| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is fliJ [C]
Identifier: 120598254
GI number: 120598254
Start: 1619061
End: 1619504
Strand: Direct
Name: fliJ [C]
Synonym: Sputw3181_1431
Alternate gene names: 120598254
Gene position: 1619061-1619504 (Clockwise)
Preceding gene: 120598253
Following gene: 120598255
Centisome position: 34.39
GC content: 42.34
Gene sequence:
>444_bases ATGGCGAATGCAGATCCCTTATTACTGGTACTTAATTTAGCGCTTGATGCTGAAGAGCAAGCTTCGCTCCTACTGAAATC GGCCCAATTAGAATGTCAAAAACGCCAACATCAGCTCAATGCCTTAAACAACTATCGTTTAGATTACATGAAGCAAATGC AGTCTCAGCAAGGTCAAGCGATTAGCGCAAGTCATTATCACCAATTTCATCGTTTTATTCGTCAGATTGATGATGCCATA GCCCAACAAAACCGGGTGGTGGCTGATGGCGAGAAGCAAAAAGAGTATCGTCAGCACCATTGGCTAGAAAAACAAAAGAA GCGCAAGGCAGTTGAACTGCTTCTCGCTAATAAAGCGAAAAAACGTGATGCATTAGAATTGAAAAGAGAGCAGAAAATGA CCGATGAGTTTGCATCTCAACAGTGTTACCGCCGACATAAATAG
Upstream 100 bases:
>100_bases ATGCCTTCTTAAGGCAAACCATGCGTGATGCCTTTAGCTTTGCAGATAGTCAATCGATGCTGGCTCAACTCGCTGCACAG TGTAAATAATCGAGGCCATG
Downstream 100 bases:
>100_bases CCTGTATTTGCGCCGATACGCGCTTTCGTAAATCTTGTTAACTATCATATAACTTTCGTGTTGGCATTTTATTTGCTTAA CTTCATACACAACATTGCTG
Product: flagellar export protein FliJ
Products: NA
Alternate protein names: Flagellar Biosynthesis Chaperone; Flagellar Protein FliJ; Flagellar Protein; Flagellar Biosynthesis Chaperone FliJ; Flagellar Export FliJ
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MANADPLLLVLNLALDAEEQASLLLKSAQLECQKRQHQLNALNNYRLDYMKQMQSQQGQAISASHYHQFHRFIRQIDDAI AQQNRVVADGEKQKEYRQHHWLEKQKKRKAVELLLANKAKKRDALELKREQKMTDEFASQQCYRRHK
Sequences:
>Translated_147_residues MANADPLLLVLNLALDAEEQASLLLKSAQLECQKRQHQLNALNNYRLDYMKQMQSQQGQAISASHYHQFHRFIRQIDDAI AQQNRVVADGEKQKEYRQHHWLEKQKKRKAVELLLANKAKKRDALELKREQKMTDEFASQQCYRRHK >Mature_146_residues ANADPLLLVLNLALDAEEQASLLLKSAQLECQKRQHQLNALNNYRLDYMKQMQSQQGQAISASHYHQFHRFIRQIDDAIA QQNRVVADGEKQKEYRQHHWLEKQKKRKAVELLLANKAKKRDALELKREQKMTDEFASQQCYRRHK
Specific function: The Flij Protein Is A Flagellar Protein That Affects Chemotactic Events. Mutations In Flij Results In Failure To Respond To Chemotactic Stimuli. [C]
COG id: COG2882
COG function: function code NUO; Flagellar biosynthesis chaperone
Gene ontology:
Cell location: Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17409; Mature: 17278
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANADPLLLVLNLALDAEEQASLLLKSAQLECQKRQHQLNALNNYRLDYMKQMQSQQGQA CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ISASHYHQFHRFIRQIDDAIAQQNRVVADGEKQKEYRQHHWLEKQKKRKAVELLLANKAK CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KRDALELKREQKMTDEFASQQCYRRHK HHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ANADPLLLVLNLALDAEEQASLLLKSAQLECQKRQHQLNALNNYRLDYMKQMQSQQGQA CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ISASHYHQFHRFIRQIDDAIAQQNRVVADGEKQKEYRQHHWLEKQKKRKAVELLLANKAK CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KRDALELKREQKMTDEFASQQCYRRHK HHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA