The gene/protein map for NC_008750 is currently unavailable.
Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120598222

Identifier: 120598222

GI number: 120598222

Start: 1588419

End: 1589051

Strand: Direct

Name: 120598222

Synonym: Sputw3181_1399

Alternate gene names: NA

Gene position: 1588419-1589051 (Clockwise)

Preceding gene: 120598218

Following gene: 120598223

Centisome position: 33.74

GC content: 40.28

Gene sequence:

>633_bases
ATGTTAAAACGTGTCATTATTCCCTTAATCCTAATAGTGTTAGGTGGATGCGTTGCTAAATCCGTTGTGCCTCCGAAACC
TAGCTTAGTTGATGGCAATGGCTTGCCGCCAACATCGACGATTAATCATTTAGCTCAGCGAATTGTCACAGAGTTAGTTA
AACAAAATGATGCACTCCGTTCAGATCAACCCATAGTAGTTACAACACCTGTGTTGGTGGGGGATATGAACAACACTAAT
GCAATGGCACAACAGTTACAGCAAGGATTAATGACATCACTGCATAGCTTTCAATTTAATGTTGTAGATTTAAACCTTGG
TGATGGTTTAAGGGTGACGACAAGTGGTGACTTTATTTTGACGCGGGATTGGCAAAAGTTATCAAACAATCTCCCCGTTG
AACATTTAGTCGTATCGACGATGAGCCCCACAACAAATGGCATGGCAATCAATACACGTATTGTTAATGTAAGTAACAAT
CGCGTGGTTTCGGCTTCTCAGACATATGTGACTCAAAAAGAAATGCCCAACTACATGCAACCATCTGAAAAAGTAGTATC
CCAAAATGGCATTTTATATAGGCAAACAGGTTCAGGTATGAATGAAGTACGTGTGTTAGGAGATGGAAAATGA

Upstream 100 bases:

>100_bases
CTGTCTTGGTCTGGTATTTGCATTTGATATTTCCTGTGTTGTAGCTGTGGCCTAATTATCATTTAAATGGCCAAGAATTC
CTTTAGACGAGGTCTGCCCA

Downstream 100 bases:

>100_bases
AACGATACCTCTTACTCGTCGCAGTGCTTTTGTTAAGCGGCTGTGCAACGAAAGACCGATACGTACAGTGGGAAGATGTG
CCGCCACCGAGTTTTCCTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MLKRVIIPLILIVLGGCVAKSVVPPKPSLVDGNGLPPTSTINHLAQRIVTELVKQNDALRSDQPIVVTTPVLVGDMNNTN
AMAQQLQQGLMTSLHSFQFNVVDLNLGDGLRVTTSGDFILTRDWQKLSNNLPVEHLVVSTMSPTTNGMAINTRIVNVSNN
RVVSASQTYVTQKEMPNYMQPSEKVVSQNGILYRQTGSGMNEVRVLGDGK

Sequences:

>Translated_210_residues
MLKRVIIPLILIVLGGCVAKSVVPPKPSLVDGNGLPPTSTINHLAQRIVTELVKQNDALRSDQPIVVTTPVLVGDMNNTN
AMAQQLQQGLMTSLHSFQFNVVDLNLGDGLRVTTSGDFILTRDWQKLSNNLPVEHLVVSTMSPTTNGMAINTRIVNVSNN
RVVSASQTYVTQKEMPNYMQPSEKVVSQNGILYRQTGSGMNEVRVLGDGK
>Mature_210_residues
MLKRVIIPLILIVLGGCVAKSVVPPKPSLVDGNGLPPTSTINHLAQRIVTELVKQNDALRSDQPIVVTTPVLVGDMNNTN
AMAQQLQQGLMTSLHSFQFNVVDLNLGDGLRVTTSGDFILTRDWQKLSNNLPVEHLVVSTMSPTTNGMAINTRIVNVSNN
RVVSASQTYVTQKEMPNYMQPSEKVVSQNGILYRQTGSGMNEVRVLGDGK

Specific function: Unknown

COG id: COG5616

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22833; Mature: 22833

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRVIIPLILIVLGGCVAKSVVPPKPSLVDGNGLPPTSTINHLAQRIVTELVKQNDALR
CCHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
SDQPIVVTTPVLVGDMNNTNAMAQQLQQGLMTSLHSFQFNVVDLNLGDGLRVTTSGDFIL
CCCCEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCEEEEECCCEEE
TRDWQKLSNNLPVEHLVVSTMSPTTNGMAINTRIVNVSNNRVVSASQTYVTQKEMPNYMQ
ECCHHHHHCCCCHHHEEEEECCCCCCCEEEEEEEEEECCCEEEECHHHHHHHHHCCCCCC
PSEKVVSQNGILYRQTGSGMNEVRVLGDGK
HHHHHHHCCCEEEEECCCCCCEEEEEECCC
>Mature Secondary Structure
MLKRVIIPLILIVLGGCVAKSVVPPKPSLVDGNGLPPTSTINHLAQRIVTELVKQNDALR
CCHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
SDQPIVVTTPVLVGDMNNTNAMAQQLQQGLMTSLHSFQFNVVDLNLGDGLRVTTSGDFIL
CCCCEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCEEEEECCCEEE
TRDWQKLSNNLPVEHLVVSTMSPTTNGMAINTRIVNVSNNRVVSASQTYVTQKEMPNYMQ
ECCHHHHHCCCCHHHEEEEECCCCCCCEEEEEEEEEECCCEEEECHHHHHHHHHCCCCCC
PSEKVVSQNGILYRQTGSGMNEVRVLGDGK
HHHHHHHCCCEEEEECCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA