Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is fliI

Identifier: 120598253

GI number: 120598253

Start: 1617712

End: 1619049

Strand: Direct

Name: fliI

Synonym: Sputw3181_1430

Alternate gene names: 120598253

Gene position: 1617712-1619049 (Clockwise)

Preceding gene: 120598252

Following gene: 120598254

Centisome position: 34.36

GC content: 48.28

Gene sequence:

>1338_bases
ATGCAAAACCGTCAACACCAGCTGCTGAGTAAGTTCCACCAATATATTGATAAAGTACCTCCTTTTCGCGCCGTTGCCAG
TGGGCAATTGGTGCGGGTTGTTGGTCTCACTTTAGAGGCGAGTGGTTGCCGTGCGCCTGTTGGTAGTTTGTGTTCTATCG
AAACCATGGCGGGAGATTTAGTGGCTGAGGTGGTCGGGTTTGATGATGAGTTACTCTATCTTATGCCCATTGAAGAGTTA
CGAGGTGTACTCCCTGGAGCGAGAGTCATTCCACTTGGAGAGCAAACAGGGCTTAAAGTAGGCTTATCTTTATTAGGCCG
TGTACTCGATGGCAATGGTGTTCCTCTTGATGGATTAGGTGCGCTGCAAACCGATCAATATGCACCAAGACATAATTCTG
CCATTAATCCCTTATCTCGCCGTGCAATAACGGAACCCCTTGATGTTGGCGTACGTGCGATTAATGCCATGTTGACCGTT
GGTAAAGGTCAGCGTATGGGACTCTTTGCGGGCTCTGGTGTCGGTAAAAGTGTGCTTCTGGGTATGATGACCCGTGGTAC
TACTGCAGATATTATTGTGGTGGGGTTGGTTGGTGAACGGGGACGAGAAGTTAAAGAATTTATTGAAGAAATTTTGGGTG
AAAAGGGGCGAGCTCGCTCCGTTGTTATTGCGGCTCCGGCGGATACCTCACCCTTAATGCGCCTTCGCGCCTGTGAAACG
TCAACGCGTATCGCTGAGTATTTCCGTGATTTAGGCTATAACGTGTTGTTATTGATGGATAGCTTGACTCGATATGCCCA
AGCGCAGCGGGAAATCGCTTTAGCGGTGGGGGAGCCGCCTGCAACAAAAGGTTATCCACCATCAGTATTTGCTAAATTGC
CCCGTCTTGTCGAACGTGCGGGTAATGGTGGTCCTGGACAGGGATCTATTACGGCGTTTTATACCGTATTGACCGAAGGC
GATGATCAACAAGATCCGATTGCCGATGCATCAAGAGCGATTCTGGATGGCCATATCGTATTATCGCGTGCTCTGGCTGA
TTCGGGGCACTATCCCGCGATTGATATTGAAGCATCAATTAGCCGTGTTGCTCCGATGGTTATTTCTAATGAGCATTTAG
AAGCGATGCGCCGTGTAAAACAAACCTATTCTTTATATCAACAGAATCGAGATTTAATCTCTATTGGCGCCTACGCCCAA
GGTAGTGATCCTCGGATCGATAATGCGATACGTCTGCAACCGGCGATGAATGCCTTCTTAAGGCAAACCATGCGTGATGC
CTTTAGCTTTGCAGATAGTCAATCGATGCTGGCTCAACTCGCTGCACAGTGTAAATAA

Upstream 100 bases:

>100_bases
GATGCCGCAAGAATATCACATCATAATCAGGATGCTGCGGGATCGGAACTTATGCAAACTGAGTCAGATATTGATTCACT
CCAAACGAATGGAGATCAAG

Downstream 100 bases:

>100_bases
TCGAGGCCATGATGGCGAATGCAGATCCCTTATTACTGGTACTTAATTTAGCGCTTGATGCTGAAGAGCAAGCTTCGCTC
CTACTGAAATCGGCCCAATT

Product: flagellum-specific ATP synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MQNRQHQLLSKFHQYIDKVPPFRAVASGQLVRVVGLTLEASGCRAPVGSLCSIETMAGDLVAEVVGFDDELLYLMPIEEL
RGVLPGARVIPLGEQTGLKVGLSLLGRVLDGNGVPLDGLGALQTDQYAPRHNSAINPLSRRAITEPLDVGVRAINAMLTV
GKGQRMGLFAGSGVGKSVLLGMMTRGTTADIIVVGLVGERGREVKEFIEEILGEKGRARSVVIAAPADTSPLMRLRACET
STRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLVERAGNGGPGQGSITAFYTVLTEG
DDQQDPIADASRAILDGHIVLSRALADSGHYPAIDIEASISRVAPMVISNEHLEAMRRVKQTYSLYQQNRDLISIGAYAQ
GSDPRIDNAIRLQPAMNAFLRQTMRDAFSFADSQSMLAQLAAQCK

Sequences:

>Translated_445_residues
MQNRQHQLLSKFHQYIDKVPPFRAVASGQLVRVVGLTLEASGCRAPVGSLCSIETMAGDLVAEVVGFDDELLYLMPIEEL
RGVLPGARVIPLGEQTGLKVGLSLLGRVLDGNGVPLDGLGALQTDQYAPRHNSAINPLSRRAITEPLDVGVRAINAMLTV
GKGQRMGLFAGSGVGKSVLLGMMTRGTTADIIVVGLVGERGREVKEFIEEILGEKGRARSVVIAAPADTSPLMRLRACET
STRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLVERAGNGGPGQGSITAFYTVLTEG
DDQQDPIADASRAILDGHIVLSRALADSGHYPAIDIEASISRVAPMVISNEHLEAMRRVKQTYSLYQQNRDLISIGAYAQ
GSDPRIDNAIRLQPAMNAFLRQTMRDAFSFADSQSMLAQLAAQCK
>Mature_445_residues
MQNRQHQLLSKFHQYIDKVPPFRAVASGQLVRVVGLTLEASGCRAPVGSLCSIETMAGDLVAEVVGFDDELLYLMPIEEL
RGVLPGARVIPLGEQTGLKVGLSLLGRVLDGNGVPLDGLGALQTDQYAPRHNSAINPLSRRAITEPLDVGVRAINAMLTV
GKGQRMGLFAGSGVGKSVLLGMMTRGTTADIIVVGLVGERGREVKEFIEEILGEKGRARSVVIAAPADTSPLMRLRACET
STRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLVERAGNGGPGQGSITAFYTVLTEG
DDQQDPIADASRAILDGHIVLSRALADSGHYPAIDIEASISRVAPMVISNEHLEAMRRVKQTYSLYQQNRDLISIGAYAQ
GSDPRIDNAIRLQPAMNAFLRQTMRDAFSFADSQSMLAQLAAQCK

Specific function: Probable catalytic subunit of a protein translocase for flagellum-specific export, or a proton translocase involved in local circuits at the flagellum [H]

COG id: COG1157

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway ATPase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family [H]

Homologues:

Organism=Homo sapiens, GI32189394, Length=389, Percent_Identity=29.0488431876607, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI50345984, Length=319, Percent_Identity=30.0940438871473, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI4757810, Length=319, Percent_Identity=30.0940438871473, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI19913424, Length=242, Percent_Identity=31.8181818181818, Blast_Score=109, Evalue=4e-24,
Organism=Homo sapiens, GI19913428, Length=323, Percent_Identity=26.0061919504644, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI19913426, Length=322, Percent_Identity=24.8447204968944, Blast_Score=95, Evalue=1e-19,
Organism=Escherichia coli, GI1788251, Length=441, Percent_Identity=61.9047619047619, Blast_Score=491, Evalue=1e-140,
Organism=Escherichia coli, GI1790170, Length=391, Percent_Identity=30.1790281329923, Blast_Score=148, Evalue=6e-37,
Organism=Escherichia coli, GI1790172, Length=293, Percent_Identity=27.6450511945392, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1790217, Length=234, Percent_Identity=26.4957264957265, Blast_Score=63, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI25144756, Length=386, Percent_Identity=29.2746113989637, Blast_Score=146, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI71988080, Length=318, Percent_Identity=29.2452830188679, Blast_Score=117, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI71988063, Length=318, Percent_Identity=29.2452830188679, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17565854, Length=277, Percent_Identity=31.0469314079422, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17510931, Length=317, Percent_Identity=25.8675078864353, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI71988074, Length=313, Percent_Identity=28.1150159744409, Blast_Score=105, Evalue=6e-23,
Organism=Caenorhabditis elegans, GI17570191, Length=320, Percent_Identity=26.25, Blast_Score=103, Evalue=3e-22,
Organism=Saccharomyces cerevisiae, GI6322581, Length=375, Percent_Identity=29.3333333333333, Blast_Score=147, Evalue=4e-36,
Organism=Saccharomyces cerevisiae, GI6319370, Length=337, Percent_Identity=31.1572700296736, Blast_Score=133, Evalue=6e-32,
Organism=Saccharomyces cerevisiae, GI6319603, Length=330, Percent_Identity=28.4848484848485, Blast_Score=113, Evalue=5e-26,
Organism=Saccharomyces cerevisiae, GI6320016, Length=188, Percent_Identity=34.0425531914894, Blast_Score=94, Evalue=3e-20,
Organism=Drosophila melanogaster, GI28574560, Length=350, Percent_Identity=32, Blast_Score=151, Evalue=7e-37,
Organism=Drosophila melanogaster, GI24638766, Length=383, Percent_Identity=28.9817232375979, Blast_Score=150, Evalue=2e-36,
Organism=Drosophila melanogaster, GI24658560, Length=319, Percent_Identity=31.3479623824451, Blast_Score=121, Evalue=8e-28,
Organism=Drosophila melanogaster, GI24583992, Length=242, Percent_Identity=30.1652892561983, Blast_Score=111, Evalue=9e-25,
Organism=Drosophila melanogaster, GI24583988, Length=242, Percent_Identity=30.1652892561983, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24583986, Length=242, Percent_Identity=30.1652892561983, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24583984, Length=242, Percent_Identity=30.1652892561983, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI20129479, Length=231, Percent_Identity=30.7359307359307, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI281361666, Length=323, Percent_Identity=25.3869969040248, Blast_Score=102, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24646341, Length=323, Percent_Identity=25.3869969040248, Blast_Score=102, Evalue=4e-22,
Organism=Drosophila melanogaster, GI17136796, Length=323, Percent_Identity=25.3869969040248, Blast_Score=102, Evalue=4e-22,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR003593
- InterPro:   IPR005714
- InterPro:   IPR020005 [H]

Pfam domain/function: PF00006 ATP-synt_ab [H]

EC number: =3.6.3.14 [H]

Molecular weight: Translated: 47907; Mature: 47907

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNRQHQLLSKFHQYIDKVPPFRAVASGQLVRVVGLTLEASGCRAPVGSLCSIETMAGDL
CCCHHHHHHHHHHHHHHCCCCCHHHHCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHH
VAEVVGFDDELLYLMPIEELRGVLPGARVIPLGEQTGLKVGLSLLGRVLDGNGVPLDGLG
HHHHHCCCCCEEEEEEHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCC
ALQTDQYAPRHNSAINPLSRRAITEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKSVLL
CCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHH
GMMTRGTTADIIVVGLVGERGREVKEFIEEILGEKGRARSVVIAAPADTSPLMRLRACET
HHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHH
STRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLVERA
HHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHC
GNGGPGQGSITAFYTVLTEGDDQQDPIADASRAILDGHIVLSRALADSGHYPAIDIEASI
CCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHH
SRVAPMVISNEHLEAMRRVKQTYSLYQQNRDLISIGAYAQGSDPRIDNAIRLQPAMNAFL
HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEECHHHHHHH
RQTMRDAFSFADSQSMLAQLAAQCK
HHHHHHHHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure
MQNRQHQLLSKFHQYIDKVPPFRAVASGQLVRVVGLTLEASGCRAPVGSLCSIETMAGDL
CCCHHHHHHHHHHHHHHCCCCCHHHHCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHH
VAEVVGFDDELLYLMPIEELRGVLPGARVIPLGEQTGLKVGLSLLGRVLDGNGVPLDGLG
HHHHHCCCCCEEEEEEHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCC
ALQTDQYAPRHNSAINPLSRRAITEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKSVLL
CCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHH
GMMTRGTTADIIVVGLVGERGREVKEFIEEILGEKGRARSVVIAAPADTSPLMRLRACET
HHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHH
STRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLVERA
HHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHC
GNGGPGQGSITAFYTVLTEGDDQQDPIADASRAILDGHIVLSRALADSGHYPAIDIEASI
CCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHH
SRVAPMVISNEHLEAMRRVKQTYSLYQQNRDLISIGAYAQGSDPRIDNAIRLQPAMNAFL
HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEECHHHHHHH
RQTMRDAFSFADSQSMLAQLAAQCK
HHHHHHHHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]