ATGGTTTGCAAGCATTACAGTTATTGCAAAAATGGCGTGATGAAGGGAAGCAGATCTCAAAAGAATTATTGATGATGATT ACCGATGCCGAAATGCCTGAAATGGACGGTTATAAACTCACCCATGAAGTCCGCAGCGATAAAGCAATGGCGGATTTATT TATTACGCTAAATACTTCGCTTAGTGGTAGTTTTAACCATGCTATGGTTGAAAAGGTTGGATGCGATCGTTTTATTTCAA AATTCCAACCCGATCTGTTAGTGGAAGTGGTTCAGGAAAGATTAAGACAAATTATTGCGCAATAA
Upstream 100 bases:
>100_bases GACTTTTAGCATAGTTCTCACGGTGAGTTTGCCGCTATAATTTAGCCAAGTTCGTCGCATGCGATGAAAGTATTTTCCTC CACATTAGAGAAGCAGCATT
Downstream 100 bases:
>100_bases ATGTTTCGTTCCTTTGTTGAAGTTTGTTTAGTGGATTAATTTACCATTAAGTTAGCAAGAGATAGTCCGGTCTTGTCGCC TTGAACCATCGCGTTATATC
Product: putative CheW protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MANVLATVDQRTKLVGENRLELLLFRINSTQLFAINVFKVKEVVKLPPLNAMPGSHPHIFGVANIRGISIPVIDLRSAIG FKPVAPGDDANMIITEYNRSVQGFLVGKVEHIINMTWSDIMPPPKMAGRNNYLTAITRIEHQGQSQLVSIIDVEKVLAEI IHYDIRLSEGVLDETLVHEMPGRKILIVDDSSTARRQVRETLGQLGIEIIEASDGLQALQLLQKWRDEGKQISKELLMMI TDAEMPEMDGYKLTHEVRSDKAMADLFITLNTSLSGSFNHAMVEKVGCDRFISKFQPDLLVEVVQERLRQIIAQ
Sequences:
>Translated_314_residues MANVLATVDQRTKLVGENRLELLLFRINSTQLFAINVFKVKEVVKLPPLNAMPGSHPHIFGVANIRGISIPVIDLRSAIG FKPVAPGDDANMIITEYNRSVQGFLVGKVEHIINMTWSDIMPPPKMAGRNNYLTAITRIEHQGQSQLVSIIDVEKVLAEI IHYDIRLSEGVLDETLVHEMPGRKILIVDDSSTARRQVRETLGQLGIEIIEASDGLQALQLLQKWRDEGKQISKELLMMI TDAEMPEMDGYKLTHEVRSDKAMADLFITLNTSLSGSFNHAMVEKVGCDRFISKFQPDLLVEVVQERLRQIIAQ >Mature_313_residues ANVLATVDQRTKLVGENRLELLLFRINSTQLFAINVFKVKEVVKLPPLNAMPGSHPHIFGVANIRGISIPVIDLRSAIGF KPVAPGDDANMIITEYNRSVQGFLVGKVEHIINMTWSDIMPPPKMAGRNNYLTAITRIEHQGQSQLVSIIDVEKVLAEII HYDIRLSEGVLDETLVHEMPGRKILIVDDSSTARRQVRETLGQLGIEIIEASDGLQALQLLQKWRDEGKQISKELLMMIT DAEMPEMDGYKLTHEVRSDKAMADLFITLNTSLSGSFNHAMVEKVGCDRFISKFQPDLLVEVVQERLRQIIAQ
Specific function: Chemotaxis involves both a phosphorylation-dependent excitation and a methylation-dependent adaptation. CheV and CheW function together to couple CheA activation to methyl-accepting chemotaxis protein receptor status and possible CheA-dependent phosphoryl
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 - InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF01584 CheW; PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 35229; Mature: 35097
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: PS50851 CHEW ; PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANVLATVDQRTKLVGENRLELLLFRINSTQLFAINVFKVKEVVKLPPLNAMPGSHPHIF CCCHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEHHHHHHHHHCCCCCCCCCCCCEEE GVANIRGISIPVIDLRSAIGFKPVAPGDDANMIITEYNRSVQGFLVGKVEHIINMTWSDI EEECCCCCEEEHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCHHHC MPPPKMAGRNNYLTAITRIEHQGQSQLVSIIDVEKVLAEIIHYDIRLSEGVLDETLVHEM CCCCCCCCCCCCEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC PGRKILIVDDSSTARRQVRETLGQLGIEIIEASDGLQALQLLQKWRDEGKQISKELLMMI CCCEEEEEECCHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH TDAEMPEMDGYKLTHEVRSDKAMADLFITLNTSLSGSFNHAMVEKVGCDRFISKFQPDLL CCCCCCCCCCEEHHHHHHCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHH VEVVQERLRQIIAQ HHHHHHHHHHHHCC >Mature Secondary Structure ANVLATVDQRTKLVGENRLELLLFRINSTQLFAINVFKVKEVVKLPPLNAMPGSHPHIF CCHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEHHHHHHHHHCCCCCCCCCCCCEEE GVANIRGISIPVIDLRSAIGFKPVAPGDDANMIITEYNRSVQGFLVGKVEHIINMTWSDI EEECCCCCEEEHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCHHHC MPPPKMAGRNNYLTAITRIEHQGQSQLVSIIDVEKVLAEIIHYDIRLSEGVLDETLVHEM CCCCCCCCCCCCEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC PGRKILIVDDSSTARRQVRETLGQLGIEIIEASDGLQALQLLQKWRDEGKQISKELLMMI CCCEEEEEECCHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH TDAEMPEMDGYKLTHEVRSDKAMADLFITLNTSLSGSFNHAMVEKVGCDRFISKFQPDLL CCCCCCCCCCEEHHHHHHCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHH VEVVQERLRQIIAQ HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8169223; 9384377; 8169224 [H]