| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is 120598467
Identifier: 120598467
GI number: 120598467
Start: 1891523
End: 1891789
Strand: Direct
Name: 120598467
Synonym: Sputw3181_1650
Alternate gene names: NA
Gene position: 1891523-1891789 (Clockwise)
Preceding gene: 120598466
Following gene: 120598468
Centisome position: 40.17
GC content: 38.58
Gene sequence:
>267_bases ATGGGTTTTGAAAATAACGAAAAAGCAAAAGGCTACTGGCGCGAGAATTTACGTCTCGTCCTTAGCTTATTAGCTATTTG GGCCGCAGTATCATTTGGGTGCGGTATTTTATTGGTTGATGTTCTGAATGAAATCCATTTCATGGGATTCAGATTAGGTT TCTGGTTTGCACAACAGGGAGCTATGTATGTATTCGTTGTGCTTATTTTTGTCTATGCGGCAAAAGCCAACGCCTTAGAT AAAAAATATAACGTACAAGAAGACTAA
Upstream 100 bases:
>100_bases TGTTTTGAATCACGACTTAGACGAAAGTCGTGATTGTGCTCACACCAGCGATTGCTAGATTAAACATGACTTAAAATTAA AACAGCACAGGGGAGTCGCT
Downstream 100 bases:
>100_bases GGGGAATTGGAATGGGTGTTCAAGGATTAACGTATCTTATCGTAGGGCTTTCATTTGCGCTCTACATCGGGATTGCAATT TGGTCACGTGCGGGTTCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MGFENNEKAKGYWRENLRLVLSLLAIWAAVSFGCGILLVDVLNEIHFMGFRLGFWFAQQGAMYVFVVLIFVYAAKANALD KKYNVQED
Sequences:
>Translated_88_residues MGFENNEKAKGYWRENLRLVLSLLAIWAAVSFGCGILLVDVLNEIHFMGFRLGFWFAQQGAMYVFVVLIFVYAAKANALD KKYNVQED >Mature_87_residues GFENNEKAKGYWRENLRLVLSLLAIWAAVSFGCGILLVDVLNEIHFMGFRLGFWFAQQGAMYVFVVLIFVYAAKANALDK KYNVQED
Specific function: Unknown
COG id: COG4327
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10084; Mature: 9953
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFENNEKAKGYWRENLRLVLSLLAIWAAVSFGCGILLVDVLNEIHFMGFRLGFWFAQQG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC AMYVFVVLIFVYAAKANALDKKYNVQED HHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure GFENNEKAKGYWRENLRLVLSLLAIWAAVSFGCGILLVDVLNEIHFMGFRLGFWFAQQG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC AMYVFVVLIFVYAAKANALDKKYNVQED HHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA