Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120598346

Identifier: 120598346

GI number: 120598346

Start: 1734544

End: 1734861

Strand: Direct

Name: 120598346

Synonym: Sputw3181_1528

Alternate gene names: NA

Gene position: 1734544-1734861 (Clockwise)

Preceding gene: 120598345

Following gene: 120598347

Centisome position: 36.84

GC content: 46.23

Gene sequence:

>318_bases
ATGGAAGAACGTAAGTGTTTAGTTGCTGGTGGAAATCTGTTACAGGCCCACACGTGGAAAGGACTTTTAGAAGCTTGTGG
TATCCATGTTGAGTTACGTGGTGAAGCGTTATTAGGCGGTATCGGTGAGTTGCCAGCGGATATGCATAATGTGGAGTTGT
GGGTTGGTGAGTCCCAATATATGCTGGCAAAGGCACAATTAACGGCACTGGATGTGGTGAGCCCGCAATGGCAGTGTGTG
CAATGCCATGAGTTAAACGATGGTAATTTTGAATTATGTTGGCAATGCAGCTCTGAACGCAGTGAAAGCCACAATTAG

Upstream 100 bases:

>100_bases
TTAACAACTGATGTAAAAAACAGCACTCGACAGGCTCGGCTATTTAGCAGTAGGATGTCGGCACCCCGTATTCTTGATAG
TGGTAGCAGTAGGATGTCGC

Downstream 100 bases:

>100_bases
TCAGTGATCGAATATTTTCTTCTTCATATCCTATGCTAAAACCCAGTGTTATCATCTGATTGGGTATCATTACCCAATGG
CAGCCCATATACACAAGATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MEERKCLVAGGNLLQAHTWKGLLEACGIHVELRGEALLGGIGELPADMHNVELWVGESQYMLAKAQLTALDVVSPQWQCV
QCHELNDGNFELCWQCSSERSESHN

Sequences:

>Translated_105_residues
MEERKCLVAGGNLLQAHTWKGLLEACGIHVELRGEALLGGIGELPADMHNVELWVGESQYMLAKAQLTALDVVSPQWQCV
QCHELNDGNFELCWQCSSERSESHN
>Mature_105_residues
MEERKCLVAGGNLLQAHTWKGLLEACGIHVELRGEALLGGIGELPADMHNVELWVGESQYMLAKAQLTALDVVSPQWQCV
QCHELNDGNFELCWQCSSERSESHN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11662; Mature: 11662

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS01358 ZF_RANBP2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
5.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEERKCLVAGGNLLQAHTWKGLLEACGIHVELRGEALLGGIGELPADMHNVELWVGESQY
CCCCEEEEECCCEEEEHHHHHHHHHCCEEEEEECCEEECCCCCCCCCCCEEEEEECCCCE
MLAKAQLTALDVVSPQWQCVQCHELNDGNFELCWQCSSERSESHN
EEEEEEEEEEECCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure
MEERKCLVAGGNLLQAHTWKGLLEACGIHVELRGEALLGGIGELPADMHNVELWVGESQY
CCCCEEEEECCCEEEEHHHHHHHHHCCEEEEEECCEEECCCCCCCCCCCEEEEEECCCCE
MLAKAQLTALDVVSPQWQCVQCHELNDGNFELCWQCSSERSESHN
EEEEEEEEEEECCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA