Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is fliJ [C]

Identifier: 120598254

GI number: 120598254

Start: 1619061

End: 1619504

Strand: Direct

Name: fliJ [C]

Synonym: Sputw3181_1431

Alternate gene names: 120598254

Gene position: 1619061-1619504 (Clockwise)

Preceding gene: 120598253

Following gene: 120598255

Centisome position: 34.39

GC content: 42.34

Gene sequence:

>444_bases
ATGGCGAATGCAGATCCCTTATTACTGGTACTTAATTTAGCGCTTGATGCTGAAGAGCAAGCTTCGCTCCTACTGAAATC
GGCCCAATTAGAATGTCAAAAACGCCAACATCAGCTCAATGCCTTAAACAACTATCGTTTAGATTACATGAAGCAAATGC
AGTCTCAGCAAGGTCAAGCGATTAGCGCAAGTCATTATCACCAATTTCATCGTTTTATTCGTCAGATTGATGATGCCATA
GCCCAACAAAACCGGGTGGTGGCTGATGGCGAGAAGCAAAAAGAGTATCGTCAGCACCATTGGCTAGAAAAACAAAAGAA
GCGCAAGGCAGTTGAACTGCTTCTCGCTAATAAAGCGAAAAAACGTGATGCATTAGAATTGAAAAGAGAGCAGAAAATGA
CCGATGAGTTTGCATCTCAACAGTGTTACCGCCGACATAAATAG

Upstream 100 bases:

>100_bases
ATGCCTTCTTAAGGCAAACCATGCGTGATGCCTTTAGCTTTGCAGATAGTCAATCGATGCTGGCTCAACTCGCTGCACAG
TGTAAATAATCGAGGCCATG

Downstream 100 bases:

>100_bases
CCTGTATTTGCGCCGATACGCGCTTTCGTAAATCTTGTTAACTATCATATAACTTTCGTGTTGGCATTTTATTTGCTTAA
CTTCATACACAACATTGCTG

Product: flagellar export protein FliJ

Products: NA

Alternate protein names: Flagellar Biosynthesis Chaperone; Flagellar Protein FliJ; Flagellar Protein; Flagellar Biosynthesis Chaperone FliJ; Flagellar Export FliJ

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MANADPLLLVLNLALDAEEQASLLLKSAQLECQKRQHQLNALNNYRLDYMKQMQSQQGQAISASHYHQFHRFIRQIDDAI
AQQNRVVADGEKQKEYRQHHWLEKQKKRKAVELLLANKAKKRDALELKREQKMTDEFASQQCYRRHK

Sequences:

>Translated_147_residues
MANADPLLLVLNLALDAEEQASLLLKSAQLECQKRQHQLNALNNYRLDYMKQMQSQQGQAISASHYHQFHRFIRQIDDAI
AQQNRVVADGEKQKEYRQHHWLEKQKKRKAVELLLANKAKKRDALELKREQKMTDEFASQQCYRRHK
>Mature_146_residues
ANADPLLLVLNLALDAEEQASLLLKSAQLECQKRQHQLNALNNYRLDYMKQMQSQQGQAISASHYHQFHRFIRQIDDAIA
QQNRVVADGEKQKEYRQHHWLEKQKKRKAVELLLANKAKKRDALELKREQKMTDEFASQQCYRRHK

Specific function: The Flij Protein Is A Flagellar Protein That Affects Chemotactic Events. Mutations In Flij Results In Failure To Respond To Chemotactic Stimuli. [C]

COG id: COG2882

COG function: function code NUO; Flagellar biosynthesis chaperone

Gene ontology:

Cell location: Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17409; Mature: 17278

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANADPLLLVLNLALDAEEQASLLLKSAQLECQKRQHQLNALNNYRLDYMKQMQSQQGQA
CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ISASHYHQFHRFIRQIDDAIAQQNRVVADGEKQKEYRQHHWLEKQKKRKAVELLLANKAK
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRDALELKREQKMTDEFASQQCYRRHK
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ANADPLLLVLNLALDAEEQASLLLKSAQLECQKRQHQLNALNNYRLDYMKQMQSQQGQA
CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ISASHYHQFHRFIRQIDDAIAQQNRVVADGEKQKEYRQHHWLEKQKKRKAVELLLANKAK
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRDALELKREQKMTDEFASQQCYRRHK
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA