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The map label for this gene is fliC [H]

Identifier: 120598240

GI number: 120598240

Start: 1604613

End: 1605434

Strand: Direct

Name: fliC [H]

Synonym: Sputw3181_1417

Alternate gene names: 120598240

Gene position: 1604613-1605434 (Clockwise)

Preceding gene: 120598239

Following gene: 120598241

Centisome position: 34.08

GC content: 42.58

Gene sequence:

>822_bases
ATGGCTATTACAGTTAATACCAACGTGACTTCGATGAAGGCACAGAAAAATTTAAATACATCCAGTAGTGGTTTAGCAAC
CTCTATGGAACGTTTATCGAGTGGTCTGCGTATTAATAGCGCCAAAGATGACGCTGCGGGTTTAGCAATCTCAAACCGTT
TAAATAGTCAAGTGCGGGGCTTAGATGTGGGTATGCGTAATGCAAACGATGCCATTTCTATTGCCCAGATTGCTGAAGGT
GCAATGCAAGAGCAGACTAACATGCTGCAACGTATGCGTGATTTGACTGTACAAGCTGAAAACGGTGCAAATAGTACCGA
TGATTTAGATGCAATACAAAAAGAGATCGATCAATTAGCTGAAGAAATTACTGCCATTGGTGACAGTACCGCTTTTGGTA
ATACTAAACTGATGACAGGGAATTTTTCAGCAGGAAAAACCTTCCAAGTAGGGCACCAAGAAGGTGAAGATATCACTATT
TCCGTTGGTACCAATAATGCTGGGACTTTAATGGTTAGTACATTAGCGATTGCAACTTCAGGTGGCCGCTCTACAGCCCT
CGCAGCCATTGATGCGGCAATTAAAAATATTGATAACCAACGTGCAGCCTTAGGTGCCAAACAGAACCGTTTAGCCTATA
ACATCAGTAACAGTGCTAACACTCAAGCCAACGTTGCCGATGCTAAGAGCCGTATTGTCGATGTCGATTTTGCTAAAGAA
ACATCAGTAATGACGAAAAACCAAGTATTACAACAAACGGGTTCTGCAATGTTAGCGCAGGCTAACCAATTGCCTCAAGT
TGCGCTGTCACTACTGGGATAA

Upstream 100 bases:

>100_bases
GTGATTTTTAGGTGTAATAGCCTAAATGCACTGGTAGTTTCAAGATTGGAAATGGCCAAGCTTCGAAGTCTTGGCAAGAT
ACTTAGAAGAGGAAAATACT

Downstream 100 bases:

>100_bases
TTTACTAAGCAGAACATATCAATACAGGACGTTGCTTTTGCCTACTTTCTTCTAGAAAAAGGAGATATAGTAGGCAAAGT
GTTTTTATATGTTTTTTATG

Product: flagellin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MAITVNTNVTSMKAQKNLNTSSSGLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLDVGMRNANDAISIAQIAEG
AMQEQTNMLQRMRDLTVQAENGANSTDDLDAIQKEIDQLAEEITAIGDSTAFGNTKLMTGNFSAGKTFQVGHQEGEDITI
SVGTNNAGTLMVSTLAIATSGGRSTALAAIDAAIKNIDNQRAALGAKQNRLAYNISNSANTQANVADAKSRIVDVDFAKE
TSVMTKNQVLQQTGSAMLAQANQLPQVALSLLG

Sequences:

>Translated_273_residues
MAITVNTNVTSMKAQKNLNTSSSGLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLDVGMRNANDAISIAQIAEG
AMQEQTNMLQRMRDLTVQAENGANSTDDLDAIQKEIDQLAEEITAIGDSTAFGNTKLMTGNFSAGKTFQVGHQEGEDITI
SVGTNNAGTLMVSTLAIATSGGRSTALAAIDAAIKNIDNQRAALGAKQNRLAYNISNSANTQANVADAKSRIVDVDFAKE
TSVMTKNQVLQQTGSAMLAQANQLPQVALSLLG
>Mature_272_residues
AITVNTNVTSMKAQKNLNTSSSGLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLDVGMRNANDAISIAQIAEGA
MQEQTNMLQRMRDLTVQAENGANSTDDLDAIQKEIDQLAEEITAIGDSTAFGNTKLMTGNFSAGKTFQVGHQEGEDITIS
VGTNNAGTLMVSTLAIATSGGRSTALAAIDAAIKNIDNQRAALGAKQNRLAYNISNSANTQANVADAKSRIVDVDFAKET
SVMTKNQVLQQTGSAMLAQANQLPQVALSLLG

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=177, Percent_Identity=47.4576271186441, Blast_Score=142, Evalue=3e-35,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 28550; Mature: 28419

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAITVNTNVTSMKAQKNLNTSSSGLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRG
CEEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHC
LDVGMRNANDAISIAQIAEGAMQEQTNMLQRMRDLTVQAENGANSTDDLDAIQKEIDQLA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHHHH
EEITAIGDSTAFGNTKLMTGNFSAGKTFQVGHQEGEDITISVGTNNAGTLMVSTLAIATS
HHHHHCCCCCCCCCCEEEECCCCCCCEEEECCCCCCEEEEEECCCCCCEEEEEEEEEEEC
GGRSTALAAIDAAIKNIDNQRAALGAKQNRLAYNISNSANTQANVADAKSRIVDVDFAKE
CCCHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHEEEEECCCH
TSVMTKNQVLQQTGSAMLAQANQLPQVALSLLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AITVNTNVTSMKAQKNLNTSSSGLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRG
EEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHC
LDVGMRNANDAISIAQIAEGAMQEQTNMLQRMRDLTVQAENGANSTDDLDAIQKEIDQLA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHHHH
EEITAIGDSTAFGNTKLMTGNFSAGKTFQVGHQEGEDITISVGTNNAGTLMVSTLAIATS
HHHHHCCCCCCCCCCEEEECCCCCCCEEEECCCCCCEEEEEECCCCCCEEEEEEEEEEEC
GGRSTALAAIDAAIKNIDNQRAALGAKQNRLAYNISNSANTQANVADAKSRIVDVDFAKE
CCCHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHEEEEECCCH
TSVMTKNQVLQQTGSAMLAQANQLPQVALSLLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8996114 [H]