| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is fliI
Identifier: 120598253
GI number: 120598253
Start: 1617712
End: 1619049
Strand: Direct
Name: fliI
Synonym: Sputw3181_1430
Alternate gene names: 120598253
Gene position: 1617712-1619049 (Clockwise)
Preceding gene: 120598252
Following gene: 120598254
Centisome position: 34.36
GC content: 48.28
Gene sequence:
>1338_bases ATGCAAAACCGTCAACACCAGCTGCTGAGTAAGTTCCACCAATATATTGATAAAGTACCTCCTTTTCGCGCCGTTGCCAG TGGGCAATTGGTGCGGGTTGTTGGTCTCACTTTAGAGGCGAGTGGTTGCCGTGCGCCTGTTGGTAGTTTGTGTTCTATCG AAACCATGGCGGGAGATTTAGTGGCTGAGGTGGTCGGGTTTGATGATGAGTTACTCTATCTTATGCCCATTGAAGAGTTA CGAGGTGTACTCCCTGGAGCGAGAGTCATTCCACTTGGAGAGCAAACAGGGCTTAAAGTAGGCTTATCTTTATTAGGCCG TGTACTCGATGGCAATGGTGTTCCTCTTGATGGATTAGGTGCGCTGCAAACCGATCAATATGCACCAAGACATAATTCTG CCATTAATCCCTTATCTCGCCGTGCAATAACGGAACCCCTTGATGTTGGCGTACGTGCGATTAATGCCATGTTGACCGTT GGTAAAGGTCAGCGTATGGGACTCTTTGCGGGCTCTGGTGTCGGTAAAAGTGTGCTTCTGGGTATGATGACCCGTGGTAC TACTGCAGATATTATTGTGGTGGGGTTGGTTGGTGAACGGGGACGAGAAGTTAAAGAATTTATTGAAGAAATTTTGGGTG AAAAGGGGCGAGCTCGCTCCGTTGTTATTGCGGCTCCGGCGGATACCTCACCCTTAATGCGCCTTCGCGCCTGTGAAACG TCAACGCGTATCGCTGAGTATTTCCGTGATTTAGGCTATAACGTGTTGTTATTGATGGATAGCTTGACTCGATATGCCCA AGCGCAGCGGGAAATCGCTTTAGCGGTGGGGGAGCCGCCTGCAACAAAAGGTTATCCACCATCAGTATTTGCTAAATTGC CCCGTCTTGTCGAACGTGCGGGTAATGGTGGTCCTGGACAGGGATCTATTACGGCGTTTTATACCGTATTGACCGAAGGC GATGATCAACAAGATCCGATTGCCGATGCATCAAGAGCGATTCTGGATGGCCATATCGTATTATCGCGTGCTCTGGCTGA TTCGGGGCACTATCCCGCGATTGATATTGAAGCATCAATTAGCCGTGTTGCTCCGATGGTTATTTCTAATGAGCATTTAG AAGCGATGCGCCGTGTAAAACAAACCTATTCTTTATATCAACAGAATCGAGATTTAATCTCTATTGGCGCCTACGCCCAA GGTAGTGATCCTCGGATCGATAATGCGATACGTCTGCAACCGGCGATGAATGCCTTCTTAAGGCAAACCATGCGTGATGC CTTTAGCTTTGCAGATAGTCAATCGATGCTGGCTCAACTCGCTGCACAGTGTAAATAA
Upstream 100 bases:
>100_bases GATGCCGCAAGAATATCACATCATAATCAGGATGCTGCGGGATCGGAACTTATGCAAACTGAGTCAGATATTGATTCACT CCAAACGAATGGAGATCAAG
Downstream 100 bases:
>100_bases TCGAGGCCATGATGGCGAATGCAGATCCCTTATTACTGGTACTTAATTTAGCGCTTGATGCTGAAGAGCAAGCTTCGCTC CTACTGAAATCGGCCCAATT
Product: flagellum-specific ATP synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MQNRQHQLLSKFHQYIDKVPPFRAVASGQLVRVVGLTLEASGCRAPVGSLCSIETMAGDLVAEVVGFDDELLYLMPIEEL RGVLPGARVIPLGEQTGLKVGLSLLGRVLDGNGVPLDGLGALQTDQYAPRHNSAINPLSRRAITEPLDVGVRAINAMLTV GKGQRMGLFAGSGVGKSVLLGMMTRGTTADIIVVGLVGERGREVKEFIEEILGEKGRARSVVIAAPADTSPLMRLRACET STRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLVERAGNGGPGQGSITAFYTVLTEG DDQQDPIADASRAILDGHIVLSRALADSGHYPAIDIEASISRVAPMVISNEHLEAMRRVKQTYSLYQQNRDLISIGAYAQ GSDPRIDNAIRLQPAMNAFLRQTMRDAFSFADSQSMLAQLAAQCK
Sequences:
>Translated_445_residues MQNRQHQLLSKFHQYIDKVPPFRAVASGQLVRVVGLTLEASGCRAPVGSLCSIETMAGDLVAEVVGFDDELLYLMPIEEL RGVLPGARVIPLGEQTGLKVGLSLLGRVLDGNGVPLDGLGALQTDQYAPRHNSAINPLSRRAITEPLDVGVRAINAMLTV GKGQRMGLFAGSGVGKSVLLGMMTRGTTADIIVVGLVGERGREVKEFIEEILGEKGRARSVVIAAPADTSPLMRLRACET STRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLVERAGNGGPGQGSITAFYTVLTEG DDQQDPIADASRAILDGHIVLSRALADSGHYPAIDIEASISRVAPMVISNEHLEAMRRVKQTYSLYQQNRDLISIGAYAQ GSDPRIDNAIRLQPAMNAFLRQTMRDAFSFADSQSMLAQLAAQCK >Mature_445_residues MQNRQHQLLSKFHQYIDKVPPFRAVASGQLVRVVGLTLEASGCRAPVGSLCSIETMAGDLVAEVVGFDDELLYLMPIEEL RGVLPGARVIPLGEQTGLKVGLSLLGRVLDGNGVPLDGLGALQTDQYAPRHNSAINPLSRRAITEPLDVGVRAINAMLTV GKGQRMGLFAGSGVGKSVLLGMMTRGTTADIIVVGLVGERGREVKEFIEEILGEKGRARSVVIAAPADTSPLMRLRACET STRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLVERAGNGGPGQGSITAFYTVLTEG DDQQDPIADASRAILDGHIVLSRALADSGHYPAIDIEASISRVAPMVISNEHLEAMRRVKQTYSLYQQNRDLISIGAYAQ GSDPRIDNAIRLQPAMNAFLRQTMRDAFSFADSQSMLAQLAAQCK
Specific function: Probable catalytic subunit of a protein translocase for flagellum-specific export, or a proton translocase involved in local circuits at the flagellum [H]
COG id: COG1157
COG function: function code NU; Flagellar biosynthesis/type III secretory pathway ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATPase alpha/beta chains family [H]
Homologues:
Organism=Homo sapiens, GI32189394, Length=389, Percent_Identity=29.0488431876607, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI50345984, Length=319, Percent_Identity=30.0940438871473, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI4757810, Length=319, Percent_Identity=30.0940438871473, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI19913424, Length=242, Percent_Identity=31.8181818181818, Blast_Score=109, Evalue=4e-24, Organism=Homo sapiens, GI19913428, Length=323, Percent_Identity=26.0061919504644, Blast_Score=98, Evalue=2e-20, Organism=Homo sapiens, GI19913426, Length=322, Percent_Identity=24.8447204968944, Blast_Score=95, Evalue=1e-19, Organism=Escherichia coli, GI1788251, Length=441, Percent_Identity=61.9047619047619, Blast_Score=491, Evalue=1e-140, Organism=Escherichia coli, GI1790170, Length=391, Percent_Identity=30.1790281329923, Blast_Score=148, Evalue=6e-37, Organism=Escherichia coli, GI1790172, Length=293, Percent_Identity=27.6450511945392, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1790217, Length=234, Percent_Identity=26.4957264957265, Blast_Score=63, Evalue=3e-11, Organism=Caenorhabditis elegans, GI25144756, Length=386, Percent_Identity=29.2746113989637, Blast_Score=146, Evalue=2e-35, Organism=Caenorhabditis elegans, GI71988080, Length=318, Percent_Identity=29.2452830188679, Blast_Score=117, Evalue=2e-26, Organism=Caenorhabditis elegans, GI71988063, Length=318, Percent_Identity=29.2452830188679, Blast_Score=116, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17565854, Length=277, Percent_Identity=31.0469314079422, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17510931, Length=317, Percent_Identity=25.8675078864353, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI71988074, Length=313, Percent_Identity=28.1150159744409, Blast_Score=105, Evalue=6e-23, Organism=Caenorhabditis elegans, GI17570191, Length=320, Percent_Identity=26.25, Blast_Score=103, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6322581, Length=375, Percent_Identity=29.3333333333333, Blast_Score=147, Evalue=4e-36, Organism=Saccharomyces cerevisiae, GI6319370, Length=337, Percent_Identity=31.1572700296736, Blast_Score=133, Evalue=6e-32, Organism=Saccharomyces cerevisiae, GI6319603, Length=330, Percent_Identity=28.4848484848485, Blast_Score=113, Evalue=5e-26, Organism=Saccharomyces cerevisiae, GI6320016, Length=188, Percent_Identity=34.0425531914894, Blast_Score=94, Evalue=3e-20, Organism=Drosophila melanogaster, GI28574560, Length=350, Percent_Identity=32, Blast_Score=151, Evalue=7e-37, Organism=Drosophila melanogaster, GI24638766, Length=383, Percent_Identity=28.9817232375979, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI24658560, Length=319, Percent_Identity=31.3479623824451, Blast_Score=121, Evalue=8e-28, Organism=Drosophila melanogaster, GI24583992, Length=242, Percent_Identity=30.1652892561983, Blast_Score=111, Evalue=9e-25, Organism=Drosophila melanogaster, GI24583988, Length=242, Percent_Identity=30.1652892561983, Blast_Score=111, Evalue=1e-24, Organism=Drosophila melanogaster, GI24583986, Length=242, Percent_Identity=30.1652892561983, Blast_Score=111, Evalue=1e-24, Organism=Drosophila melanogaster, GI24583984, Length=242, Percent_Identity=30.1652892561983, Blast_Score=111, Evalue=1e-24, Organism=Drosophila melanogaster, GI20129479, Length=231, Percent_Identity=30.7359307359307, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI281361666, Length=323, Percent_Identity=25.3869969040248, Blast_Score=102, Evalue=4e-22, Organism=Drosophila melanogaster, GI24646341, Length=323, Percent_Identity=25.3869969040248, Blast_Score=102, Evalue=4e-22, Organism=Drosophila melanogaster, GI17136796, Length=323, Percent_Identity=25.3869969040248, Blast_Score=102, Evalue=4e-22,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020003 - InterPro: IPR000194 - InterPro: IPR003593 - InterPro: IPR005714 - InterPro: IPR020005 [H]
Pfam domain/function: PF00006 ATP-synt_ab [H]
EC number: =3.6.3.14 [H]
Molecular weight: Translated: 47907; Mature: 47907
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: PS00152 ATPASE_ALPHA_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNRQHQLLSKFHQYIDKVPPFRAVASGQLVRVVGLTLEASGCRAPVGSLCSIETMAGDL CCCHHHHHHHHHHHHHHCCCCCHHHHCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHH VAEVVGFDDELLYLMPIEELRGVLPGARVIPLGEQTGLKVGLSLLGRVLDGNGVPLDGLG HHHHHCCCCCEEEEEEHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCC ALQTDQYAPRHNSAINPLSRRAITEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKSVLL CCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHH GMMTRGTTADIIVVGLVGERGREVKEFIEEILGEKGRARSVVIAAPADTSPLMRLRACET HHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHH STRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLVERA HHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHC GNGGPGQGSITAFYTVLTEGDDQQDPIADASRAILDGHIVLSRALADSGHYPAIDIEASI CCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHH SRVAPMVISNEHLEAMRRVKQTYSLYQQNRDLISIGAYAQGSDPRIDNAIRLQPAMNAFL HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEECHHHHHHH RQTMRDAFSFADSQSMLAQLAAQCK HHHHHHHHHHCCHHHHHHHHHHHCC >Mature Secondary Structure MQNRQHQLLSKFHQYIDKVPPFRAVASGQLVRVVGLTLEASGCRAPVGSLCSIETMAGDL CCCHHHHHHHHHHHHHHCCCCCHHHHCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHH VAEVVGFDDELLYLMPIEELRGVLPGARVIPLGEQTGLKVGLSLLGRVLDGNGVPLDGLG HHHHHCCCCCEEEEEEHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCC ALQTDQYAPRHNSAINPLSRRAITEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKSVLL CCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHH GMMTRGTTADIIVVGLVGERGREVKEFIEEILGEKGRARSVVIAAPADTSPLMRLRACET HHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHH STRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLVERA HHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHC GNGGPGQGSITAFYTVLTEGDDQQDPIADASRAILDGHIVLSRALADSGHYPAIDIEASI CCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHH SRVAPMVISNEHLEAMRRVKQTYSLYQQNRDLISIGAYAQGSDPRIDNAIRLQPAMNAFL HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEECHHHHHHH RQTMRDAFSFADSQSMLAQLAAQCK HHHHHHHHHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]